Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu017513.1 Olea europaea HOM05D007058 ORTHO05D009036 1.5e-187 659.4 345 100.0
Cc04_g06820 Coffea canephora HOM05D007058 ORTHO05D009036 1.9e-126 456.4 340 68.8
Migut.I00419 Erythranthe guttata HOM05D007058 ORTHO05D009036 2.7e-125 452.6 338 69.5
Dinv12229 Davidia involucrata HOM05D007058 ORTHO05D009036 3.9e-124 448.7 344 69.5
Hma1.2p1_1614F.1_g293670 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 1.1e-123 447.2 344 68.9
Hma1.2p1_2594F.1_g325085 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 1.1e-123 447.2 344 68.9
Peaxi162Scf00683g00337 Petunia axillaris HOM05D007058 ORTHO05D009036 2.9e-119 432.6 341 65.1
Nitab4.5_0001456g0070 Nicotiana tabacum HOM05D007058 ORTHO05D009036 3.8e-119 432.2 341 65.4
Nitab4.5_0006894g0050 Nicotiana tabacum HOM05D007058 ORTHO05D009036 3.8e-119 432.2 341 65.4
Actinidia02670 Actinidia chinensis HOM05D007058 ORTHO05D009036 2.7e-117 426.0 344 66.3
Solyc03g118860.3 Solanum lycopersicum HOM05D007058 ORTHO05D009036 1.4e-116 423.7 340 64.7
PGSC0003DMG400005667 Solanum tuberosum HOM05D007058 ORTHO05D009036 3.9e-116 422.2 340 65.0
Sopen03g037810 Solanum pennellii HOM05D007058 ORTHO05D009036 5.1e-116 421.8 340 64.7
Gohir.A07G059500 Gossypium hirsutum HOM05D007058 ORTHO05D009036 5.7e-115 418.3 337 65.3
Ciclev10020201m.g Citrus clementina HOM05D007058 ORTHO05D009036 9.7e-115 417.5 339 64.6
GSVIVG01008345001 Vitis vinifera HOM05D007058 ORTHO05D009036 3.7e-114 415.6 345 65.5
Manes.01G015400 Manihot esculenta HOM05D007058 ORTHO05D009036 4.8e-114 415.2 343 63.3
Duzib205G0828 Durio zibethinus HOM05D007058 ORTHO05D009036 6.3e-114 414.8 344 64.0
Thecc.03G043100 Theobroma cacao HOM05D007058 ORTHO05D009036 1.8e-113 413.3 344 64.2
CAN.G1129.46 Capsicum annuum HOM05D007058 ORTHO05D009036 2.4e-113 412.9 340 63.8
FAN18G2897 Fragaria x ananassa HOM05D007058 ORTHO05D009036 3.1e-113 412.5 346 65.9
FAN08G1503 Fragaria x ananassa HOM05D007058 ORTHO05D009036 5.3e-113 411.8 346 65.9
Prupe.5G225300 Prunus persica HOM05D007058 ORTHO05D009036 5.3e-113 411.8 345 65.2
Lj9A424T33 Lonicera japonica HOM05D007058 ORTHO05D009036 9.1e-113 411.0 344 63.1
TWI60G0394 Tripterygium wilfordii HOM05D007058 ORTHO05D009036 9.1e-113 411.0 343 63.6
FAN04G2101 Fragaria x ananassa HOM05D007058 ORTHO05D009036 2.0e-112 409.8 347 66.3
QL10p026796 Quercus lobata HOM05D007058 ORTHO05D009036 2.6e-112 409.5 344 62.5
Sc12g0007400 Simmondsia chinensis HOM05D007058 ORTHO05D009036 2.6e-112 409.5 345 64.1
Eucgr.K02237 Eucalyptus grandis HOM05D007058 ORTHO05D009036 3.4e-112 409.1 340 63.8
RcHm_v2.0_Chr7g0179381 Rosa chinensis HOM05D007058 ORTHO05D009036 7.7e-112 407.9 345 64.1
COL.COLO4_38517 Corchorus olitorius HOM05D007058 ORTHO05D009036 1.0e-111 407.5 353 62.0
FAN13G1457 Fragaria x ananassa HOM05D007058 ORTHO05D009036 1.3e-111 407.1 346 65.6
PGR044G0638 Punica granatum HOM05D007058 ORTHO05D009036 1.3e-111 407.1 340 63.5
MD06G1220900 Malus domestica HOM05D007058 ORTHO05D009036 6.5e-111 404.8 345 63.8
MD14G1230300 Malus domestica HOM05D007058 ORTHO05D009036 6.5e-111 404.8 345 64.6
Atru.chr9.916 Acer truncatum HOM05D007058 ORTHO05D009036 1.1e-110 404.1 346 63.9
Sabra12G0037400 Salix brachista HOM05D007058 ORTHO05D009036 1.1e-110 404.1 345 63.5
Potri.012G053600 Populus trichocarpa HOM05D007058 ORTHO05D009036 2.5e-110 402.9 345 62.3
TAR629G3445 Trochodendron aralioides HOM05D007058 ORTHO05D009036 2.5e-110 402.9 343 62.4
Aqoxy3G04055 Aquilegia oxysepala HOM05D007058 ORTHO05D009036 1.2e-109 400.6 344 63.1
Cpa.g.sc3.458 Carica papaya HOM05D007058 ORTHO05D009036 1.2e-109 400.6 338 63.3
TAR535G0005 Trochodendron aralioides HOM05D007058 ORTHO05D009036 4.7e-109 398.7 343 62.1
EL10Ac5g11484 Beta vulgaris HOM05D007058 ORTHO05D009036 1.4e-108 397.1 341 63.0
CsaV3_1G006960 Cucumis sativus L. HOM05D007058 ORTHO05D009036 1.4e-108 397.1 343 63.6
CANSAT80G0903 Cannabis sativa HOM05D007058 ORTHO05D009036 8.8e-108 394.4 346 61.3
MELO3C002112.2 Cucumis melo HOM05D007058 ORTHO05D009036 3.3e-107 392.5 343 63.3
Nn3g17960 Nelumbo nucifera HOM05D007058 ORTHO05D009036 6.3e-106 388.3 342 60.8
AUR62033787 Chenopodium quinoa HOM05D007058 ORTHO05D009036 8.2e-106 387.9 342 59.9
ClCG04G010870 Citrullus lanatus HOM05D007058 ORTHO05D009036 7.0e-105 384.8 343 62.1
Sed0017039 Sechium edule HOM05D007058 ORTHO05D009036 7.0e-105 384.8 339 63.4
MBI16_g25105_MAGBIO Magnolia biondii HOM05D007058 ORTHO05D009036 9.1e-105 384.4 339 62.5
arahy.Tifrunner.gnm1.ann1.8NC01M Arachis hypogaea HOM05D007058 ORTHO05D009036 2.0e-104 383.3 344 58.4
arahy.Tifrunner.gnm1.ann1.LC4GJT Arachis hypogaea HOM05D007058 ORTHO05D009036 1.0e-103 380.9 344 58.1
TAR371G0970 Trochodendron aralioides HOM05D007058 ORTHO05D009036 5.0e-103 378.6 344 59.3
Hund02350 Selenicereus undatus HOM05D007058 ORTHO05D009036 1.5e-102 377.1 344 59.3
THA.LOC104813907 Tarenaya hassleriana HOM05D007058 ORTHO05D009036 5.5e-102 375.2 339 59.9
PSO063G1254 Papaver somniferum HOM05D007058 ORTHO05D009036 1.6e-101 373.6 341 58.7
PSO782G5502 Papaver somniferum HOM05D007058 ORTHO05D009036 3.6e-101 372.5 341 57.8
Haze_18744 Corylus avellana HOM05D007058 ORTHO05D009036 6.3e-98 361.7 340 59.7
ATR0681G321 Amborella trichopoda HOM05D007058 ORTHO05D009036 4.1e-97 359.0 343 57.4
CARHR066810 Cardamine hirsuta HOM05D007058 ORTHO05D009036 3.8e-95 352.4 341 56.6
A07p39600 Brassica napus HOM05D007058 ORTHO05D009036 5.5e-94 348.6 341 55.7
BraA07t31509Z Brassica rapa HOM05D007058 ORTHO05D009036 7.2e-94 348.2 341 55.4
HPP92_023400 Vanilla planifolia HOM05D007058 ORTHO05D009036 2.1e-93 346.7 339 54.0
Thhalv10018574m.g Eutrema salsugineum HOM05D007058 ORTHO05D009036 3.6e-93 345.9 342 54.1
BcaB03g15080 Brassica carinata HOM05D007058 ORTHO05D009036 1.0e-92 344.4 341 55.1
C06p47890 Brassica napus HOM05D007058 ORTHO05D009036 1.0e-92 344.4 341 54.8
BolC6t39824H Brassica oleracea HOM05D007058 ORTHO05D009036 1.0e-92 344.4 341 54.8
VMungo0251G0619 Vigna mungo HOM05D007058 ORTHO05D009036 1.8e-92 343.6 344 54.9
AL2G33550 Arabidopsis lyrata HOM05D007058 ORTHO05D009036 2.0e-91 340.1 345 53.3
Lj4g0007182 Lotus japonicus HOM05D007058 ORTHO05D009036 2.0e-91 340.1 339 55.8
Sp5g28930 Schrenkiella parvula HOM05D007058 ORTHO05D009036 4.4e-91 339.0 347 53.3
Carub.0002s2049 Capsella rubella HOM05D007058 ORTHO05D009036 2.2e-90 336.7 342 52.9
AT1G73740 Arabidopsis thaliana HOM05D007058 ORTHO05D009036 9.1e-89 331.3 341 52.8
Aa31LG4G4070 Aethionema arabicum HOM05D007058 ORTHO05D009036 2.5e-86 323.2 345 53.6
Gorai.001G067900 Gossypium raimondii HOM05D007058 ORTHO05D009036 4.7e-85 318.9 260 63.5
Phvul.002G325300 Phaseolus vulgaris HOM05D007058 ORTHO05D009036 3.3e-78 296.2 304 53.0
HPP92_027335 Vanilla planifolia HOM05D007058 ORTHO05D009036 7.3e-78 295.0 343 49.0
HPP92_017197 Vanilla planifolia HOM05D007058 ORTHO05D009036 6.1e-77 292.0 343 48.7
AUR62029919 Chenopodium quinoa HOM05D007058 ORTHO05D009036 1.1e-73 281.2 279 56.3
Mapoly0014s0012 Marchantia polymorpha HOM05D007058 ORTHO05D009036 3.0e-71 273.1 343 44.3
Rhsim08G0129700 Rhododendron simsii HOM05D007058 ORTHO05D009036 1.1e-65 254.6 224 61.2
SMO271G0182 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 1.1e-65 254.6 347 43.2
FvH4_5g16720 Fragaria vesca HOM05D007058 ORTHO05D009036 4.1e-65 252.7 229 61.1
Glyma.05G242000 Glycine max HOM05D007058 ORTHO05D009036 2.0e-64 250.4 259 52.1
Mapoly0014s0018 Marchantia polymorpha HOM05D007058 ORTHO05D009036 7.3e-62 241.9 309 43.7
Pp3c1_26880 Physcomitrium patens HOM05D007058 ORTHO05D009036 6.8e-60 235.3 336 38.4
SMO308G0041 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 4.4e-59 232.6 383 39.2
AagrBONN_evm.TU.Sc2ySwM_228.2408 Anthoceros agrestis HOM05D007058 ORTHO05D009036 5.2e-52 209.1 261 46.0
Os01g0516700 Oryza sativa ssp. japonica HOM05D007058 ORTHO05D009036 1.7e-47 194.1 213 50.2
MCO02G081 Micromonas commoda HOM05D007058 ORTHO05D009036 3.9e-47 193.0 352 34.9
Gohir.D07G064300 Gossypium hirsutum HOM05D007058 ORTHO05D009036 6.2e-45 185.7 145 62.8
PRCOL_00000956 Prasinoderma coloniale HOM05D007058 ORTHO05D009036 8.1e-45 185.3 351 36.2
Glyma.08G049450 Glycine max HOM05D007058 ORTHO05D009036 3.1e-36 156.8 116 67.2
CBR_g74658 Chara braunii HOM05D007058 ORTHO05D009036 6.9e-36 155.6 550 25.6
CAN.G1074.8 Capsicum annuum HOM05D007058 ORTHO05D009036 2.9e-34 150.2 151 53.6
Zm00001eb132130 Zea mays HOM05D007058 ORTHO05D009036 7.1e-33 145.6 224 39.3
Glyma.08G049500 Glycine max HOM05D007058 ORTHO05D009036 4.8e-29 132.9 153 47.7
arahy.Tifrunner.gnm1.ann1.4SU3WD Arachis hypogaea HOM05D007058 ORTHO05D009036 1.4e-28 131.3 141 49.6
SalBow5G0499 Salvia bowleyana HOM05D007058 ORTHO05D010040 4.9e-26 122.9 142 51.4
AUR62029918 Chenopodium quinoa HOM05D007058 ORTHO05D009036 2.3e-23 114.0 82 67.1
CAN.G169.6 Capsicum annuum HOM05D007058 ORTHO05D009036 3.0e-23 113.6 125 52.0
Cre12.g527950 Chlamydomonas reinhardtii HOM05D007058 ORTHO05D009036 8.7e-23 112.1 312 29.5
Ah.11g045170 Amaranthus hybridus HOM05D007058 ORTHO05D009036 1.1e-20 105.1 84 65.5
Gorai.001G067800 Gossypium raimondii HOM05D007058 ORTHO05D009036 2.4e-20 104.0 80 70.0
SEGI_28231 Sequoiadendron giganteum HOM05D007058 ORTHO05D009036 4.5e-19 99.8 77 63.6
BcaC08g46795 Brassica carinata HOM05D007058 ORTHO05D009036 1.3e-13 81.6 78 55.1
CAN.G507.4 Capsicum annuum HOM05D006747 ORTHO05D008384 6.3e-13 79.3 87 48.3
Gohir.D07G064250 Gossypium hirsutum HOM05D007058 ORTHO05D009036 8.2e-13 79.0 61 72.1
arahy.Tifrunner.gnm1.ann1.MMR300 Arachis hypogaea HOM05D007058 ORTHO05D009036 2.5e-09 67.4 60 60.0
Rhsim08G0129900 Rhododendron simsii HOM05D007058 ORTHO05D009036 2.1e-08 64.3 54 61.1
Rhsim08G0129800 Rhododendron simsii HOM05D007058 ORTHO05D021411 1.4e-07 61.6 37 83.8
CAN.G46.28 Capsicum annuum HOM05D001997 ORTHO05D004620 9.7e-06 55.5 37 67.6


User provided reference genes

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