Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu017620.1 Olea europaea HOM05D006901 ORTHO05D008582 2.9e-79 298.5 151 100.0
MSTRG.22112 Avicennia marina HOM05D006901 ORTHO05D008582 1.1e-43 180.3 149 63.1
Dinv02470 Davidia involucrata HOM05D006901 ORTHO05D008582 2.2e-39 166.0 157 58.0
Actinidia17766 Actinidia chinensis HOM05D006901 ORTHO05D008582 2.1e-37 159.5 154 59.1
Hma1.2p1_0678F.1_g202120 Hydrangea macrophylla HOM05D006901 ORTHO05D008582 2.1e-37 159.5 153 58.2
SalBow7G3034 Salvia bowleyana HOM05D006901 ORTHO05D008582 1.3e-36 156.8 149 57.7
SGA_v2.0_scaffold82G26198 Striga asiatica HOM05D006901 ORTHO05D008582 3.0e-36 155.6 149 59.7
Sopen04g028100 Solanum pennellii HOM05D006901 ORTHO05D008582 5.1e-36 154.8 148 56.1
CSS0011226 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 6.7e-36 154.5 154 57.8
CSS0025966 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 6.7e-36 154.5 154 57.8
Actinidia15615 Actinidia chinensis HOM05D006901 ORTHO05D008582 8.7e-36 154.1 145 57.9
PGSC0003DMG400025056 Solanum tuberosum HOM05D006901 ORTHO05D008582 1.1e-35 153.7 148 55.4
Nitab4.5_0003178g0070 Nicotiana tabacum HOM05D006901 ORTHO05D008582 1.5e-35 153.3 148 58.1
Solyc04g072038.1 Solanum lycopersicum HOM05D006901 ORTHO05D008582 2.5e-35 152.5 148 55.4
Cc10_g06470 Coffea canephora HOM05D006901 ORTHO05D008582 9.7e-35 150.6 153 55.6
Nitab4.5_0003443g0040 Nicotiana tabacum HOM05D006901 ORTHO05D008582 2.8e-34 149.1 148 57.4
MD10G1037700 Malus domestica HOM05D006901 ORTHO05D008582 3.7e-34 148.7 156 57.1
SalBow8G2041 Salvia bowleyana HOM05D006901 ORTHO05D008582 2.4e-33 146.0 136 59.6
Duzib041G0277 Durio zibethinus HOM05D006901 ORTHO05D008582 1.2e-32 143.7 162 52.5
HanXRQChr02g0041271 Helianthus annuus HOM05D006901 ORTHO05D008582 4.5e-32 141.7 153 55.6
Duzib116G0108 Durio zibethinus HOM05D006901 ORTHO05D008582 1.0e-31 140.6 159 51.6
unitig_32.g11111 Utricularia gibba HOM05D006901 ORTHO05D008582 1.3e-31 140.2 119 63.0
Peaxi162Scf00360g00917 Petunia axillaris HOM05D006901 ORTHO05D008582 1.1e-30 137.1 143 54.5
QL02p036605 Quercus lobata HOM05D006901 ORTHO05D008582 1.4e-30 136.7 153 52.9
CiPaw.16G007900 Carya illinoinensis HOM05D006901 ORTHO05D008582 2.5e-30 136.0 165 52.7
Gohir.D06G116100 Gossypium hirsutum HOM05D006901 ORTHO05D008582 2.5e-30 136.0 158 52.5
Gorai.010G133900 Gossypium raimondii HOM05D006901 ORTHO05D008582 2.5e-30 136.0 158 52.5
Haze_17820 Corylus avellana HOM05D006901 ORTHO05D008582 4.2e-30 135.2 114 64.0
QL02p037117 Quercus lobata HOM05D006901 ORTHO05D008582 4.2e-30 135.2 116 62.9
TAR376G0851 Trochodendron aralioides HOM05D006901 ORTHO05D008582 9.4e-30 134.0 121 58.7
Lsat_1_v5_gn_1_5120 Lactuca sativa HOM05D006901 ORTHO05D008582 1.2e-29 133.7 150 55.3
Potri.002G063100 Populus trichocarpa HOM05D006901 ORTHO05D008582 1.6e-29 133.3 171 47.4
Rhsim06G0092600 Rhododendron simsii HOM05D006901 ORTHO05D008582 1.6e-29 133.3 155 53.5
Duzib093G0981 Durio zibethinus HOM05D006901 ORTHO05D008582 2.1e-29 132.9 162 50.6
Gohir.A06G111900 Gossypium hirsutum HOM05D006901 ORTHO05D008582 2.1e-29 132.9 154 52.6
RcHm_v2.0_Chr6g0273991 Rosa chinensis HOM05D006901 ORTHO05D008582 2.1e-29 132.9 142 57.0
MD05G1035400 Malus domestica HOM05D006901 ORTHO05D008582 2.7e-29 132.5 154 53.2
CAN.G1183.19 Capsicum annuum HOM05D006901 ORTHO05D008582 4.6e-29 131.7 114 63.2
Prupe.8G043100 Prunus persica HOM05D006901 ORTHO05D008582 7.9e-29 131.0 115 61.7
Thecc.08G162300 Theobroma cacao HOM05D006901 ORTHO05D008582 7.9e-29 131.0 119 60.5
MELO3C019969.2 Cucumis melo HOM05D006901 ORTHO05D008582 1.0e-28 130.6 119 63.0
FvH4_2g12890 Fragaria vesca HOM05D006901 ORTHO05D008582 1.0e-28 130.6 113 63.7
FAN24G1802 Fragaria x ananassa HOM05D006901 ORTHO05D008582 1.0e-28 130.6 113 63.7
CsaV3_6G004930 Cucumis sativus L. HOM05D006901 ORTHO05D008582 1.4e-28 130.2 119 63.9
Medtr1g097570 Medicago truncatula HOM05D006901 ORTHO05D008582 1.4e-28 130.2 123 57.7
Glyma.10G220600 Glycine max HOM05D006901 ORTHO05D008582 3.9e-28 128.6 87 74.7
Glyma.20G171000 Glycine max HOM05D006901 ORTHO05D008582 3.9e-28 128.6 113 61.1
Lalb_Chr21g0305611 Lupinus albus HOM05D006901 ORTHO05D008582 3.9e-28 128.6 112 61.6
TWI60G0595 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 5.1e-28 128.3 117 58.1
Aa31LG4G8920 Aethionema arabicum HOM05D006901 ORTHO05D008582 6.7e-28 127.9 87 77.0
FAN15G3138 Fragaria x ananassa HOM05D006901 ORTHO05D008582 6.7e-28 127.9 113 62.8
FAN20G0005 Fragaria x ananassa HOM05D006901 ORTHO05D008582 6.7e-28 127.9 113 62.8
THA.LOC104810483 Tarenaya hassleriana HOM05D006901 ORTHO05D008582 6.7e-28 127.9 157 51.0
ClCG08G007260 Citrullus lanatus HOM05D006901 ORTHO05D008582 8.8e-28 127.5 85 76.5
TPR.G792 Trifolium pratense HOM05D006901 ORTHO05D008582 1.1e-27 127.1 124 56.5
TWI34G1320 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 1.1e-27 127.1 111 60.4
FAN27G3188 Fragaria x ananassa HOM05D006901 ORTHO05D008582 1.5e-27 126.7 113 61.9
CANSAT25G0969 Cannabis sativa HOM05D006901 ORTHO05D008582 2.0e-27 126.3 118 57.6
ECA247G1717 Erigeron canadensis HOM05D006901 ORTHO05D008582 2.0e-27 126.3 90 70.0
Cpa.g.sc26.114 Carica papaya HOM05D006901 ORTHO05D008582 2.6e-27 125.9 86 73.3
Psat6g189960 Pisum sativum HOM05D006901 ORTHO05D008582 2.6e-27 125.9 114 59.6
Lj5g0019877 Lotus japonicus HOM05D006901 ORTHO05D008582 7.4e-27 124.4 115 58.3
Ah.16g108540 Amaranthus hybridus HOM05D006901 ORTHO05D008582 9.7e-27 124.0 155 48.4
Lj7E386T0 Lonicera japonica HOM05D006901 ORTHO05D008582 9.7e-27 124.0 90 67.8
Phvul.007G084500 Phaseolus vulgaris HOM05D006901 ORTHO05D008582 1.3e-26 123.6 113 59.3
PGR042G3646 Punica granatum HOM05D006901 ORTHO05D008582 1.3e-26 123.6 86 72.1
Potri.005G198100 Populus trichocarpa HOM05D006901 ORTHO05D008582 1.7e-26 123.2 121 56.2
GSVIVG01013704001 Vitis vinifera HOM05D006901 ORTHO05D008582 2.2e-26 122.9 162 49.4
Manes.18G095700 Manihot esculenta HOM05D006901 ORTHO05D008582 2.8e-26 122.5 87 67.8
PGR102G0180 Punica granatum HOM05D006901 ORTHO05D008582 2.8e-26 122.5 86 70.9
Nn5g28858 Nelumbo nucifera HOM05D006901 ORTHO05D008582 3.7e-26 122.1 172 45.9
Sabra02G0050800 Salix brachista HOM05D006901 ORTHO05D008582 6.3e-26 121.3 171 44.4
arahy.Tifrunner.gnm1.ann1.96Y3Q8 Arachis hypogaea HOM05D006901 ORTHO05D008582 8.2e-26 120.9 101 63.4
arahy.Tifrunner.gnm1.ann1.YZ7MCJ Arachis hypogaea HOM05D006901 ORTHO05D008582 8.2e-26 120.9 101 63.4
CARHR291060 Cardamine hirsuta HOM05D006901 ORTHO05D008582 1.4e-25 120.2 145 48.3
Ca_10653_v3 Cicer arietinum L. HOM05D006901 ORTHO05D008582 1.4e-25 120.2 113 56.6
SEGI_14424 Sequoiadendron giganteum HOM05D006901 ORTHO05D008582 1.4e-25 120.2 87 72.4
ATR1120G022 Amborella trichopoda HOM05D006901 ORTHO05D008582 1.8e-25 119.8 95 65.3
A07p37880 Brassica napus HOM05D006901 ORTHO05D008582 1.8e-25 119.8 113 57.5
BraA07t31353Z Brassica rapa HOM05D006901 ORTHO05D008582 1.8e-25 119.8 113 57.5
VMungo0720G0575 Vigna mungo HOM05D006901 ORTHO05D008582 1.8e-25 119.8 113 58.4
AL2G31300 Arabidopsis lyrata HOM05D006901 ORTHO05D008582 2.4e-25 119.4 86 69.8
BcaC08g46599 Brassica carinata HOM05D006901 ORTHO05D008582 3.1e-25 119.0 129 51.9
C06p45780 Brassica napus HOM05D006901 ORTHO05D008582 3.1e-25 119.0 129 51.9
BolC6t39630H Brassica oleracea HOM05D006901 ORTHO05D008582 3.1e-25 119.0 129 51.9
Eucgr.F02679 Eucalyptus grandis HOM05D006901 ORTHO05D008582 4.1e-25 118.6 83 69.9
HPP92_002808 Vanilla planifolia HOM05D006901 ORTHO05D008582 4.1e-25 118.6 86 68.6
HPP92_002865 Vanilla planifolia HOM05D006901 ORTHO05D008582 4.1e-25 118.6 86 68.6
Carub.0002s1849 Capsella rubella HOM05D006901 ORTHO05D008582 1.2e-24 117.1 85 69.4
Thhalv10019220m.g Eutrema salsugineum HOM05D006901 ORTHO05D008582 1.2e-24 117.1 85 69.4
Sp5g26760 Schrenkiella parvula HOM05D006901 ORTHO05D008582 2.0e-24 116.3 85 68.2
Sc02g0003760 Simmondsia chinensis HOM05D006901 ORTHO05D008582 2.0e-24 116.3 158 48.7
Ciclev10002626m.g Citrus clementina HOM05D006901 ORTHO05D008582 2.6e-24 115.9 125 55.2
Sed0007149 Sechium edule HOM05D006901 ORTHO05D008582 2.6e-24 115.9 85 69.4
Sabra05G0150900 Salix brachista HOM05D006901 ORTHO05D008582 3.4e-24 115.5 84 67.9
Atru.chr13.1989 Acer truncatum HOM05D006901 ORTHO05D008582 4.5e-24 115.2 87 69.0
AT1G71730 Arabidopsis thaliana HOM05D006901 ORTHO05D008582 5.9e-24 114.8 109 57.8
EL10Ac1g01620 Beta vulgaris HOM05D006901 ORTHO05D008582 1.0e-23 114.0 163 47.2
EL10Ac4g07716 Beta vulgaris HOM05D006901 ORTHO05D008582 1.7e-23 113.2 110 58.2
Nn6g32189 Nelumbo nucifera HOM05D006901 ORTHO05D008582 2.9e-23 112.5 87 64.4
EL10Ac1g01617 Beta vulgaris HOM05D006901 ORTHO05D008582 6.5e-23 111.3 116 56.9
PSO541G2877 Papaver somniferum HOM05D006901 ORTHO05D008582 1.4e-22 110.2 152 45.4
PSO675G2506 Papaver somniferum HOM05D006901 ORTHO05D008582 1.9e-22 109.8 152 44.7
AagrBONN_evm.TU.Sc2ySwM_228.5132 Anthoceros agrestis HOM05D006901 ORTHO05D008582 1.2e-21 107.1 97 60.8
CSS0007119 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 1.4e-20 103.6 110 50.0
CSS0012150 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 2.3e-20 102.8 80 63.8
Lj5g0009364 Lotus japonicus HOM05D006901 ORTHO05D008582 2.3e-20 102.8 115 53.0
Pp3c17_20520 Physcomitrium patens HOM05D006901 ORTHO05D008582 3.0e-20 102.4 80 63.8
SMO351G0406 Selaginella moellendorffii HOM05D006901 ORTHO05D008582 3.3e-19 99.0 83 61.4
Os05g0182000 Oryza sativa ssp. japonica HOM05D006901 ORTHO05D008582 4.4e-19 98.6 82 59.8
Zm00001eb346910 Zea mays HOM05D006901 ORTHO05D008582 9.7e-19 97.4 97 52.6
DCAR_001194 Daucus carota HOM05D006901 ORTHO05D008582 1.3e-18 97.1 63 73.0
CBR_g54341 Chara braunii HOM05D006901 ORTHO05D008582 4.5e-16 88.6 103 47.6
CSS0023453 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 9.4e-14 80.9 89 50.6
MCO05G280 Micromonas commoda HOM05D006901 ORTHO05D008582 2.7e-13 79.3 84 50.0
Cre03.g176500 Chlamydomonas reinhardtii HOM05D006901 ORTHO05D008582 3.3e-11 72.4 89 43.8
Ah.08g214420 Amaranthus hybridus HOM05D006901 ORTHO05D008582 5.0e-07 58.5 67 50.7


User provided reference genes

Program Settings