Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu017777.1 Olea europaea HOM05D002866 ORTHO05D008706 1.6e-62 242.7 127 100.0
MSTRG.135 Avicennia marina HOM05D002866 ORTHO05D008706 1.5e-41 172.9 109 82.6
SGA_v2.0_scaffold60G20804 Striga asiatica HOM05D006112 ORTHO05D000096 7.6e-41 170.6 108 80.6
vmacro22347 Vaccinium macrocarpon HOM05D002866 ORTHO05D008706 9.9e-41 170.2 109 80.7
Actinidia13600 Actinidia chinensis HOM05D000164 ORTHO05D000096 1.3e-40 169.9 109 78.0
CSS0049284 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 3.2e-39 165.2 109 78.0
CSS0019630 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 7.1e-39 164.1 109 77.1
Rhsim03G0163000 Rhododendron simsii HOM05D002866 ORTHO05D008706 1.2e-38 163.3 109 77.1
Cc02_g04580 Coffea canephora HOM05D002866 ORTHO05D008706 2.1e-38 162.5 109 77.1
Peaxi162Scf00271g00837 Petunia axillaris HOM05D002866 ORTHO05D008706 2.7e-38 162.2 109 77.1
Atru.chr1.857 Acer truncatum HOM05D002866 ORTHO05D008706 1.0e-37 160.2 108 75.9
Migut.F00510 Erythranthe guttata HOM05D002866 ORTHO05D008706 1.0e-37 160.2 124 66.9
Dinv06581 Davidia involucrata HOM05D002866 ORTHO05D008706 1.3e-37 159.8 109 76.1
Lj3g0011743 Lotus japonicus HOM05D002866 ORTHO05D008706 1.3e-37 159.8 124 65.3
Oeu021695.1 Olea europaea HOM05D002866 ORTHO05D008706 1.3e-37 159.8 109 76.1
Dinv16857 Davidia involucrata HOM05D002866 ORTHO05D000096 1.8e-37 159.5 124 68.5
Potri.004G233400 Populus trichocarpa HOM05D002866 ORTHO05D008706 1.8e-37 159.5 109 75.2
arahy.Tifrunner.gnm1.ann1.E5894Z Arachis hypogaea HOM05D002866 ORTHO05D008706 5.1e-37 157.9 109 72.5
arahy.Tifrunner.gnm1.ann1.J95VX3 Arachis hypogaea HOM05D002866 ORTHO05D008706 5.1e-37 157.9 109 72.5
Ca_19791_v3 Cicer arietinum L. HOM05D002866 ORTHO05D008706 1.1e-36 156.8 124 63.7
Glyma.09G001400 Glycine max HOM05D002866 ORTHO05D008706 2.5e-36 155.6 124 62.9
Glyma.12G241300 Glycine max HOM05D002866 ORTHO05D008706 2.5e-36 155.6 124 62.9
Psat7g229240 Pisum sativum HOM05D002866 ORTHO05D008706 2.5e-36 155.6 124 62.9
Manes.06G132500 Manihot esculenta HOM05D002866 ORTHO05D008706 3.3e-36 155.2 109 71.6
TPR.G4977 Trifolium pratense HOM05D002866 ORTHO05D008706 4.3e-36 154.8 124 62.9
VMungo1127G0600 Vigna mungo HOM05D002866 ORTHO05D008706 4.3e-36 154.8 124 62.9
Cpa.g.sc13.273 Carica papaya HOM05D002866 ORTHO05D008706 5.6e-36 154.5 124 66.1
Medtr4g029530 Medicago truncatula HOM05D002866 ORTHO05D008706 7.4e-36 154.1 124 63.7
Eucgr.K00134 Eucalyptus grandis HOM05D002866 ORTHO05D008706 9.6e-36 153.7 119 68.1
Lsat_1_v5_gn_8_9940 Lactuca sativa HOM05D002866 ORTHO05D008706 9.6e-36 153.7 109 71.6
Lalb_Chr01g0008171 Lupinus albus HOM05D002866 ORTHO05D008706 1.6e-35 152.9 109 68.8
TWI39G0340 Tripterygium wilfordii HOM05D002866 ORTHO05D008706 1.6e-35 152.9 109 68.8
COL.COLO4_14065 Corchorus olitorius HOM05D002866 ORTHO05D008706 2.1e-35 152.5 112 70.5
Duzib205G1859 Durio zibethinus HOM05D002866 ORTHO05D008706 2.1e-35 152.5 109 72.5
Lj1A977T67 Lonicera japonica HOM05D002866 ORTHO05D008706 2.1e-35 152.5 109 73.4
Thecc.03G150500 Theobroma cacao HOM05D002866 ORTHO05D008706 2.1e-35 152.5 109 72.5
Sabra01G0178500 Salix brachista HOM05D002866 ORTHO05D008706 3.7e-35 151.8 109 72.5
unitig_0.g267 Utricularia gibba HOM05D002866 ORTHO05D008706 4.8e-35 151.4 109 71.6
Haze_22176 Corylus avellana HOM05D002866 ORTHO05D008706 6.2e-35 151.0 109 71.6
CiPaw.07G185900 Carya illinoinensis HOM05D002866 ORTHO05D008706 8.1e-35 150.6 110 73.6
Nitab4.5_0002346g0030 Nicotiana tabacum HOM05D002866 ORTHO05D008706 1.4e-34 149.8 109 72.5
Gohir.D12G199800 Gossypium hirsutum HOM05D002866 ORTHO05D008706 1.8e-34 149.4 109 70.6
Gorai.008G215000 Gossypium raimondii HOM05D002866 ORTHO05D008706 1.8e-34 149.4 109 70.6
Lalb_Chr03g0033851 Lupinus albus HOM05D002866 ORTHO05D008706 1.8e-34 149.4 124 60.5
TAR636G1476 Trochodendron aralioides HOM05D002866 ORTHO05D008706 2.4e-34 149.1 113 69.0
Gohir.A12G197200 Gossypium hirsutum HOM05D002866 ORTHO05D008706 4.0e-34 148.3 109 69.7
Solyc03g093430.3 Solanum lycopersicum HOM05D002866 ORTHO05D008706 4.0e-34 148.3 109 72.5
Sopen03g024260 Solanum pennellii HOM05D002866 ORTHO05D008706 4.0e-34 148.3 109 72.5
Cfa013555 Carpinus fangiana HOM05D002866 ORTHO05D008706 9.0e-34 147.1 109 68.8
Hund27168 Selenicereus undatus HOM05D002866 ORTHO05D008706 9.0e-34 147.1 124 61.3
PGSC0003DMG400018852 Solanum tuberosum HOM05D002866 ORTHO05D008706 9.0e-34 147.1 109 71.6
HanXRQChr05g0139511 Helianthus annuus HOM05D002866 ORTHO05D008706 1.5e-33 146.4 104 70.2
TAR629G0107 Trochodendron aralioides HOM05D002866 ORTHO05D008706 4.5e-33 144.8 113 66.4
ClCG07G016890 Citrullus lanatus HOM05D002866 ORTHO05D008706 5.8e-33 144.4 109 69.7
Ciclev10005197m.g Citrus clementina HOM05D002866 ORTHO05D008706 7.6e-33 144.1 108 71.3
FvH4_7g27080 Fragaria vesca HOM05D002866 ORTHO05D008706 1.3e-32 143.3 124 60.5
FAN03G0071 Fragaria x ananassa HOM05D002866 ORTHO05D008706 1.3e-32 143.3 124 60.5
FAN06G0035 Fragaria x ananassa HOM05D002866 ORTHO05D008706 1.3e-32 143.3 124 60.5
FAN06G0893 Fragaria x ananassa HOM05D002866 ORTHO05D008706 1.3e-32 143.3 124 60.5
FAN10G3812 Fragaria x ananassa HOM05D002866 ORTHO05D008706 1.7e-32 142.9 124 60.5
QL09p028565 Quercus lobata HOM05D002866 ORTHO05D008706 1.7e-32 142.9 109 68.8
MELO3C017654.2 Cucumis melo HOM05D002866 ORTHO05D008706 2.2e-32 142.5 109 67.9
THA.LOC104819416 Tarenaya hassleriana HOM05D002866 ORTHO05D008706 2.2e-32 142.5 109 66.1
CAN.G485.11 Capsicum annuum HOM05D002866 ORTHO05D008706 2.9e-32 142.1 110 70.9
FAN01G3021 Fragaria x ananassa HOM05D002866 ORTHO05D008706 2.9e-32 142.1 124 59.7
Ah.07g207580 Amaranthus hybridus HOM05D002866 ORTHO05D008706 3.8e-32 141.7 124 61.3
CsaV3_4G004120 Cucumis sativus L. HOM05D002866 ORTHO05D008706 4.9e-32 141.4 109 67.0
RcHm_v2.0_Chr1g0373901 Rosa chinensis HOM05D002866 ORTHO05D008706 4.9e-32 141.4 109 66.1
CANSAT56G0863 Cannabis sativa HOM05D002866 ORTHO05D008706 6.4e-32 141.0 109 67.9
Nitab4.5_0001267g0040 Nicotiana tabacum HOM05D002866 ORTHO05D008706 6.4e-32 141.0 109 68.8
AT5G61530 Arabidopsis thaliana HOM05D002866 ORTHO05D008706 1.4e-31 139.8 108 65.7
Sed0026429 Sechium edule HOM05D002866 ORTHO05D008706 1.4e-31 139.8 109 67.0
EL10Ac3g05867 Beta vulgaris HOM05D002866 ORTHO05D008706 2.4e-31 139.0 124 59.7
Sp2g24730 Schrenkiella parvula HOM05D002866 ORTHO05D008706 4.2e-31 138.3 108 64.8
AL8G38230 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 7.1e-31 137.5 108 64.8
AUR62002232 Chenopodium quinoa HOM05D002866 ORTHO05D008706 9.3e-31 137.1 109 66.1
CARHR275300 Cardamine hirsuta HOM05D002866 ORTHO05D008706 1.2e-30 136.7 108 63.9
Aqoxy3G02809 Aquilegia oxysepala HOM05D002866 ORTHO05D008706 1.6e-30 136.3 112 65.2
Eucgr.A02912 Eucalyptus grandis HOM05D002866 ORTHO05D008706 2.7e-30 135.6 124 56.5
MD07G1250400 Malus domestica HOM05D002866 ORTHO05D008706 2.7e-30 135.6 124 57.3
BcaNung01432 Brassica carinata HOM05D002866 ORTHO05D008706 3.5e-30 135.2 108 63.9
AUR62015444 Chenopodium quinoa HOM05D002866 ORTHO05D008706 3.5e-30 135.2 109 65.1
Aa31LG11G1890 Aethionema arabicum HOM05D002866 ORTHO05D008706 6.0e-30 134.4 124 57.3
Carub.0008s2222 Capsella rubella HOM05D002866 ORTHO05D008706 7.9e-30 134.0 108 62.0
BcaC04g23445 Brassica carinata HOM05D002866 ORTHO05D008706 1.0e-29 133.7 108 63.0
A09p07320 Brassica napus HOM05D002866 ORTHO05D008706 1.0e-29 133.7 108 63.0
C09p08260 Brassica napus HOM05D002866 ORTHO05D008706 1.0e-29 133.7 108 63.0
BolC9t53736H Brassica oleracea HOM05D002866 ORTHO05D008706 1.0e-29 133.7 108 63.0
BraA09t36387Z Brassica rapa HOM05D002866 ORTHO05D008706 1.0e-29 133.7 108 63.0
Thhalv10005440m.g Eutrema salsugineum HOM05D002866 ORTHO05D008706 1.8e-29 132.9 108 63.0
Nn6g33864 Nelumbo nucifera HOM05D002866 ORTHO05D008706 1.8e-29 132.9 113 63.7
BraA03t13839Z Brassica rapa HOM05D002866 ORTHO05D008706 5.1e-29 131.3 108 62.0
A03p47120 Brassica napus HOM05D002866 ORTHO05D008929 6.7e-29 131.0 108 62.0
C07p45230 Brassica napus HOM05D002866 ORTHO05D008929 6.7e-29 131.0 108 62.0
BolC7t45046H Brassica oleracea HOM05D002866 ORTHO05D008929 6.7e-29 131.0 108 62.0
MBI04_g34101_MAGBIO Magnolia biondii HOM05D002866 ORTHO05D008706 6.7e-29 131.0 116 57.8
CiPaw.08G040800 Carya illinoinensis HOM05D002866 ORTHO05D008706 1.5e-28 129.8 110 64.5
PGR142G0955 Punica granatum HOM05D002866 ORTHO05D008706 1.8e-26 122.9 124 55.6
MD01G1178200 Malus domestica HOM05D002866 ORTHO05D008706 4.0e-26 121.7 120 56.7
ATR0057G110 Amborella trichopoda HOM05D002866 ORTHO05D008706 6.9e-26 120.9 113 59.3
PSO063G2361 Papaver somniferum HOM05D002866 ORTHO05D008706 2.9e-24 115.5 112 55.4
GSVIVG01032273001 Vitis vinifera HOM05D002866 ORTHO05D008706 2.9e-24 115.5 91 63.7
Os07g0486500 Oryza sativa ssp. japonica HOM05D002866 ORTHO05D008706 2.7e-22 109.0 113 54.0
CDE02G3129 Ceratophyllum demersum HOM05D002866 ORTHO05D008706 4.6e-22 108.2 113 52.2
BcaNung07329 Brassica carinata HOM05D002866 ORTHO05D008706 3.9e-21 105.1 84 64.3
Zm00001eb321610 Zea mays HOM05D002866 ORTHO05D008706 2.2e-19 99.4 117 47.9
HPP92_007440 Vanilla planifolia HOM05D002866 ORTHO05D008706 1.1e-18 97.1 115 48.7
Zm00001eb105130 Zea mays HOM05D002866 ORTHO05D008706 3.4e-17 92.0 116 47.4
Prupe.2G274000 Prunus persica HOM05D002866 ORTHO05D008706 1.7e-11 73.2 67 55.2
AagrBONN_evm.TU.Sc2ySwM_368.2292 Anthoceros agrestis HOM05D002866 ORTHO05D008706 5.0e-08 61.6 115 36.5


User provided reference genes

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