Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu017623.1 Olea europaea HOM05D003947 ORTHO05D004614 7.7e-109 397.1 196 100.0
Oeu022056.3 Olea europaea HOM05D003947 ORTHO05D004614 9.2e-78 293.9 196 79.6
Dinv41043 Davidia involucrata HOM05D003947 ORTHO05D004614 7.3e-59 231.1 189 64.6
Nitab4.5_0002812g0010 Nicotiana tabacum HOM05D003947 ORTHO05D004614 1.2e-58 230.3 189 63.0
SalBow6G2315 Salvia bowleyana HOM05D003947 ORTHO05D004614 1.2e-58 230.3 198 62.6
Actinidia29546 Actinidia chinensis HOM05D003947 ORTHO05D004614 8.1e-58 227.6 189 61.4
CSS0022992 Camellia sinensis var. sinensis HOM05D003947 ORTHO05D004614 8.1e-58 227.6 190 62.6
Nitab4.5_0000099g0180 Nicotiana tabacum HOM05D003947 ORTHO05D004614 8.1e-58 227.6 189 62.4
Oeu051281.1 Olea europaea HOM05D003947 ORTHO05D004614 1.2e-56 223.8 191 62.8
Solyc04g071970.4 Solanum lycopersicum HOM05D003947 ORTHO05D004614 1.2e-56 223.8 189 61.9
Hma1.2p1_0358F.1_g134715 Hydrangea macrophylla HOM05D003947 ORTHO05D004614 1.5e-56 223.4 189 60.8
PGSC0003DMG401025066 Solanum tuberosum HOM05D003947 ORTHO05D004614 5.8e-56 221.5 189 61.4
Actinidia17770 Actinidia chinensis HOM05D003947 ORTHO05D004614 7.6e-56 221.1 189 61.4
Sopen04g027950 Solanum pennellii HOM05D003947 ORTHO05D004614 7.6e-56 221.1 189 61.4
Peaxi162Scf00360g00029 Petunia axillaris HOM05D003947 ORTHO05D004614 1.3e-55 220.3 189 60.8
Haze_17801 Corylus avellana HOM05D003947 ORTHO05D004614 3.2e-54 215.7 190 60.5
Oeu002064.1 Olea europaea HOM05D003947 ORTHO05D004614 4.2e-54 215.3 193 62.7
Cfa018286 Carpinus fangiana HOM05D003947 ORTHO05D004614 7.1e-54 214.5 188 60.1
GSVIVG01034579001 Vitis vinifera HOM05D003947 ORTHO05D004614 7.1e-54 214.5 188 61.2
Hma1.2p1_0678F.1_g202000 Hydrangea macrophylla HOM05D003947 ORTHO05D004614 9.2e-54 214.2 189 61.4
TAR625G1169 Trochodendron aralioides HOM05D003947 ORTHO05D004614 1.6e-53 213.4 192 59.4
QL02p038162 Quercus lobata HOM05D003947 ORTHO05D004614 2.7e-53 212.6 194 57.2
Cc10_g15190 Coffea canephora HOM05D003947 ORTHO05D004614 3.5e-53 212.2 189 61.9
SalBow7G0665 Salvia bowleyana HOM05D003947 ORTHO05D004614 6.0e-53 211.5 198 62.1
TWI60G0849 Tripterygium wilfordii HOM05D003947 ORTHO05D004614 6.0e-53 211.5 188 59.0
MSTRG.24219 Avicennia marina HOM05D003947 ORTHO05D004614 3.0e-52 209.1 192 59.9
MSTRG.25300 Avicennia marina HOM05D003947 ORTHO05D004614 1.1e-51 207.2 202 58.9
Lj7P382T65 Lonicera japonica HOM05D003947 ORTHO05D004614 1.9e-51 206.5 193 61.1
Prupe.8G040000 Prunus persica HOM05D003947 ORTHO05D004614 2.5e-51 206.1 188 60.1
CiPaw.15G012800 Carya illinoinensis HOM05D003947 ORTHO05D004614 2.1e-50 203.0 188 57.4
TWI32G0514 Tripterygium wilfordii HOM05D003947 ORTHO05D004614 2.8e-50 202.6 188 58.0
vmacro21121 Vaccinium macrocarpon HOM05D003947 ORTHO05D004614 3.6e-50 202.2 195 55.4
TAR381G1088 Trochodendron aralioides HOM05D003947 ORTHO05D004614 4.7e-50 201.8 188 58.5
Manes.02G182900 Manihot esculenta HOM05D003947 ORTHO05D004614 6.2e-50 201.4 188 57.4
Sabra05G0149600 Salix brachista HOM05D003947 ORTHO05D004614 6.2e-50 201.4 189 58.7
MD10G1033900 Malus domestica HOM05D003947 ORTHO05D004614 1.1e-49 200.7 188 56.9
Migut.C00963 Erythranthe guttata HOM05D003947 ORTHO05D004614 1.8e-49 199.9 205 56.6
Potri.005G196300 Populus trichocarpa HOM05D003947 ORTHO05D004614 2.4e-49 199.5 189 59.3
Thecc.08G158700 Theobroma cacao HOM05D003947 ORTHO05D004614 5.3e-49 198.4 189 57.7
Atru.chr13.2012 Acer truncatum HOM05D003947 ORTHO05D004614 9.0e-49 197.6 192 58.3
COL.COLO4_03360 Corchorus olitorius HOM05D003947 ORTHO05D004614 1.2e-48 197.2 192 56.8
Manes.18G094500 Manihot esculenta HOM05D003947 ORTHO05D004614 1.2e-48 197.2 188 57.4
MD05G1032900 Malus domestica HOM05D003947 ORTHO05D004614 3.4e-48 195.7 188 55.3
MSTRG.1106 Avicennia marina HOM05D003947 ORTHO05D004614 4.4e-48 195.3 195 58.5
Sabra02G0051800 Salix brachista HOM05D003947 ORTHO05D004614 5.8e-48 194.9 189 59.3
Glyma.20G169600 Glycine max HOM05D003947 ORTHO05D004614 7.6e-48 194.5 190 57.4
CANSAT25G3237 Cannabis sativa HOM05D003947 ORTHO05D004614 9.9e-48 194.1 188 54.8
Duzib093G0177 Durio zibethinus HOM05D003947 ORTHO05D004614 1.3e-47 193.7 188 56.9
Lj5g0019118 Lotus japonicus HOM05D003947 ORTHO05D004614 1.7e-47 193.4 192 56.8
CiPaw.16G008700 Carya illinoinensis HOM05D003947 ORTHO05D004614 2.2e-47 193.0 188 54.8
Psat6g190840 Pisum sativum HOM05D003947 ORTHO05D004614 2.2e-47 193.0 192 56.2
Glyma.10G221900 Glycine max HOM05D003947 ORTHO05D004614 4.9e-47 191.8 190 56.8
TAR628G1588 Trochodendron aralioides HOM05D003947 ORTHO05D004614 4.9e-47 191.8 194 55.2
Duzib116G0212 Durio zibethinus HOM05D003947 ORTHO05D004614 6.4e-47 191.4 188 56.9
Medtr1g098260 Medicago truncatula HOM05D003947 ORTHO05D004614 6.4e-47 191.4 189 55.6
TAR376G1220 Trochodendron aralioides HOM05D003947 ORTHO05D004614 6.4e-47 191.4 189 56.6
Aqoxy6G00408 Aquilegia oxysepala HOM05D003947 ORTHO05D004614 1.1e-46 190.7 194 52.6
Cpa.g.sc26.88 Carica papaya HOM05D003947 ORTHO05D004614 1.1e-46 190.7 193 54.9
DCAR_001161 Daucus carota HOM05D003947 ORTHO05D004614 1.1e-46 190.7 194 56.2
Ca_10666_v3 Cicer arietinum L. HOM05D003947 ORTHO05D004614 4.2e-46 188.7 190 54.2
arahy.Tifrunner.gnm1.ann1.8MR9WY Arachis hypogaea HOM05D003947 ORTHO05D004614 5.4e-46 188.3 188 56.4
arahy.Tifrunner.gnm1.ann1.H1TMWI Arachis hypogaea HOM05D003947 ORTHO05D004614 5.4e-46 188.3 188 55.3
arahy.Tifrunner.gnm1.ann1.P1AQDG Arachis hypogaea HOM05D003947 ORTHO05D004614 7.1e-46 188.0 189 55.6
RcHm_v2.0_Chr6g0274321 Rosa chinensis HOM05D003947 ORTHO05D004614 7.1e-46 188.0 189 53.4
Hund17479 Selenicereus undatus HOM05D003947 ORTHO05D004614 9.3e-46 187.6 189 53.4
Ciclev10002453m.g Citrus clementina HOM05D003947 ORTHO05D004614 2.1e-45 186.4 192 57.3
Phvul.007G083100 Phaseolus vulgaris HOM05D003947 ORTHO05D004614 2.1e-45 186.4 190 57.4
Ah.05g168170 Amaranthus hybridus HOM05D003947 ORTHO05D004614 2.7e-45 186.0 189 54.0
Lj4P703T37 Lonicera japonica HOM05D003947 ORTHO05D004614 3.5e-45 185.7 199 56.3
Gorai.005G077400 Gossypium raimondii HOM05D003947 ORTHO05D004614 4.6e-45 185.3 190 55.3
Gohir.A02G062801 Gossypium hirsutum HOM05D003947 ORTHO05D004614 6.0e-45 184.9 190 55.3
Potri.002G064900 Populus trichocarpa HOM05D003947 ORTHO05D004614 6.0e-45 184.9 189 57.1
VMungo0720G0983 Vigna mungo HOM05D003947 ORTHO05D004614 6.0e-45 184.9 190 55.8
arahy.Tifrunner.gnm1.ann1.2W58SS Arachis hypogaea HOM05D003947 ORTHO05D004614 1.0e-44 184.1 188 54.8
FvH4_2g13060 Fragaria vesca HOM05D003947 ORTHO05D004614 1.0e-44 184.1 189 52.9
FAN24G1125 Fragaria x ananassa HOM05D003947 ORTHO05D004614 1.0e-44 184.1 189 52.9
Gohir.D02G068500 Gossypium hirsutum HOM05D003947 ORTHO05D004614 1.3e-44 183.7 190 54.7
vmacro01489 Vaccinium macrocarpon HOM05D003947 ORTHO05D004614 1.3e-44 183.7 189 56.1
AUR62034897 Chenopodium quinoa HOM05D003947 ORTHO05D004614 1.7e-44 183.3 193 50.8
Sed0016828 Sechium edule HOM05D003947 ORTHO05D004614 3.0e-44 182.6 192 52.6
FAN27G1126 Fragaria x ananassa HOM05D003947 ORTHO05D004614 3.9e-44 182.2 188 52.7
Rhsim11G0087300 Rhododendron simsii HOM05D003947 ORTHO05D004614 5.1e-44 181.8 189 55.6
MBI04_g08942_MAGBIO Magnolia biondii HOM05D003947 ORTHO05D004614 1.1e-43 180.6 196 53.6
Sed0008617 Sechium edule HOM05D003947 ORTHO05D004614 1.1e-43 180.6 190 53.7
ClCG08G003050 Citrullus lanatus HOM05D003947 ORTHO05D004614 1.5e-43 180.3 186 54.3
Eucgr.F04191 Eucalyptus grandis HOM05D003947 ORTHO05D004614 1.5e-43 180.3 188 52.7
FAN15G1092 Fragaria x ananassa HOM05D003947 ORTHO05D004614 1.5e-43 180.3 187 51.9
Migut.N03200 Erythranthe guttata HOM05D003947 ORTHO05D004614 2.5e-43 179.5 200 52.0
AUR62026639 Chenopodium quinoa HOM05D003947 ORTHO05D004614 3.3e-43 179.1 190 50.5
Duzib041G0104 Durio zibethinus HOM05D003947 ORTHO05D004614 3.3e-43 179.1 191 55.0
PGR044G0664 Punica granatum HOM05D003947 ORTHO05D004614 5.6e-43 178.3 189 53.4
Glyma.16G163700 Glycine max HOM05D003947 ORTHO05D004614 1.3e-42 177.2 188 52.7
Lalb_Chr21g0305571 Lupinus albus HOM05D003947 ORTHO05D004614 1.3e-42 177.2 189 55.6
Hund26679 Selenicereus undatus HOM05D003947 ORTHO05D004614 1.3e-42 177.2 194 52.1
Gohir.A05G246100 Gossypium hirsutum HOM05D003947 ORTHO05D004614 1.6e-42 176.8 189 54.5
Gohir.D05G247600 Gossypium hirsutum HOM05D003947 ORTHO05D004614 1.6e-42 176.8 189 54.5
Gorai.009G258400 Gossypium raimondii HOM05D003947 ORTHO05D004614 3.6e-42 175.6 189 54.0
Lalb_Chr02g0141531 Lupinus albus HOM05D003947 ORTHO05D004614 8.1e-42 174.5 191 55.5
Sc02g0003850 Simmondsia chinensis HOM05D003947 ORTHO05D004614 8.1e-42 174.5 190 53.7
SGA_v2.0_scaffold108G30867 Striga asiatica HOM05D003947 ORTHO05D004614 1.4e-41 173.7 190 55.8
Actinidia04751 Actinidia chinensis HOM05D003947 ORTHO05D004614 2.4e-41 172.9 188 52.7
CSS0014660 Camellia sinensis var. sinensis HOM05D003947 ORTHO05D004614 7.6e-40 167.9 188 51.6
PSO541G4258 Papaver somniferum HOM05D003947 ORTHO05D004614 1.3e-39 167.2 191 51.3
HanXRQChr10g0278611 Helianthus annuus HOM05D003947 ORTHO05D004614 2.2e-39 166.4 194 53.6
PSO675G7401 Papaver somniferum HOM05D003947 ORTHO05D004614 6.4e-39 164.9 190 51.6
AL1G36340 Arabidopsis lyrata HOM05D003947 ORTHO05D004614 9.3e-38 161.0 194 49.5
AT1G22790 Arabidopsis thaliana HOM05D003947 ORTHO05D004614 1.2e-37 160.6 196 50.0
THA.LOC104806764 Tarenaya hassleriana HOM05D003947 ORTHO05D004614 1.2e-37 160.6 189 49.7
Glyma.02G079300 Glycine max HOM05D003947 ORTHO05D004614 2.1e-37 159.8 190 50.5
Rhsim06G0091600 Rhododendron simsii HOM05D003947 ORTHO05D004614 6.0e-37 158.3 209 52.6
Carub.0001s2230 Capsella rubella HOM05D003947 ORTHO05D004614 1.3e-36 157.1 197 49.2
ECA246G0665 Erigeron canadensis HOM05D003947 ORTHO05D006423 1.3e-36 157.1 192 49.5
VMungo0464G0903 Vigna mungo HOM05D003947 ORTHO05D004614 1.3e-36 157.1 192 50.5
Dinv25896 Davidia involucrata HOM05D003947 ORTHO05D004614 5.1e-36 155.2 191 48.7
THA.LOC104813088 Tarenaya hassleriana HOM05D003947 ORTHO05D004614 6.7e-36 154.8 190 47.9
SGA_v2.0_scaffold195G40776 Striga asiatica HOM05D003947 ORTHO05D004614 3.3e-35 152.5 174 52.9
THA.LOC104810422 Tarenaya hassleriana HOM05D003947 ORTHO05D004614 9.6e-35 151.0 191 48.2
HanXRQChr05g0162361 Helianthus annuus HOM05D003947 ORTHO05D004614 2.1e-34 149.8 196 48.5
HPP92_002802 Vanilla planifolia HOM05D003947 ORTHO05D004614 3.7e-34 149.1 188 46.8
Aa31LG6G8230 Aethionema arabicum HOM05D003947 ORTHO05D004614 6.2e-34 148.3 189 47.6
Lsat_1_v5_gn_1_5261 Lactuca sativa HOM05D003947 ORTHO05D004614 8.1e-34 147.9 218 42.7
Aa31LG7G6750 Aethionema arabicum HOM05D003947 ORTHO05D004614 1.1e-33 147.5 192 47.9
unitig_32.g11256 Utricularia gibba HOM05D003947 ORTHO05D004614 2.4e-33 146.4 204 44.1
Manes.16G051400 Manihot esculenta HOM05D003947 ORTHO05D004614 2.0e-32 143.3 153 51.0
Nn1g06005 Nelumbo nucifera HOM05D003947 ORTHO05D004614 2.0e-32 143.3 190 47.9
Os01g0589700 Oryza sativa ssp. japonica HOM05D003947 ORTHO05D004614 2.0e-32 143.3 199 46.7
Aa31LG4G8980 Aethionema arabicum HOM05D003947 ORTHO05D004614 9.9e-32 141.0 188 44.1
Lalb_Chr19g0130101 Lupinus albus HOM05D003947 ORTHO05D004614 2.2e-31 139.8 190 47.4
Carub.0001s3209 Capsella rubella HOM05D003947 ORTHO05D004614 2.5e-30 136.3 190 43.2
CARHR023150 Cardamine hirsuta HOM05D003947 ORTHO05D004614 2.5e-30 136.3 206 46.1
Phvul.004G091200 Phaseolus vulgaris HOM05D003947 ORTHO05D004614 2.5e-30 136.3 190 43.7
Zm00001eb357510 Zea mays HOM05D003947 ORTHO05D004614 3.2e-30 136.0 197 43.7
Thhalv10008850m.g Eutrema salsugineum HOM05D003947 ORTHO05D004614 4.2e-30 135.6 189 47.1
Zm00001eb160770 Zea mays HOM05D003947 ORTHO05D004614 4.2e-30 135.6 201 42.3
PGR042G2534 Punica granatum HOM05D003947 ORTHO05D004614 5.5e-30 135.2 189 45.0
Lj2g0016258 Lotus japonicus HOM05D003947 ORTHO05D004614 1.2e-29 134.0 190 47.9
CARHR033390 Cardamine hirsuta HOM05D003947 ORTHO05D004614 2.7e-29 132.9 192 44.3
Sp1g29270 Schrenkiella parvula HOM05D003947 ORTHO05D004614 2.7e-29 132.9 189 43.9
AL1G48450 Arabidopsis lyrata HOM05D003947 ORTHO05D004614 3.5e-29 132.5 193 43.5
BcaB07g33023 Brassica carinata HOM05D030501 ORTHO05D004614 7.9e-29 131.3 192 44.3
BolC5t32518H Brassica oleracea HOM05D003947 ORTHO05D004614 1.0e-28 131.0 188 43.1
C05p37750 Brassica napus HOM05D003947 ORTHO05D004614 3.0e-28 129.4 191 42.4
BcaC05g27781 Brassica carinata HOM05D003947 ORTHO05D004614 5.6e-27 125.2 188 42.0
BcaC08g43824 Brassica carinata HOM05D003947 ORTHO05D004614 7.4e-27 124.8 191 42.4
BolC6t36345H Brassica oleracea HOM05D003947 ORTHO05D004614 7.4e-27 124.8 191 42.4
C06p12080 Brassica napus HOM05D003947 ORTHO05D004614 9.6e-27 124.4 191 42.4
BraA05t21288Z Brassica rapa HOM05D003947 ORTHO05D006423 9.6e-27 124.4 191 42.4
A09p32460 Brassica napus HOM05D003947 ORTHO05D004614 1.6e-26 123.6 190 42.1
BraA09t38788Z Brassica rapa HOM05D003947 ORTHO05D004614 1.6e-26 123.6 192 42.2
CsaV3_6G005040 Cucumis sativus L. HOM05D003947 ORTHO05D004614 2.8e-26 122.9 192 43.8
A05p24080 Brassica napus HOM05D003947 ORTHO05D004614 4.8e-26 122.1 188 42.6
MELO3C008326.2 Cucumis melo HOM05D003947 ORTHO05D004614 4.8e-26 122.1 192 44.3
TPR.G17018 Trifolium pratense HOM05D003947 ORTHO05D004614 1.1e-25 120.9 151 46.4
ClCG08G007400 Citrullus lanatus HOM05D003947 ORTHO05D004614 3.1e-25 119.4 192 42.7
AT1G34010 Arabidopsis thaliana HOM05D003947 ORTHO05D004614 5.3e-25 118.6 189 41.3
SHI09085 Sapria himalayana HOM05D003947 ORTHO05D004614 2.6e-24 116.3 190 43.7
SalBow7G0026 Salvia bowleyana HOM05D003947 ORTHO05D004614 1.3e-23 114.0 107 62.6
Actinidia26828 Actinidia chinensis HOM05D003947 ORTHO05D004614 4.9e-23 112.1 153 43.8
BcaNung06442 Brassica carinata HOM05D003947 ORTHO05D004614 8.7e-20 101.3 212 39.6
ATR1120G111 Amborella trichopoda HOM05D003947 ORTHO05D004614 2.5e-19 99.8 199 38.2
PSO170G0396 Papaver somniferum HOM05D003947 ORTHO05D004614 5.7e-19 98.6 201 38.3
PSO700G0284 Papaver somniferum HOM05D003947 ORTHO05D004614 2.8e-18 96.3 200 38.5
Lsat_1_v5_gn_6_101640 Lactuca sativa HOM05D003947 ORTHO05D004614 3.7e-18 95.9 198 37.4
Lsat_1_v5_gn_9_42121 Lactuca sativa HOM05D003947 ORTHO05D004614 3.7e-18 95.9 190 38.9
BraA09t39684Z Brassica rapa HOM05D003947 ORTHO05D004614 4.8e-18 95.5 204 40.7
Os05g0591450 Oryza sativa ssp. japonica HOM05D003947 ORTHO05D004614 5.9e-16 88.6 76 61.8
Sed0006124 Sechium edule HOM05D003947 ORTHO05D004614 5.5e-14 82.0 145 40.0
Sed0022469 Sechium edule HOM05D003947 ORTHO05D004614 2.8e-10 69.7 155 36.8
BolC5t30884H Brassica oleracea HOM05D003947 ORTHO05D004614 3.1e-09 66.2 220 33.2
A09p41960 Brassica napus HOM05D003947 ORTHO05D004614 9.1e-09 64.7 202 33.7
BcaNung06106 Brassica carinata HOM05D003947 ORTHO05D004614 1.5e-08 63.9 152 38.2


User provided reference genes

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