Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu017456.1 Olea europaea HOM05D006615 ORTHO05D007999 2.8e-118 428.7 232 100.0
Oeu014828.1 Olea europaea HOM05D006615 ORTHO05D007999 4.7e-89 331.6 228 77.2
MSTRG.2870 Avicennia marina HOM05D006615 ORTHO05D007999 6.6e-83 311.2 228 71.9
Cc07_g06140 Coffea canephora HOM05D006615 ORTHO05D007999 4.4e-79 298.5 227 74.9
Migut.H00418 Erythranthe guttata HOM05D006615 ORTHO05D007999 1.7e-78 296.6 228 73.2
Peaxi162Scf00549g00014 Petunia axillaris HOM05D006615 ORTHO05D007999 2.4e-77 292.7 216 76.9
vmacro05309 Vaccinium macrocarpon HOM05D006615 ORTHO05D007999 9.2e-77 290.8 227 69.2
CAN.G370.40 Capsicum annuum HOM05D006615 ORTHO05D007999 3.5e-76 288.9 216 76.4
Nitab4.5_0002765g0020 Nicotiana tabacum HOM05D006615 ORTHO05D007999 1.0e-75 287.3 216 75.9
Sopen02g037800 Solanum pennellii HOM05D006615 ORTHO05D007999 1.3e-75 287.0 221 73.8
Solyc02g093220.3 Solanum lycopersicum HOM05D006615 ORTHO05D007999 2.3e-75 286.2 221 73.3
PGSC0003DMG400004030 Solanum tuberosum HOM05D006615 ORTHO05D007999 6.6e-75 284.6 216 74.5
Oeu049899.1 Olea europaea HOM05D006615 ORTHO05D007999 1.5e-74 283.5 219 72.6
Rhsim10G0115300 Rhododendron simsii HOM05D006615 ORTHO05D007999 1.5e-74 283.5 227 69.2
Nitab4.5_0002694g0020 Nicotiana tabacum HOM05D006615 ORTHO05D007999 1.9e-74 283.1 216 75.0
Actinidia12040 Actinidia chinensis HOM05D006615 ORTHO05D007999 3.6e-73 278.9 220 62.7
GSVIVG01022099001 Vitis vinifera HOM05D006615 ORTHO05D007999 4.7e-73 278.5 226 61.5
Nn5g30349 Nelumbo nucifera HOM05D006615 ORTHO05D007999 1.1e-72 277.3 229 67.2
HanXRQChr09g0263661 Helianthus annuus HOM05D006615 ORTHO05D007999 5.2e-72 275.0 226 69.9
CSS0020579 Camellia sinensis var. sinensis HOM05D006615 ORTHO05D007999 1.5e-71 273.5 227 64.3
TAR625G0931 Trochodendron aralioides HOM05D006615 ORTHO05D007999 1.5e-71 273.5 226 66.4
TAR381G0796 Trochodendron aralioides HOM05D006615 ORTHO05D007999 1.3e-70 270.4 227 66.1
QL06p040870 Quercus lobata HOM05D006615 ORTHO05D007999 1.7e-70 270.0 224 69.6
Lsat_1_v5_gn_4_164980 Lactuca sativa HOM05D006615 ORTHO05D007999 2.9e-70 269.2 225 69.8
Atru.chr3.300 Acer truncatum HOM05D006615 ORTHO05D007999 8.3e-70 267.7 215 70.7
Haze_15377 Corylus avellana HOM05D006615 ORTHO05D007999 1.1e-69 267.3 223 66.8
Sabra05G0110900 Salix brachista HOM05D006615 ORTHO05D007999 4.1e-69 265.4 226 65.5
Sabra07G0040600 Salix brachista HOM05D006615 ORTHO05D007999 4.1e-69 265.4 224 58.5
Ciclev10026421m.g Citrus clementina HOM05D006615 ORTHO05D007999 7.1e-69 264.6 214 68.2
Prupe.7G131100 Prunus persica HOM05D006615 ORTHO05D007999 7.1e-69 264.6 214 71.0
COL.COLO4_11446 Corchorus olitorius HOM05D006615 ORTHO05D007999 1.2e-68 263.8 216 68.5
CDE02G1946 Ceratophyllum demersum HOM05D006615 ORTHO05D007999 4.6e-68 261.9 225 64.4
Duzib147G0216 Durio zibethinus HOM05D006615 ORTHO05D007999 4.6e-68 261.9 225 65.3
ClCG02G012310 Citrullus lanatus HOM05D006615 ORTHO05D007999 6.0e-68 261.5 225 64.9
MD02G1174700 Malus domestica HOM05D006615 ORTHO05D007999 1.0e-67 260.8 214 70.1
ATR0800G077 Amborella trichopoda HOM05D006615 ORTHO05D007999 1.3e-67 260.4 224 67.0
FAN23G1998 Fragaria x ananassa HOM05D006615 ORTHO05D007999 1.7e-67 260.0 214 69.2
FAN28G0965 Fragaria x ananassa HOM05D006615 ORTHO05D007999 1.7e-67 260.0 214 69.2
Gohir.D12G070500 Gossypium hirsutum HOM05D006615 ORTHO05D007999 1.7e-67 260.0 222 61.7
Gorai.008G077500 Gossypium raimondii HOM05D006615 ORTHO05D007999 1.7e-67 260.0 222 61.7
RcHm_v2.0_Chr2g0105951 Rosa chinensis HOM05D006615 ORTHO05D007999 1.7e-67 260.0 214 68.7
Gohir.A12G072600 Gossypium hirsutum HOM05D006615 ORTHO05D007999 2.3e-67 259.6 222 66.7
MD15G1285700 Malus domestica HOM05D006615 ORTHO05D007999 2.3e-67 259.6 214 69.2
Gohir.A02G156700 Gossypium hirsutum HOM05D006615 ORTHO05D007999 3.0e-67 259.2 216 67.1
AUR62001910 Chenopodium quinoa HOM05D006615 ORTHO05D007999 3.9e-67 258.8 220 58.6
FAN26G2627 Fragaria x ananassa HOM05D006615 ORTHO05D007999 5.1e-67 258.5 214 68.7
FvH4_1g16240 Fragaria vesca HOM05D006615 ORTHO05D007999 8.6e-67 257.7 216 67.6
THA.LOC104821250 Tarenaya hassleriana HOM05D006615 ORTHO05D007999 8.6e-67 257.7 220 66.8
Gorai.003G025500 Gossypium raimondii HOM05D006615 ORTHO05D007999 1.1e-66 257.3 216 66.7
BcaB02g09933 Brassica carinata HOM05D006615 ORTHO05D007999 1.5e-66 256.9 221 65.2
AT5G67140 Arabidopsis thaliana HOM05D006615 ORTHO05D007999 1.9e-66 256.5 221 66.1
Cpa.g.sc55.125 Carica papaya HOM05D006615 ORTHO05D007999 1.9e-66 256.5 216 58.3
Hma1.2p1_0670F.1_g200450 Hydrangea macrophylla HOM05D006615 ORTHO05D007999 1.9e-66 256.5 228 56.6
DCAR_010880 Daucus carota HOM05D006615 ORTHO05D007999 2.5e-66 256.1 231 64.9
Lj4C151G8 Lonicera japonica HOM05D006615 ORTHO05D007999 2.5e-66 256.1 211 66.8
AL8G44220 Arabidopsis lyrata HOM05D006615 ORTHO05D007999 3.3e-66 255.8 221 65.6
AUR62003898 Chenopodium quinoa HOM05D006615 ORTHO05D007999 3.3e-66 255.8 220 57.7
CsaV3_2G016460 Cucumis sativus L. HOM05D006615 ORTHO05D007999 3.3e-66 255.8 212 65.6
Gohir.D03G024000 Gossypium hirsutum HOM05D006615 ORTHO05D007999 3.3e-66 255.8 216 66.7
Ah.03g145470 Amaranthus hybridus HOM05D006615 ORTHO05D007999 4.3e-66 255.4 217 57.6
CSS0005072 Camellia sinensis var. sinensis HOM05D006615 ORTHO05D007999 4.3e-66 255.4 226 55.8
Carub.0008s2737 Capsella rubella HOM05D006615 ORTHO05D007999 4.3e-66 255.4 221 65.2
CDE04G2757 Ceratophyllum demersum HOM05D006615 ORTHO05D007999 4.3e-66 255.4 225 63.1
BraA07t29407Z Brassica rapa HOM05D006615 ORTHO05D007999 1.2e-65 253.8 221 63.8
Aqoxy5G01194 Aquilegia oxysepala HOM05D006615 ORTHO05D007999 1.6e-65 253.4 223 55.2
A07p16820 Brassica napus HOM05D006615 ORTHO05D007999 1.6e-65 253.4 221 63.8
Potri.005G140000 Populus trichocarpa HOM05D006615 ORTHO05D007999 1.6e-65 253.4 215 65.6
Thecc.01G059100 Theobroma cacao HOM05D006615 ORTHO05D007999 1.6e-65 253.4 210 68.1
Sp2g29550 Schrenkiella parvula HOM05D006615 ORTHO05D007999 2.8e-65 252.7 219 64.4
Thhalv10004869m.g Eutrema salsugineum HOM05D006615 ORTHO05D007999 3.6e-65 252.3 221 62.9
FAN19G1431 Fragaria x ananassa HOM05D006615 ORTHO05D007999 3.6e-65 252.3 216 66.7
CARHR280510 Cardamine hirsuta HOM05D006615 ORTHO05D007999 4.7e-65 251.9 221 65.2
C07p24600 Brassica napus HOM05D006615 ORTHO05D007999 6.2e-65 251.5 220 63.6
BolC7t42980H Brassica oleracea HOM05D006615 ORTHO05D007999 6.2e-65 251.5 220 63.6
MELO3C020856.2 Cucumis melo HOM05D006615 ORTHO05D007999 6.2e-65 251.5 232 61.6
Sc03g0001700 Simmondsia chinensis HOM05D006615 ORTHO05D007999 6.2e-65 251.5 219 55.7
Dinv26838 Davidia involucrata HOM05D000573 ORTHO05D000425 4.0e-64 248.8 166 69.3
Manes.12G104500 Manihot esculenta HOM05D006615 ORTHO05D007999 4.0e-64 248.8 225 63.6
ECA232G2507 Erigeron canadensis HOM05D002761 ORTHO05D003351 1.2e-63 247.3 171 68.4
Lalb_Chr16g0378591 Lupinus albus HOM05D006615 ORTHO05D007999 2.6e-63 246.1 207 69.6
Sed0009491 Sechium edule HOM05D006615 ORTHO05D007999 2.6e-63 246.1 214 62.1
Medtr5g016890 Medicago truncatula HOM05D006615 ORTHO05D007999 3.4e-63 245.7 207 68.1
PSO170G0414 Papaver somniferum HOM05D006615 ORTHO05D007999 3.4e-63 245.7 230 52.2
HPP92_026439 Vanilla planifolia HOM05D006615 ORTHO05D007999 7.6e-63 244.6 210 64.3
Lj2g0018871 Lotus japonicus HOM05D006615 ORTHO05D007999 1.3e-62 243.8 204 69.1
Aa31LG1G15650 Aethionema arabicum HOM05D006615 ORTHO05D007999 1.7e-62 243.4 221 62.0
Cfa004036 Carpinus fangiana HOM05D006615 ORTHO05D007999 1.7e-62 243.4 206 66.5
TPR.G26907 Trifolium pratense HOM05D006615 ORTHO05D007999 2.9e-62 242.7 207 59.9
Glyma.11G054300 Glycine max HOM05D006615 ORTHO05D007999 3.8e-62 242.3 209 67.9
PSO210G0040 Papaver somniferum HOM05D006615 ORTHO05D007999 6.4e-62 241.5 230 51.3
MELO3C020857.2 Cucumis melo HOM05D006615 ORTHO05D007999 1.9e-61 240.0 209 65.1
Psat2g167840 Pisum sativum HOM05D006615 ORTHO05D007999 1.9e-61 240.0 207 59.4
Glyma.01G187800 Glycine max HOM05D006615 ORTHO05D007999 2.4e-61 239.6 200 70.0
CsaV3_2G016470 Cucumis sativus L. HOM05D006615 ORTHO05D007999 3.2e-61 239.2 209 65.1
CiPaw.01G016200 Carya illinoinensis HOM05D006615 ORTHO05D007999 5.4e-61 238.4 209 54.1
Hund16348 Selenicereus undatus HOM05D006615 ORTHO05D007999 5.4e-61 238.4 271 45.8
SGA_v2.0_scaffold15G07326 Striga asiatica HOM05D006615 ORTHO05D007999 6.0e-60 235.0 228 64.0
Atru.chr3.288 Acer truncatum HOM05D006615 ORTHO05D007999 1.3e-59 233.8 191 70.2
arahy.Tifrunner.gnm1.ann1.XJ9ES7 Arachis hypogaea HOM05D006615 ORTHO05D007999 2.3e-59 233.0 207 66.7
Phvul.002G017400 Phaseolus vulgaris HOM05D006615 ORTHO05D007999 2.3e-59 233.0 207 65.2
Lalb_Chr05g0213321 Lupinus albus HOM05D006615 ORTHO05D007999 8.7e-59 231.1 214 55.6
TWI09G1033 Tripterygium wilfordii HOM05D006615 ORTHO05D007999 1.5e-58 230.3 215 52.1
arahy.Tifrunner.gnm1.ann1.8K3JW9 Arachis hypogaea HOM05D006615 ORTHO05D007999 1.9e-58 229.9 207 66.2
VMungo1215G1750 Vigna mungo HOM05D006615 ORTHO05D007999 2.5e-58 229.6 207 66.2
Eucgr.H01687 Eucalyptus grandis HOM05D006615 ORTHO05D007999 5.8e-55 218.4 209 51.2
SEGI_10636 Sequoiadendron giganteum HOM05D006615 ORTHO05D007999 1.7e-54 216.9 213 58.2
Actinidia36482 Actinidia chinensis HOM05D006615 ORTHO05D007999 2.4e-53 213.0 210 56.7
Os06g0166000 Oryza sativa ssp. japonica HOM05D006615 ORTHO05D007999 3.2e-53 212.6 216 47.7
Zm00001eb375600 Zea mays HOM05D006615 ORTHO05D007999 1.1e-48 197.6 217 45.6
CANSAT01G0297 Cannabis sativa HOM05D006615 ORTHO05D007999 3.1e-48 196.1 214 49.1
Pp3c7_15700 Physcomitrium patens HOM05D006615 ORTHO05D007999 8.4e-46 188.0 206 53.4
unitig_748.g8604 Utricularia gibba HOM05D002191 ORTHO05D007999 2.7e-44 183.0 166 53.6
AagrBONN_evm.TU.Sc2ySwM_344.5234 Anthoceros agrestis HOM05D006615 ORTHO05D007999 6.2e-41 171.8 218 49.5
Mapoly0005s0095 Marchantia polymorpha HOM05D006615 ORTHO05D007999 8.1e-41 171.4 216 39.8
Aqoxy6G01271 Aquilegia oxysepala HOM05D006615 ORTHO05D007999 5.3e-40 168.7 225 51.1
SMO164G0246 Selaginella moellendorffii HOM05D006615 ORTHO05D007999 1.5e-31 140.6 218 44.0
TWI73G1298 Tripterygium wilfordii HOM05D006615 ORTHO05D007999 2.0e-31 140.2 134 48.5
Potri.007G045601 Populus trichocarpa HOM05D006615 ORTHO05D007999 5.5e-29 132.1 97 62.9
MSTRG.3434 Avicennia marina HOM05D006615 ORTHO05D007999 2.7e-20 103.2 104 70.2
ClCG02G012330 Citrullus lanatus HOM05D006615 ORTHO05D007999 7.9e-12 75.1 78 47.4
Phvul.008G146300 Phaseolus vulgaris HOM05D006615 ORTHO05D007999 2.0e-10 70.5 45 66.7
Aqoxy4G02446 Aquilegia oxysepala HOM05D001818 ORTHO05D001780 8.5e-06 55.1 95 34.7


User provided reference genes

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