Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu017488.1 Olea europaea HOM05D006048 ORTHO05D007642 0.0e+00 1426.0 815 100.0
Migut.B01039 Erythranthe guttata HOM05D006048 ORTHO05D007642 9.2e-164 581.6 632 50.8
SalBow8G1366 Salvia bowleyana HOM05D006048 ORTHO05D007642 1.0e-146 525.0 669 47.1
MSTRG.20430 Avicennia marina HOM05D006048 ORTHO05D007642 9.9e-142 508.4 683 46.9
Nitab4.5_0008677g0020 Nicotiana tabacum HOM05D006048 ORTHO05D007642 4.4e-134 483.0 670 43.0
CAN.G1077.18 Capsicum annuum HOM05D006048 ORTHO05D007642 5.8e-134 482.6 651 46.1
PGSC0003DMG401028588 Solanum tuberosum HOM05D006048 ORTHO05D007642 6.4e-133 479.2 648 45.5
Nitab4.5_0005388g0020 Nicotiana tabacum HOM05D006048 ORTHO05D007642 4.6e-131 473.0 584 45.4
Sopen01g042410 Solanum pennellii HOM05D006048 ORTHO05D007642 7.8e-131 472.2 665 44.1
CSS0040601 Camellia sinensis var. sinensis HOM05D006048 ORTHO05D007642 5.1e-130 469.5 628 47.1
Solyc01g098870.3 Solanum lycopersicum HOM05D006048 ORTHO05D007642 3.3e-129 466.8 648 44.4
Peaxi162Scf00037g00236 Petunia axillaris HOM05D006048 ORTHO05D007642 4.8e-128 463.0 692 43.1
Actinidia05707 Actinidia chinensis HOM05D006048 ORTHO05D007642 3.1e-127 460.3 642 44.9
Actinidia23630 Actinidia chinensis HOM05D006048 ORTHO05D007642 1.2e-123 448.4 636 44.7
Hma1.2p1_0928F.1_g237870 Hydrangea macrophylla HOM05D006048 ORTHO05D007642 5.6e-121 439.5 640 44.8
SGA_v2.0_scaffold172G38965 Striga asiatica HOM05D006048 ORTHO05D007642 1.8e-119 434.5 671 42.8
Cc02_g33600 Coffea canephora HOM05D006048 ORTHO05D007642 1.2e-118 431.8 741 39.8
Dinv23949 Davidia involucrata HOM05D006048 ORTHO05D007642 1.2e-118 431.8 650 43.5
Thecc.05G304700 Theobroma cacao HOM05D006048 ORTHO05D007642 4.9e-117 426.4 640 41.7
GSVIVG01000040001 Vitis vinifera HOM05D006048 ORTHO05D007642 2.1e-115 421.0 539 46.4
Potri.013G023600 Populus trichocarpa HOM05D006048 ORTHO05D007642 1.5e-113 414.8 660 41.2
Ciclev10000202m.g Citrus clementina HOM05D006048 ORTHO05D007642 2.5e-113 414.1 643 40.4
COL.COLO4_13482 Corchorus olitorius HOM05D006048 ORTHO05D007642 7.4e-113 412.5 627 41.8
Sabra13G0025400 Salix brachista HOM05D006048 ORTHO05D007642 1.6e-112 411.4 650 41.8
TAR636G0181 Trochodendron aralioides HOM05D006048 ORTHO05D007642 3.8e-109 400.2 664 40.2
Cfa006579 Carpinus fangiana HOM05D006048 ORTHO05D007642 4.9e-109 399.8 625 40.2
QL03p006882 Quercus lobata HOM05D006048 ORTHO05D007642 8.4e-109 399.1 662 40.8
Haze_04204 Corylus avellana HOM05D006048 ORTHO05D007642 1.4e-108 398.3 642 39.4
Rhsim07G0182400 Rhododendron simsii HOM05D006048 ORTHO05D007642 2.5e-108 397.5 718 40.3
Potri.005G034100 Populus trichocarpa HOM05D006048 ORTHO05D007642 9.3e-108 395.6 656 39.5
TWI12G1173 Tripterygium wilfordii HOM05D006048 ORTHO05D007642 5.1e-106 389.8 634 39.7
Gohir.D11G274400 Gossypium hirsutum HOM05D006048 ORTHO05D007642 6.7e-106 389.4 662 40.2
Duzib128G0698 Durio zibethinus HOM05D006048 ORTHO05D007642 8.7e-106 389.0 656 39.6
Gorai.007G296200 Gossypium raimondii HOM05D006048 ORTHO05D007642 8.7e-106 389.0 660 40.0
Gohir.A11G264200 Gossypium hirsutum HOM05D006048 ORTHO05D007642 4.3e-105 386.7 666 40.4
Manes.09G166100 Manihot esculenta HOM05D006048 ORTHO05D007642 5.7e-105 386.3 670 39.1
MD12G1220300 Malus domestica HOM05D006048 ORTHO05D007642 6.2e-104 382.9 538 42.8
Sabra05G0036000 Salix brachista HOM05D006048 ORTHO05D007642 6.2e-104 382.9 655 38.3
TWI56G0330 Tripterygium wilfordii HOM05D006048 ORTHO05D007642 4.5e-102 376.7 665 39.2
Prupe.6G327100 Prunus persica HOM05D006048 ORTHO05D007642 8.4e-101 372.5 627 40.0
FAN05G1530 Fragaria x ananassa HOM05D006048 ORTHO05D007642 4.3e-97 360.1 640 38.4
RcHm_v2.0_Chr3g0454571 Rosa chinensis HOM05D006048 ORTHO05D007642 1.6e-96 358.2 660 37.6
Sc06g0003370 Simmondsia chinensis HOM05D006048 ORTHO05D007642 2.2e-96 357.8 583 39.1
FAN14G2795 Fragaria x ananassa HOM05D006048 ORTHO05D007642 4.8e-96 356.7 651 37.9
FvH4_6g05680 Fragaria vesca HOM05D006048 ORTHO05D007642 1.1e-95 355.5 647 38.2
MD04G1206500 Malus domestica HOM05D006048 ORTHO05D007642 1.4e-95 355.1 706 36.0
FAN14G2991 Fragaria x ananassa HOM05D006048 ORTHO05D007642 4.1e-95 353.6 651 37.9
ECA238G0871 Erigeron canadensis HOM05D006048 ORTHO05D007642 1.1e-89 335.5 627 37.3
FAN02G2040 Fragaria x ananassa HOM05D006048 ORTHO05D007642 1.5e-89 335.1 649 37.8
FAN09G2502 Fragaria x ananassa HOM05D006048 ORTHO05D007642 1.3e-88 332.0 651 36.4
FAN05G2734 Fragaria x ananassa HOM05D006048 ORTHO05D007642 3.8e-85 320.5 610 37.9
EL10Ac4g09343 Beta vulgaris HOM05D006048 ORTHO05D007642 3.2e-84 317.4 512 38.1
Nn1g02208 Nelumbo nucifera HOM05D006048 ORTHO05D007642 2.1e-83 314.7 760 33.8
Nn4g26237 Nelumbo nucifera HOM05D006048 ORTHO05D007642 3.6e-83 313.9 674 34.7
ClCG02G015880 Citrullus lanatus HOM05D006048 ORTHO05D007642 1.4e-82 312.0 639 35.2
Medtr1g082840 Medicago truncatula HOM05D006048 ORTHO05D007642 2.3e-82 311.2 745 34.1
Lj5g0003009 Lotus japonicus HOM05D006048 ORTHO05D007642 8.8e-82 309.3 542 39.9
THA.LOC104805873 Tarenaya hassleriana HOM05D006048 ORTHO05D007642 1.5e-81 308.5 681 34.8
HanXRQChr15g0463081 Helianthus annuus HOM05D006048 ORTHO05D007642 2.0e-81 308.1 644 35.9
Cpa.g.sc48.39 Carica papaya HOM05D006048 ORTHO05D007642 4.4e-81 307.0 641 35.7
Ca_10107_v3 Cicer arietinum L. HOM05D006048 ORTHO05D007642 4.4e-81 307.0 742 33.2
Lalb_Chr21g0310721 Lupinus albus HOM05D006048 ORTHO05D007642 7.4e-81 306.2 688 34.6
AUR62000837 Chenopodium quinoa HOM05D006048 ORTHO05D007642 1.3e-80 305.4 590 35.1
MELO3C004275.2 Cucumis melo HOM05D006048 ORTHO05D007642 1.7e-80 305.1 648 34.4
PGR031G0290 Punica granatum HOM05D006048 ORTHO05D007642 8.2e-80 302.8 734 32.8
Sed0020620 Sechium edule HOM05D006048 ORTHO05D007642 3.1e-79 300.8 579 34.2
Ah.06g189270 Amaranthus hybridus HOM05D006048 ORTHO05D007642 4.1e-79 300.4 660 36.1
Glyma.10G155100 Glycine max HOM05D006048 ORTHO05D007642 4.1e-79 300.4 736 33.2
Aqoxy2G03311 Aquilegia oxysepala HOM05D006048 ORTHO05D007642 9.1e-79 299.3 667 33.6
AUR62005136 Chenopodium quinoa HOM05D006048 ORTHO05D007642 9.1e-79 299.3 600 34.3
Glyma.20G233200 Glycine max HOM05D006048 ORTHO05D007642 1.2e-78 298.9 735 33.5
CsaV3_2G005180 Cucumis sativus L. HOM05D006048 ORTHO05D007642 7.7e-78 296.2 650 34.6
Eucgr.H04481 Eucalyptus grandis HOM05D006048 ORTHO05D007642 2.2e-77 294.7 695 33.2
Lalb_Chr06g0167761 Lupinus albus HOM05D006048 ORTHO05D007642 8.5e-77 292.7 530 36.8
THA.LOC104820894 Tarenaya hassleriana HOM05D006048 ORTHO05D007642 4.2e-76 290.4 683 32.9
Phvul.007G180600 Phaseolus vulgaris HOM05D006048 ORTHO05D007642 1.6e-75 288.5 517 37.5
Hund07062 Selenicereus undatus HOM05D006048 ORTHO05D007642 3.6e-75 287.3 676 33.4
VMungo0720G0675 Vigna mungo HOM05D006048 ORTHO05D007642 4.7e-75 287.0 658 34.3
TPR.G6104 Trifolium pratense HOM05D006048 ORTHO05D007642 8.0e-75 286.2 721 33.8
vmacro05021 Vaccinium macrocarpon HOM05D006048 ORTHO05D007642 1.5e-73 282.0 611 34.4
Lsat_1_v5_gn_2_64861 Lactuca sativa HOM05D006048 ORTHO05D007642 5.7e-73 280.0 694 33.1
Psat6g149640 Pisum sativum HOM05D006048 ORTHO05D007642 6.5e-69 266.5 484 37.6
Carub.0002s0845 Capsella rubella HOM05D006048 ORTHO05D007642 1.2e-67 262.3 723 30.7
MBI19_g16658_MAGBIO Magnolia biondii HOM05D006048 ORTHO05D007642 2.1e-67 261.5 502 35.1
PSO170G0056 Papaver somniferum HOM05D006048 ORTHO05D007642 8.0e-67 259.6 367 40.1
PSO302G0271 Papaver somniferum HOM05D006048 ORTHO05D007642 1.5e-65 255.4 367 39.0
Aa31LG2G11800 Aethionema arabicum HOM05D006048 ORTHO05D007642 4.4e-65 253.8 697 31.6
CARHR284550 Cardamine hirsuta HOM05D006048 ORTHO05D007642 9.1e-63 246.1 723 29.0
C09p24290 Brassica napus HOM05D006048 ORTHO05D007642 2.0e-62 245.0 516 33.3
BcaC04g22032 Brassica carinata HOM05D006048 ORTHO05D007642 1.7e-61 241.9 522 32.8
BcaB07g31106 Brassica carinata HOM05D006048 ORTHO05D007642 1.5e-60 238.8 721 29.3
BolC9t55346H Brassica oleracea HOM05D006048 ORTHO05D007642 4.2e-60 237.3 532 32.5
A09p19290 Brassica napus HOM05D006048 ORTHO05D007642 5.5e-60 236.9 707 29.4
AT1G54920 Arabidopsis thaliana HOM05D006048 ORTHO05D007642 1.2e-59 235.7 729 29.8
ATR0626G180 Amborella trichopoda HOM05D006048 ORTHO05D007642 1.0e-58 232.6 368 37.5
BraA09t37546Z Brassica rapa HOM05D006048 ORTHO05D007642 1.5e-57 228.8 719 29.6
AL1G65400 Arabidopsis lyrata HOM05D006048 ORTHO05D007642 1.7e-56 225.3 702 29.6
Lj9A29T9 Lonicera japonica HOM05D006048 ORTHO05D007642 9.2e-47 193.0 332 40.1
Lj9A18T10 Lonicera japonica HOM05D006048 ORTHO05D007642 3.5e-46 191.0 332 39.8
Atru.chr2.428 Acer truncatum HOM05D006048 ORTHO05D007642 4.6e-46 190.7 182 51.1
CDE05G2441 Ceratophyllum demersum HOM05D006048 ORTHO05D007642 3.3e-44 184.5 372 32.3
Os11g0148400 Oryza sativa ssp. japonica HOM05D006048 ORTHO05D007642 2.8e-43 181.4 407 30.7
CiPaw.07G016800 Carya illinoinensis HOM05D006048 ORTHO05D007642 4.1e-39 167.5 303 37.6
SEGI_14627 Sequoiadendron giganteum HOM05D006048 ORTHO05D007642 3.5e-38 164.5 481 27.9
Atru.chr2.429 Acer truncatum HOM05D006048 ORTHO05D007642 6.8e-34 150.2 222 41.4
Psat7g077840 Pisum sativum HOM05D006048 ORTHO05D007642 2.0e-33 148.7 177 44.6
Manes.08G121600 Manihot esculenta HOM05D006048 ORTHO05D007642 8.3e-32 143.3 357 33.6
HPP92_011303 Vanilla planifolia HOM05D006048 ORTHO05D007642 1.9e-28 132.1 388 29.4
HPP92_011281 Vanilla planifolia HOM05D006048 ORTHO05D007642 2.5e-28 131.7 392 29.1
Mapoly0011s0030 Marchantia polymorpha HOM05D006048 ORTHO05D007642 4.3e-28 131.0 239 30.1
CDE05G0200 Ceratophyllum demersum HOM05D006048 ORTHO05D007642 9.5e-28 129.8 276 30.8
AagrBONN_evm.TU.Sc2ySwM_344.3982 Anthoceros agrestis HOM05D006048 ORTHO05D007642 9.9e-25 119.8 263 30.4
MBI19_g40207_MAGBIO Magnolia biondii HOM05D006048 ORTHO05D007642 8.4e-24 116.7 265 33.2
CiPaw.08G165500 Carya illinoinensis HOM05D006048 ORTHO05D007642 1.2e-17 96.3 73 53.4
Actinidia01443 Actinidia chinensis HOM05D006048 ORTHO05D007642 5.4e-15 87.4 177 36.2
SMO203G0156 Selaginella moellendorffii HOM05D006048 ORTHO05D007642 7.3e-12 77.0 194 26.8
MBI12_g31451_MAGBIO Magnolia biondii HOM05D006048 ORTHO05D007642 2.6e-09 68.6 98 43.9


User provided reference genes

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