Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu017736.2 Olea europaea HOM05D006738 ORTHO05D008191 1.4e-44 182.6 91 100.0
Oeu048220.2 Olea europaea HOM05D006738 ORTHO05D008191 3.5e-24 114.8 86 72.1
SGA_v2.0_scaffold24G10619 Striga asiatica HOM05D006738 ORTHO05D008191 1.8e-20 102.4 90 65.6
Cc10_g09240 Coffea canephora HOM05D006738 ORTHO05D008191 3.8e-18 94.7 88 59.1
Migut.C01346 Erythranthe guttata HOM05D006738 ORTHO05D008191 6.5e-18 94.0 89 58.4
Nitab4.5_0006564g0050 Nicotiana tabacum HOM05D006738 ORTHO05D008191 1.4e-17 92.8 87 59.8
Prupe.1G547300 Prunus persica HOM05D006738 ORTHO05D008191 1.9e-17 92.4 88 58.0
MD15G1400100 Malus domestica HOM05D006738 ORTHO05D008191 2.5e-17 92.0 88 56.8
Solyc06g064810.3 Solanum lycopersicum HOM05D006738 ORTHO05D008191 2.5e-17 92.0 88 60.2
Sopen06g023320 Solanum pennellii HOM05D006738 ORTHO05D008191 2.5e-17 92.0 88 60.2
PGSC0003DMG400005175 Solanum tuberosum HOM05D006738 ORTHO05D008191 7.2e-17 90.5 88 59.1
MD08G1215600 Malus domestica HOM05D006738 ORTHO05D008191 9.3e-17 90.1 88 55.7
unitig_748.g7730 Utricularia gibba HOM05D000331 ORTHO05D003399 2.7e-16 88.6 90 58.9
Dinv41794 Davidia involucrata HOM05D006738 ORTHO05D008191 1.4e-15 86.3 92 54.3
Eucgr.F02960 Eucalyptus grandis HOM05D006738 ORTHO05D008191 3.0e-15 85.1 87 50.6
Lsat_1_v5_gn_5_78501 Lactuca sativa HOM05D006738 ORTHO05D008191 3.0e-15 85.1 88 54.5
Actinidia29399 Actinidia chinensis HOM05D006738 ORTHO05D008191 3.9e-15 84.7 84 53.6
Ah.01g012440 Amaranthus hybridus HOM05D006738 ORTHO05D008191 3.9e-15 84.7 86 51.2
Gorai.009G265500 Gossypium raimondii HOM05D006738 ORTHO05D008191 6.7e-15 84.0 87 51.7
FvH4_5g25840 Fragaria vesca HOM05D006738 ORTHO05D008191 1.5e-14 82.8 91 53.8
FAN18G1689 Fragaria x ananassa HOM05D006738 ORTHO05D008191 1.5e-14 82.8 91 53.8
Gohir.A05G252100 Gossypium hirsutum HOM05D006738 ORTHO05D008191 1.5e-14 82.8 87 50.6
Gohir.D05G253900 Gossypium hirsutum HOM05D006738 ORTHO05D008191 1.5e-14 82.8 87 50.6
Sc20g0004710 Simmondsia chinensis HOM05D006738 ORTHO05D008191 1.5e-14 82.8 89 51.7
HanXRQChr10g0309751 Helianthus annuus HOM05D006738 ORTHO05D008191 1.9e-14 82.4 81 59.3
TWI14G1101 Tripterygium wilfordii HOM05D006738 ORTHO05D008191 1.9e-14 82.4 88 53.4
CANSAT11G1518 Cannabis sativa HOM05D006738 ORTHO05D008191 2.5e-14 82.0 88 52.3
ECA234G1792 Erigeron canadensis HOM05D006738 ORTHO05D008191 2.5e-14 82.0 89 53.9
Nn5g27492 Nelumbo nucifera HOM05D006738 ORTHO05D008191 2.5e-14 82.0 88 53.4
Thecc.08G171800 Theobroma cacao HOM05D006738 ORTHO05D008191 2.5e-14 82.0 92 53.3
Manes.02G195900 Manihot esculenta HOM05D006738 ORTHO05D008191 3.3e-14 81.6 92 51.1
Potri.019G076400 Populus trichocarpa HOM05D006738 ORTHO05D008191 4.3e-14 81.3 89 50.6
Sabra19G0086800 Salix brachista HOM05D006738 ORTHO05D008191 4.3e-14 81.3 89 50.6
CiPaw.04G011300 Carya illinoinensis HOM05D006738 ORTHO05D008191 5.7e-14 80.9 92 50.0
COL.COLO4_24620 Corchorus olitorius HOM05D006738 ORTHO05D008191 9.7e-14 80.1 89 53.9
AUR62032974 Chenopodium quinoa HOM05D006738 ORTHO05D008191 1.3e-13 79.7 92 48.9
FAN04G1736 Fragaria x ananassa HOM05D006738 ORTHO05D008191 1.3e-13 79.7 91 52.7
HPP92_002035 Vanilla planifolia HOM05D006738 ORTHO05D008191 1.3e-13 79.7 82 54.9
FAN08G0599 Fragaria x ananassa HOM05D006738 ORTHO05D008191 1.7e-13 79.3 91 52.7
RcHm_v2.0_Chr7g0216321 Rosa chinensis HOM05D006738 ORTHO05D008191 2.2e-13 79.0 92 52.2
PGR042G2463 Punica granatum HOM05D006738 ORTHO05D008191 3.7e-13 78.2 87 50.6
ATR1089G071 Amborella trichopoda HOM05D006738 ORTHO05D008191 4.8e-13 77.8 83 54.2
Cpa.g.sc21.54 Carica papaya HOM05D006738 ORTHO05D008191 4.8e-13 77.8 85 51.8
AUR62017706 Chenopodium quinoa HOM05D006738 ORTHO05D008191 8.2e-13 77.0 86 50.0
EL10Ac9g22957 Beta vulgaris HOM05D006738 ORTHO05D008191 1.1e-12 76.6 90 50.0
CSS0018644 Camellia sinensis var. sinensis HOM05D006738 ORTHO05D008191 1.1e-12 76.6 90 50.0
CSS0019392 Camellia sinensis var. sinensis HOM05D006738 ORTHO05D008191 1.1e-12 76.6 90 50.0
CiPaw.03G017200 Carya illinoinensis HOM05D006738 ORTHO05D008191 1.4e-12 76.3 90 46.7
QL09p004074 Quercus lobata HOM05D006738 ORTHO05D008191 1.4e-12 76.3 93 48.4
QL09p002987 Quercus lobata HOM05D006738 ORTHO05D008191 2.4e-12 75.5 93 48.4
QL09p004200 Quercus lobata HOM05D006738 ORTHO05D008191 2.4e-12 75.5 93 48.4
Duzib211G0443 Durio zibethinus HOM05D006738 ORTHO05D008191 4.1e-12 74.7 90 47.8
TPR.G34128 Trifolium pratense HOM05D006738 ORTHO05D008191 4.1e-12 74.7 86 51.2
GSVIVG01025906001 Vitis vinifera HOM05D006738 ORTHO05D008191 6.9e-12 73.9 93 45.2
Glyma.01G010600 Glycine max HOM05D006738 ORTHO05D008191 1.2e-11 73.2 85 50.6
QL09p000479 Quercus lobata HOM05D006738 ORTHO05D008191 1.2e-11 73.2 93 47.3
Phvul.002G133500 Phaseolus vulgaris HOM05D006738 ORTHO05D008191 1.5e-11 72.8 82 52.4
VMungo1215G3331 Vigna mungo HOM05D006738 ORTHO05D008191 1.5e-11 72.8 82 51.2
CDE05G2754 Ceratophyllum demersum HOM05D006738 ORTHO05D008191 2.6e-11 72.0 82 51.2
Psat0s2394g0120 Pisum sativum HOM05D006738 ORTHO05D008191 2.6e-11 72.0 83 49.4
QL09p000618 Quercus lobata HOM05D006738 ORTHO05D008191 2.6e-11 72.0 93 46.2
Medtr4g031650 Medicago truncatula HOM05D006738 ORTHO05D008191 3.4e-11 71.6 86 46.5
Lj2A790G37 Lonicera japonica HOM05D006738 ORTHO05D008191 5.9e-11 70.9 64 56.2
Sed0003815 Sechium edule HOM05D006738 ORTHO05D008191 5.9e-11 70.9 90 48.9
Lj3g0020973 Lotus japonicus HOM05D006738 ORTHO05D008191 7.7e-11 70.5 82 48.8
Atru.chr12.822 Acer truncatum HOM05D006738 ORTHO05D008191 1.0e-10 70.1 91 47.3
ClCG08G000640 Citrullus lanatus HOM05D006738 ORTHO05D008191 1.0e-10 70.1 80 53.8
FAN13G2380 Fragaria x ananassa HOM05D006738 ORTHO05D008191 1.0e-10 70.1 74 58.1
MELO3C022198.2 Cucumis melo HOM05D006738 ORTHO05D008191 1.7e-10 69.3 87 51.7
Ciclev10022763m.g Citrus clementina HOM05D006738 ORTHO05D008191 2.2e-10 68.9 92 42.4
DCAR_002119 Daucus carota HOM05D006738 ORTHO05D008191 2.2e-10 68.9 85 47.1
SHI08988 Sapria himalayana HOM05D006738 ORTHO05D008191 2.2e-10 68.9 77 49.4
CsaV3_5G040220 Cucumis sativus L. HOM05D006738 ORTHO05D008191 3.8e-10 68.2 87 50.6
vmacro13762 Vaccinium macrocarpon HOM05D006738 ORTHO05D008191 5.0e-10 67.8 78 48.7
arahy.Tifrunner.gnm1.ann1.WI646Q Arachis hypogaea HOM05D006738 ORTHO05D008191 8.5e-10 67.0 88 46.6
PSO170G3684 Papaver somniferum HOM05D006738 ORTHO05D008191 2.5e-09 65.5 88 45.5
PSO782G5196 Papaver somniferum HOM05D006738 ORTHO05D008191 2.5e-09 65.5 87 43.7
Aqoxy6G00074 Aquilegia oxysepala HOM05D006738 ORTHO05D008191 3.2e-09 65.1 91 42.9
arahy.Tifrunner.gnm1.ann1.67ZQRX Arachis hypogaea HOM05D006738 ORTHO05D008191 3.2e-09 65.1 87 46.0
THA.LOC104815902 Tarenaya hassleriana HOM05D006738 ORTHO05D008191 3.2e-09 65.1 86 43.0
Os08g0112600 Oryza sativa ssp. japonica HOM05D006738 ORTHO05D008191 4.2e-09 64.7 94 41.5
Glyma.09G210500 Glycine max HOM05D006738 ORTHO05D008191 5.5e-09 64.3 96 41.7
Haze_13918 Corylus avellana HOM05D006738 ORTHO05D008191 7.2e-09 63.9 80 48.8
arahy.Tifrunner.gnm1.ann1.H480WY Arachis hypogaea HOM05D006738 ORTHO05D008191 1.2e-08 63.2 87 44.8
Lalb_Chr01g0000011 Lupinus albus HOM05D006738 ORTHO05D008191 1.6e-08 62.8 80 41.2
Aa31LG6G8130 Aethionema arabicum HOM05D000065 ORTHO05D000162 7.9e-08 60.5 83 39.8
BolC6t36356H Brassica oleracea HOM05D006738 ORTHO05D008191 7.9e-08 60.5 87 43.7
CARHR033210 Cardamine hirsuta HOM05D006738 ORTHO05D008191 1.0e-07 60.1 88 43.2
C06p12150 Brassica napus HOM05D006738 ORTHO05D008191 1.8e-07 59.3 87 42.5
Peaxi162Scf00269g01621 Petunia axillaris HOM05D006738 ORTHO05D008191 1.8e-07 59.3 90 41.1
Zm00001eb260580 Zea mays HOM05D006738 ORTHO05D008191 1.8e-07 59.3 93 38.7
BcaC08g43833 Brassica carinata HOM05D006738 ORTHO05D008191 2.3e-07 58.9 87 42.5
A09p32610 Brassica napus HOM05D006738 ORTHO05D008191 2.3e-07 58.9 89 42.7
BraA09t38801Z Brassica rapa HOM05D006738 ORTHO05D008191 2.3e-07 58.9 89 42.7
Carub.0001s3198 Capsella rubella HOM05D006738 ORTHO05D008191 2.3e-07 58.9 90 41.1
Rhsim07G0068100 Rhododendron simsii HOM05D006738 ORTHO05D008191 2.3e-07 58.9 73 46.6
AT1G33810 Arabidopsis thaliana HOM05D006738 ORTHO05D008191 3.0e-07 58.5 89 40.4
BcaB07g33015 Brassica carinata HOM05D006738 ORTHO05D008191 3.9e-07 58.2 87 42.5
Thhalv10009075m.g Eutrema salsugineum HOM05D006738 ORTHO05D008191 3.9e-07 58.2 87 41.4
AL1G48260 Arabidopsis lyrata HOM05D006738 ORTHO05D008191 5.1e-07 57.8 91 42.9
Medtr4g031845 Medicago truncatula HOM05D006738 ORTHO05D008191 8.8e-07 57.0 66 48.5
Sp1g29140 Schrenkiella parvula HOM05D006738 ORTHO05D008191 8.8e-07 57.0 83 38.6


User provided reference genes

Program Settings