Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu017665.1 Olea europaea HOM05D000516 ORTHO05D000409 8.2e-68 260.4 142 100.0
Oeu036537.1 Olea europaea HOM05D000516 ORTHO05D000409 1.7e-17 93.2 109 47.7
SGA_v2.0_scaffold44G16619 Striga asiatica HOM05D000516 ORTHO05D000409 5.5e-16 88.2 97 47.4
SGA_v2.0_scaffold384G50435 Striga asiatica HOM05D000516 ORTHO05D000409 1.6e-15 86.7 102 52.0
PGSC0003DMG400016651 Solanum tuberosum HOM05D000516 ORTHO05D000409 1.0e-14 84.0 87 52.9
SGA_v2.0_scaffold60G20891 Striga asiatica HOM05D000516 ORTHO05D000409 1.8e-14 83.2 105 44.8
Solyc06g049040.4 Solanum lycopersicum HOM05D000516 ORTHO05D000409 3.0e-14 82.4 93 49.5
MSTRG.8376 Avicennia marina HOM05D000516 ORTHO05D000409 8.9e-14 80.9 104 44.2
Sopen07g027590 Solanum pennellii HOM05D000516 ORTHO05D000409 8.9e-14 80.9 95 49.5
Hma1.2p1_0292F.1_g115940 Hydrangea macrophylla HOM05D000516 ORTHO05D000409 4.4e-13 78.6 98 44.9
CAN.G24.12 Capsicum annuum HOM05D000516 ORTHO05D000409 1.7e-12 76.6 104 44.2
Migut.F01247 Erythranthe guttata HOM05D000516 ORTHO05D000409 2.2e-12 76.3 104 44.2
Lsat_1_v5_gn_8_13621 Lactuca sativa HOM05D000516 ORTHO05D000409 2.8e-12 75.9 104 44.2
Solyc06g048630.3 Solanum lycopersicum HOM05D000516 ORTHO05D000409 2.8e-12 75.9 102 44.1
Sopen06g014840 Solanum pennellii HOM05D000516 ORTHO05D000409 2.8e-12 75.9 102 44.1
PGSC0003DMG400027599 Solanum tuberosum HOM05D000516 ORTHO05D000409 2.8e-12 75.9 102 44.1
Lj8C55T5 Lonicera japonica HOM05D000516 ORTHO05D000409 4.9e-12 75.1 104 43.3
Rhsim09G0185600 Rhododendron simsii HOM05D000516 ORTHO05D000409 8.3e-12 74.3 85 47.1
Nitab4.5_0001870g0010 Nicotiana tabacum HOM05D000516 ORTHO05D000409 1.4e-11 73.6 103 45.6
vmacro06889 Vaccinium macrocarpon HOM05D000516 ORTHO05D000409 1.4e-11 73.6 94 45.7
Peaxi162Scf00304g00518 Petunia axillaris HOM05D000516 ORTHO05D000409 1.8e-11 73.2 104 44.2
CAN.G545.4 Capsicum annuum HOM05D000516 ORTHO05D000409 3.1e-11 72.4 104 43.3
Hma1.2p1_2182F.1_g316305 Hydrangea macrophylla HOM05D000516 ORTHO05D000409 5.4e-11 71.6 86 44.2
Hma1.2p1_2182F.1_g316310 Hydrangea macrophylla HOM05D000516 ORTHO05D000409 5.4e-11 71.6 86 44.2
Oeu006053.1 Olea europaea HOM05D000516 ORTHO05D000409 5.4e-11 71.6 102 45.1
Dinv21843 Davidia involucrata HOM05D000516 ORTHO05D000409 1.2e-10 70.5 99 42.4
MELO3C020145.2 Cucumis melo HOM05D000516 ORTHO05D000409 2.0e-10 69.7 95 37.9
CsaV3_5G010910 Cucumis sativus L. HOM05D000516 ORTHO05D000409 4.5e-10 68.6 95 36.8
HanXRQChr07g0203701 Helianthus annuus HOM05D000516 ORTHO05D000409 5.9e-10 68.2 107 39.3
HanXRQChr08g0221531 Helianthus annuus HOM05D000516 ORTHO05D000409 7.8e-10 67.8 112 40.2
Lj1C966G14 Lonicera japonica HOM05D000516 ORTHO05D000409 7.8e-10 67.8 95 45.3
Rhsim03G0151900 Rhododendron simsii HOM05D000516 ORTHO05D000409 7.8e-10 67.8 94 43.6
Oeu054419.1 Olea europaea HOM05D000516 ORTHO05D000409 1.0e-09 67.4 58 55.2
CANSAT56G4430 Cannabis sativa HOM05D000516 ORTHO05D000409 1.7e-09 66.6 90 43.3
MSTRG.8893 Avicennia marina HOM05D000516 ORTHO05D000409 2.3e-09 66.2 102 42.2
Cc02_g05410 Coffea canephora HOM05D000516 ORTHO05D000409 2.3e-09 66.2 137 35.8
unitig_60.g25664 Utricularia gibba HOM05D000516 ORTHO05D000409 2.3e-09 66.2 100 43.0
Lsat_1_v5_gn_9_59881 Lactuca sativa HOM05D000516 ORTHO05D000409 3.8e-09 65.5 112 39.3
Nn5g26856 Nelumbo nucifera HOM05D000516 ORTHO05D000409 6.6e-09 64.7 108 38.0
Actinidia13652 Actinidia chinensis HOM05D000516 ORTHO05D000409 8.6e-09 64.3 91 41.8
Migut.F00604 Erythranthe guttata HOM05D000516 ORTHO05D000409 8.6e-09 64.3 103 42.7
Lsat_1_v5_gn_2_126181 Lactuca sativa HOM05D000516 ORTHO05D000409 8.6e-09 64.3 107 39.3
ClCG07G005090 Citrullus lanatus HOM05D000516 ORTHO05D000409 1.1e-08 63.9 95 36.8
HanXRQChr09g0261991 Helianthus annuus HOM05D000516 ORTHO05D000409 1.1e-08 63.9 76 46.1
CSS0026069 Camellia sinensis var. sinensis HOM05D000516 ORTHO05D000409 1.5e-08 63.5 93 43.0
Manes.10G001100 Manihot esculenta HOM05D000516 ORTHO05D000409 1.5e-08 63.5 101 38.6
Nn2g10316 Nelumbo nucifera HOM05D000516 ORTHO05D000409 1.9e-08 63.2 140 31.4
TAR623G0042 Trochodendron aralioides HOM05D000516 ORTHO05D000409 1.9e-08 63.2 106 37.7
unitig_0.g260 Utricularia gibba HOM05D000516 ORTHO05D000409 1.9e-08 63.2 100 41.0
Eucgr.G03135 Eucalyptus grandis HOM05D000516 ORTHO05D000409 4.3e-08 62.0 109 42.2
MBI15_g08962_MAGBIO Magnolia biondii HOM05D000516 ORTHO05D000409 7.3e-08 61.2 105 39.0
TAR636G2766 Trochodendron aralioides HOM05D000516 ORTHO05D000409 7.3e-08 61.2 111 34.2
Prupe.2G263700 Prunus persica HOM05D000516 ORTHO05D000409 9.5e-08 60.8 93 40.9
ECA238G1336 Erigeron canadensis HOM05D000516 ORTHO05D000409 1.2e-07 60.5 48 54.2
FAN03G0936 Fragaria x ananassa HOM05D000516 ORTHO05D000409 1.6e-07 60.1 94 39.4
Medtr5g075390 Medicago truncatula HOM05D000516 ORTHO05D000409 1.6e-07 60.1 84 46.4
MD01G1167000 Malus domestica HOM05D000516 ORTHO05D000409 2.1e-07 59.7 94 38.3
FvH4_7g25870 Fragaria vesca HOM05D000516 ORTHO05D000409 2.8e-07 59.3 55 52.7
FAN06G1028 Fragaria x ananassa HOM05D000516 ORTHO05D000409 2.8e-07 59.3 55 52.7
Aqoxy2G00695 Aquilegia oxysepala HOM05D000516 ORTHO05D000409 4.7e-07 58.5 67 49.3
ClCG02G019030 Citrullus lanatus HOM05D000516 ORTHO05D000409 4.7e-07 58.5 111 43.2
PSO339G4297 Papaver somniferum HOM05D000516 ORTHO05D000409 4.7e-07 58.5 103 37.9
RcHm_v2.0_Chr1g0372151 Rosa chinensis HOM05D000516 ORTHO05D000409 8.0e-07 57.8 77 44.2
TAR633G1994 Trochodendron aralioides HOM05D000516 ORTHO05D000409 1.0e-06 57.4 47 55.3
Glyma.14G204100 Glycine max HOM05D000516 ORTHO05D000409 1.4e-06 57.0 98 39.8
Psat2g051040 Pisum sativum HOM05D000516 ORTHO05D000409 1.4e-06 57.0 89 43.8
RcHm_v2.0_Chr5g0073151 Rosa chinensis HOM05D000516 ORTHO05D000409 1.4e-06 57.0 93 39.8
EL10Ac7g15851 Beta vulgaris HOM05D000516 ORTHO05D000409 1.8e-06 56.6 102 36.3
Cpa.g.sc19.62 Carica papaya HOM05D000516 ORTHO05D000409 1.8e-06 56.6 106 38.7
FAN10G2188 Fragaria x ananassa HOM05D000516 ORTHO05D000409 1.8e-06 56.6 55 50.9
LjContig00141g0020280 Lotus japonicus HOM05D000516 ORTHO05D000409 1.8e-06 56.6 88 43.2
PSO384G1080 Papaver somniferum HOM05D000516 ORTHO05D000409 1.8e-06 56.6 105 37.1
Phvul.008G247800 Phaseolus vulgaris HOM05D000516 ORTHO05D000409 1.8e-06 56.6 89 43.8
CANSAT54G2132 Cannabis sativa HOM05D000516 ORTHO05D000409 2.3e-06 56.2 112 38.4
FAN01G1084 Fragaria x ananassa HOM05D000516 ORTHO05D000409 2.3e-06 56.2 55 50.9
Zm00001eb016100 Zea mays HOM05D000516 ORTHO05D000409 2.3e-06 56.2 82 41.5
Glyma.02G236200 Glycine max HOM05D000516 ORTHO05D000409 4.0e-06 55.5 119 35.3
VMungo0647G1058 Vigna mungo HOM05D000516 ORTHO05D000409 4.0e-06 55.5 89 43.8
CsaV3_6G013120 Cucumis sativus L. HOM05D000516 ORTHO05D000409 5.2e-06 55.1 114 34.2
Sed0002448 Sechium edule HOM05D000516 ORTHO05D000409 6.8e-06 54.7 91 42.9
AUR62009733 Chenopodium quinoa HOM05D000516 ORTHO05D000409 8.9e-06 54.3 64 43.8
Lalb_Chr17g0345621 Lupinus albus HOM05D000516 ORTHO05D000409 8.9e-06 54.3 100 39.0


User provided reference genes

Program Settings