Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu017634.1 Olea europaea HOM05D000379 ORTHO05D049470 4.5e-30 134.0 72 100.0
Dinv03668 Davidia involucrata HOM05D000379 ORTHO05D000254 2.3e-18 95.1 72 65.3
SalBow8G1165 Salvia bowleyana HOM05D000379 ORTHO05D000254 2.3e-18 95.1 70 65.7
MSTRG.2468 Avicennia marina HOM05D000379 ORTHO05D000254 1.5e-17 92.4 72 62.5
Migut.H02551 Erythranthe guttata HOM05D000379 ORTHO05D000254 2.5e-17 91.7 73 63.0
Lj2A145T65 Lonicera japonica HOM05D000379 ORTHO05D000254 9.7e-17 89.7 51 76.5
Oeu046374.1 Olea europaea HOM05D000379 ORTHO05D000254 9.7e-17 89.7 73 63.0
TAR627G0971 Trochodendron aralioides HOM05D000379 ORTHO05D000254 1.6e-16 89.0 72 59.7
CiPaw.11G105500 Carya illinoinensis HOM05D000379 ORTHO05D000254 2.2e-16 88.6 51 76.5
Sed0018357 Sechium edule HOM05D000379 ORTHO05D000254 2.2e-16 88.6 51 76.5
GSVIVG01019729001 Vitis vinifera HOM05D000379 ORTHO05D000254 2.8e-16 88.2 73 60.3
Cfa010678 Carpinus fangiana HOM05D000379 ORTHO05D000254 3.7e-16 87.8 72 58.3
ClCG01G001170 Citrullus lanatus HOM05D000379 ORTHO05D000254 3.7e-16 87.8 51 74.5
Haze_03603 Corylus avellana HOM05D000379 ORTHO05D000254 3.7e-16 87.8 72 58.3
MELO3C005818.2 Cucumis melo HOM05D000379 ORTHO05D000254 3.7e-16 87.8 51 74.5
CsaV3_5G001290 Cucumis sativus L. HOM05D000379 ORTHO05D000254 3.7e-16 87.8 51 74.5
Hma1.2p1_0436F.1_g152920 Hydrangea macrophylla HOM05D000379 ORTHO05D000254 4.8e-16 87.4 51 74.5
QL02p026461 Quercus lobata HOM05D000379 ORTHO05D000254 4.8e-16 87.4 72 59.7
CiPaw.11G105300 Carya illinoinensis HOM05D000379 ORTHO05D000254 6.3e-16 87.0 51 76.5
vmacro11469 Vaccinium macrocarpon HOM05D000379 ORTHO05D000254 1.1e-15 86.3 51 72.5
Duzib068G0991 Durio zibethinus HOM05D000379 ORTHO05D000254 1.4e-15 85.9 51 70.6
Manes.01G001400 Manihot esculenta HOM05D000379 ORTHO05D000254 1.4e-15 85.9 51 70.6
Actinidia22244 Actinidia chinensis HOM05D000379 ORTHO05D000254 1.8e-15 85.5 51 72.5
PGSC0003DMG400005803 Solanum tuberosum HOM05D000379 ORTHO05D000254 1.8e-15 85.5 53 73.6
PGSC0003DMG400008971 Solanum tuberosum HOM05D000379 ORTHO05D049470 1.8e-15 85.5 53 73.6
Duzib205G0827 Durio zibethinus HOM05D000379 ORTHO05D000254 2.4e-15 85.1 51 70.6
Gohir.A08G107100 Gossypium hirsutum HOM05D000379 ORTHO05D000254 2.4e-15 85.1 51 70.6
Gohir.D08G118100 Gossypium hirsutum HOM05D000379 ORTHO05D000254 2.4e-15 85.1 51 70.6
Gorai.004G126900 Gossypium raimondii HOM05D000379 ORTHO05D000254 2.4e-15 85.1 51 70.6
Thecc.03G212900 Theobroma cacao HOM05D000379 ORTHO05D000254 2.4e-15 85.1 51 70.6
Solyc08g013730.3 Solanum lycopersicum HOM05D000379 ORTHO05D000254 3.1e-15 84.7 53 73.6
Sopen08g004570 Solanum pennellii HOM05D000379 ORTHO05D000254 3.1e-15 84.7 53 73.6
Cc08_g17120 Coffea canephora HOM05D000379 ORTHO05D000254 4.1e-15 84.3 52 71.2
COL.COLO4_14405 Corchorus olitorius HOM05D000379 ORTHO05D000254 5.3e-15 84.0 51 68.6
Peaxi162Scf01257g00026 Petunia axillaris HOM05D000379 ORTHO05D000254 5.3e-15 84.0 55 70.9
Rhsim02G0256100 Rhododendron simsii HOM05D000379 ORTHO05D000254 5.3e-15 84.0 51 68.6
Atru.chr9.2604 Acer truncatum HOM05D000379 ORTHO05D000254 6.9e-15 83.6 53 71.7
Eucgr.D02548 Eucalyptus grandis HOM05D000379 ORTHO05D000254 9.0e-15 83.2 51 70.6
Nitab4.5_0000799g0080 Nicotiana tabacum HOM05D000379 ORTHO05D000254 9.0e-15 83.2 54 68.5
THA.LOC104806473 Tarenaya hassleriana HOM05D000379 ORTHO05D000254 9.0e-15 83.2 51 68.6
CAN.G792.10 Capsicum annuum HOM05D000379 ORTHO05D000254 1.5e-14 82.4 71 59.2
PGR031G0462 Punica granatum HOM05D000379 ORTHO05D000254 1.5e-14 82.4 51 68.6
unitig_60.g25587 Utricularia gibba HOM05D000379 ORTHO05D000254 1.5e-14 82.4 68 60.3
Cpa.g.sc37.127 Carica papaya HOM05D000379 ORTHO05D000254 2.0e-14 82.0 51 70.6
CANSAT25G1570 Cannabis sativa HOM05D000379 ORTHO05D000254 4.5e-14 80.9 51 66.7
FAN04G2009 Fragaria x ananassa HOM05D000379 ORTHO05D000254 4.5e-14 80.9 75 56.0
FAN18G3742 Fragaria x ananassa HOM05D000379 ORTHO05D000254 4.5e-14 80.9 75 56.0
Oeu020545.1 Olea europaea HOM05D000379 ORTHO05D000254 4.5e-14 80.9 52 71.2
unitig_0.g395 Utricularia gibba HOM05D000379 ORTHO05D000254 4.5e-14 80.9 68 54.4
ECA246G3199 Erigeron canadensis HOM05D000379 ORTHO05D000254 1.0e-13 79.7 51 70.6
Lsat_1_v5_gn_3_13220 Lactuca sativa HOM05D000379 ORTHO05D000254 1.3e-13 79.3 52 71.2
HanXRQChr17g0534031 Helianthus annuus HOM05D000379 ORTHO05D000254 2.2e-13 78.6 51 68.6
vmacro00141 Vaccinium macrocarpon HOM05D000379 ORTHO05D000254 2.2e-13 78.6 51 66.7
RcHm_v2.0_Chr7g0188201 Rosa chinensis HOM05D000379 ORTHO05D000254 5.0e-13 77.4 75 56.0
Sabra11G0132100 Salix brachista HOM05D000379 ORTHO05D000254 5.0e-13 77.4 52 67.3
Sed0012481 Sechium edule HOM05D000379 ORTHO05D000254 5.0e-13 77.4 50 68.0
Sabra16G0307800 Salix brachista HOM05D000379 ORTHO05D000254 1.1e-12 76.3 52 65.4
CiPaw.12G073300 Carya illinoinensis HOM05D000379 ORTHO05D000254 1.9e-12 75.5 52 69.2
Potri.001G455000 Populus trichocarpa HOM05D000379 ORTHO05D000254 1.9e-12 75.5 52 65.4
ECA246G4961 Erigeron canadensis HOM05D000379 ORTHO05D000254 2.5e-12 75.1 54 66.7
TWI81G0075 Tripterygium wilfordii HOM05D000379 ORTHO05D000254 3.2e-12 74.7 74 51.4
CSS0037541 Camellia sinensis var. sinensis HOM05D000379 ORTHO05D000254 2.1e-11 72.0 52 63.5
CSS0041534 Camellia sinensis var. sinensis HOM05D000379 ORTHO05D000254 2.1e-11 72.0 52 63.5
MD06G1128200 Malus domestica HOM05D000379 ORTHO05D000254 2.7e-11 71.6 72 50.0
Carub.0006s2902 Capsella rubella HOM05D000379 ORTHO05D000254 3.6e-11 71.2 52 59.6
PSO566G0240 Papaver somniferum HOM05D000379 ORTHO05D000254 3.6e-11 71.2 54 63.0
HanXRQChr17g0534041 Helianthus annuus HOM05D000379 ORTHO05D000254 4.6e-11 70.9 51 66.7
PSO063G1691 Papaver somniferum HOM05D000379 ORTHO05D000254 4.6e-11 70.9 54 64.8
PSO782G2035 Papaver somniferum HOM05D000379 ORTHO05D000254 4.6e-11 70.9 54 64.8
AL6G44270 Arabidopsis lyrata HOM05D000379 ORTHO05D000254 6.1e-11 70.5 52 59.6
AT4G10380 Arabidopsis thaliana HOM05D000379 ORTHO05D000254 6.1e-11 70.5 52 59.6
BcaB05g23902 Brassica carinata HOM05D000379 ORTHO05D000254 7.9e-11 70.1 52 59.6
A02p26590 Brassica napus HOM05D000379 ORTHO05D000254 7.9e-11 70.1 52 59.6
BraA02t07663Z Brassica rapa HOM05D000379 ORTHO05D000254 7.9e-11 70.1 52 59.6
Potri.011G146900 Populus trichocarpa HOM05D000379 ORTHO05D000254 7.9e-11 70.1 52 59.6
MD14G1144100 Malus domestica HOM05D000379 ORTHO05D000254 1.4e-10 69.3 72 50.0
BcaC03g16397 Brassica carinata HOM05D000379 ORTHO05D000254 1.8e-10 68.9 52 57.7
C02p42310 Brassica napus HOM05D000379 ORTHO05D000254 1.8e-10 68.9 52 57.7
Thhalv10028842m.g Eutrema salsugineum HOM05D000379 ORTHO05D000254 1.8e-10 68.9 52 59.6
BolC2t10272H Brassica oleracea HOM05D000379 ORTHO05D000254 3.0e-10 68.2 52 57.7
Lsat_1_v5_gn_3_13280 Lactuca sativa HOM05D000379 ORTHO05D000254 3.9e-10 67.8 53 64.2
CARHR256270 Cardamine hirsuta HOM05D000379 ORTHO05D000254 1.1e-09 66.2 52 55.8
CANSAT21G1903 Cannabis sativa HOM05D000379 ORTHO05D000254 1.5e-09 65.9 56 64.3
DCAR_029982 Daucus carota HOM05D000379 ORTHO05D000254 1.5e-09 65.9 56 60.7
MBI04_g26973_MAGBIO Magnolia biondii HOM05D000379 ORTHO05D000254 1.5e-09 65.9 52 63.5
BcaB01g02753 Brassica carinata HOM05D000379 ORTHO05D000254 2.5e-09 65.1 52 55.8
HPP92_015006 Vanilla planifolia HOM05D000379 ORTHO05D000254 2.5e-09 65.1 52 59.6
Aa31LG9G11650 Aethionema arabicum HOM05D001742 ORTHO05D001689 5.7e-09 63.9 51 54.9
DCAR_002095 Daucus carota HOM05D000379 ORTHO05D000254 5.7e-09 63.9 55 54.5
BcaC01g04678 Brassica carinata HOM05D000379 ORTHO05D000254 7.4e-09 63.5 52 53.8
BraA07t29884Z Brassica rapa HOM05D000379 ORTHO05D000254 7.4e-09 63.5 52 53.8
C03p35010 Brassica napus HOM05D000379 ORTHO05D000254 9.7e-09 63.2 52 53.8
BolC3t15813H Brassica oleracea HOM05D000379 ORTHO05D000254 9.7e-09 63.2 52 53.8
AUR62008039 Chenopodium quinoa HOM05D000379 ORTHO05D000254 9.7e-09 63.2 51 54.9
Cc04_g15640 Coffea canephora HOM05D000379 ORTHO05D000254 9.7e-09 63.2 73 45.2
AUR62003217 Chenopodium quinoa HOM05D000379 ORTHO05D000254 1.3e-08 62.8 51 54.9
Nitab4.5_0005519g0010 Nicotiana tabacum HOM05D000379 ORTHO05D000254 1.3e-08 62.8 42 69.0
BcaC08g44672 Brassica carinata HOM05D000379 ORTHO05D000254 1.7e-08 62.4 52 53.8
C06p21970 Brassica napus HOM05D000379 ORTHO05D000254 1.7e-08 62.4 52 53.8
BolC6t37381H Brassica oleracea HOM05D000379 ORTHO05D000254 1.7e-08 62.4 52 53.8
A03p28970 Brassica napus HOM05D000379 ORTHO05D000254 2.8e-08 61.6 52 51.9
BraA03t12095Z Brassica rapa HOM05D000379 ORTHO05D000254 2.8e-08 61.6 52 51.9
Nn7g37195 Nelumbo nucifera HOM05D000379 ORTHO05D000254 2.8e-08 61.6 54 53.7
PSO423G0065 Papaver somniferum HOM05D000379 ORTHO05D000254 2.8e-08 61.6 54 57.4
Aqoxy3G03992 Aquilegia oxysepala HOM05D000379 ORTHO05D000254 3.7e-08 61.2 77 51.9
A07p22010 Brassica napus HOM05D000379 ORTHO05D000254 3.7e-08 61.2 52 51.9
Zm00001eb043650 Zea mays HOM05D000379 ORTHO05D000254 3.7e-08 61.2 55 61.8
PSO040G0004 Papaver somniferum HOM05D000379 ORTHO05D000254 8.2e-08 60.1 54 57.4
Ah.03g142220 Amaranthus hybridus HOM05D000379 ORTHO05D000254 1.1e-07 59.7 54 57.4
Os10g0513200 Oryza sativa ssp. japonica HOM05D000379 ORTHO05D000254 1.1e-07 59.7 53 56.6
Sp6g07050 Schrenkiella parvula HOM05D000379 ORTHO05D000254 1.1e-07 59.7 52 55.8
CiPaw.11G105200 Carya illinoinensis HOM05D000379 ORTHO05D000254 1.4e-07 59.3 34 70.6
HanXRQChr01g0016031 Helianthus annuus HOM05D000379 ORTHO05D000254 1.4e-07 59.3 51 56.9
CDE04G0436 Ceratophyllum demersum HOM05D000379 ORTHO05D000254 3.1e-07 58.2 52 57.7
Sed0014047 Sechium edule HOM05D000379 ORTHO05D000254 3.1e-07 58.2 54 55.6
Sed0022438 Sechium edule HOM05D000379 ORTHO05D000254 4.5e-06 54.3 48 52.1
Hund14124 Selenicereus undatus HOM05D000379 ORTHO05D000254 5.9e-06 53.9 53 50.9


User provided reference genes

Program Settings