Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu017421.1 Olea europaea HOM05D005457 ORTHO05D006350 0.0e+00 1111.7 538 100.0
Cc00_g21960 Coffea canephora HOM05D005457 ORTHO05D006350 1.1e-64 251.9 584 34.2
Dinv34321 Davidia involucrata HOM05D005457 ORTHO05D006350 3.5e-63 246.9 345 43.2
Dinv17076 Davidia involucrata HOM05D005457 ORTHO05D006350 1.1e-61 241.9 597 32.7
Dinv43020 Davidia involucrata HOM05D005457 ORTHO05D006350 1.1e-61 241.9 597 32.7
Dinv43077 Davidia involucrata HOM05D005457 ORTHO05D006350 1.1e-61 241.9 597 32.7
SalBow2G3533 Salvia bowleyana HOM05D005457 ORTHO05D006350 1.2e-58 231.9 488 36.1
Peaxi162Scf00433g00116 Petunia axillaris HOM05D005457 ORTHO05D006350 1.5e-58 231.5 558 32.1
PGSC0003DMG400006701 Solanum tuberosum HOM05D005457 ORTHO05D006350 8.4e-57 225.7 528 33.1
Sopen09g014590 Solanum pennellii HOM05D005457 ORTHO05D006350 1.4e-56 224.9 528 32.6
CAN.G1002.16 Capsicum annuum HOM05D005457 ORTHO05D006350 5.5e-56 223.0 491 33.8
Solyc09g031650.3 Solanum lycopersicum HOM05D005457 ORTHO05D006350 9.3e-56 222.2 532 32.7
SGA_v2.0_scaffold199G41161 Striga asiatica HOM05D005457 ORTHO05D006350 2.1e-55 221.1 387 39.8
Hma1.2p1_0543F.1_g175290 Hydrangea macrophylla HOM05D005457 ORTHO05D006350 2.7e-55 220.7 353 40.2
Actinidia25123 Actinidia chinensis HOM05D005457 ORTHO05D006350 4.6e-55 219.9 521 35.7
GSVIVG01024823001 Vitis vinifera HOM05D005457 ORTHO05D006350 7.4e-53 212.6 345 39.1
Atru.chr3.4038 Acer truncatum HOM05D005457 ORTHO05D006350 8.2e-52 209.1 341 39.3
Migut.N00905 Erythranthe guttata HOM05D005457 ORTHO05D006350 1.8e-51 208.0 504 35.7
CSS0006949 Camellia sinensis var. sinensis HOM05D005457 ORTHO05D006350 4.1e-51 206.8 588 31.8
CSS0035455 Camellia sinensis var. sinensis HOM05D005457 ORTHO05D006350 1.5e-50 204.9 585 31.6
Manes.02G123500 Manihot esculenta HOM05D005457 ORTHO05D006350 1.5e-45 188.3 548 31.0
Sed0019872 Sechium edule HOM05D005457 ORTHO05D006350 3.3e-45 187.2 403 36.0
QL01p028955 Quercus lobata HOM05D005457 ORTHO05D006350 4.3e-45 186.8 562 31.9
Haze_24232 Corylus avellana HOM05D005457 ORTHO05D006350 7.4e-45 186.0 455 35.6
Lj1C143T9 Lonicera japonica HOM05D005457 ORTHO05D006350 2.8e-44 184.1 554 31.8
MELO3C020581.2 Cucumis melo HOM05D005457 ORTHO05D006350 3.7e-44 183.7 411 35.5
ClCG03G001030 Citrullus lanatus HOM05D005457 ORTHO05D006350 8.2e-44 182.6 408 35.8
CsaV3_1G035890 Cucumis sativus L. HOM05D005457 ORTHO05D006350 1.1e-43 182.2 411 35.3
Glyma.12G007800 Glycine max HOM05D005457 ORTHO05D006350 3.1e-43 180.6 509 31.6
MD11G1084500 Malus domestica HOM05D005457 ORTHO05D006350 2.2e-41 174.5 488 31.6
Prupe.6G064800 Prunus persica HOM05D005457 ORTHO05D006350 5.0e-41 173.3 567 30.5
Potri.009G040500 Populus trichocarpa HOM05D005457 ORTHO05D006350 8.5e-41 172.6 327 34.9
Phvul.011G009900 Phaseolus vulgaris HOM05D005457 ORTHO05D006350 1.1e-40 172.2 549 29.1
FvH4_3g37470 Fragaria vesca HOM05D005457 ORTHO05D006350 1.4e-40 171.8 525 32.4
Nn2g13569 Nelumbo nucifera HOM05D005457 ORTHO05D006350 3.2e-40 170.6 356 37.1
Gohir.D03G119400 Gossypium hirsutum HOM05D005457 ORTHO05D006350 5.5e-40 169.9 330 38.5
Ciclev10027683m.g Citrus clementina HOM05D005457 ORTHO05D006350 9.4e-40 169.1 539 30.6
Lj2A1073T53 Lonicera japonica HOM05D005457 ORTHO05D006350 1.6e-39 168.3 609 29.4
Lj3g0007084 Lotus japonicus HOM05D005457 ORTHO05D006350 1.6e-39 168.3 508 31.9
FAN21G0431 Fragaria x ananassa HOM05D005457 ORTHO05D006350 2.1e-39 167.9 464 33.0
Aqoxy1G00759 Aquilegia oxysepala HOM05D005457 ORTHO05D006350 2.7e-39 167.5 364 35.7
Rhsim13G0075000 Rhododendron simsii HOM05D005457 ORTHO05D006350 2.7e-39 167.5 372 34.7
CiPaw.13G084000 Carya illinoinensis HOM05D005457 ORTHO05D006350 3.6e-39 167.2 314 36.0
MD03G1079900 Malus domestica HOM05D005457 ORTHO05D006350 3.6e-39 167.2 498 30.5
Gorai.003G125700 Gossypium raimondii HOM05D005457 ORTHO05D006350 4.6e-39 166.8 330 38.2
vmacro03007 Vaccinium macrocarpon HOM05D005457 ORTHO05D006350 4.6e-39 166.8 510 31.4
VMungo1127G1417 Vigna mungo HOM05D005457 ORTHO05D006350 4.6e-39 166.8 541 28.5
Ca_19579_v3 Cicer arietinum L. HOM05D005457 ORTHO05D006350 6.1e-39 166.4 528 31.4
Sabra09G0028400 Salix brachista HOM05D005457 ORTHO05D006350 1.0e-38 165.6 361 34.3
Lalb_Chr01g0000381 Lupinus albus HOM05D005457 ORTHO05D006350 2.3e-38 164.5 290 36.6
FAN11G1716 Fragaria x ananassa HOM05D005457 ORTHO05D006350 3.9e-38 163.7 545 31.4
TAR369G0749 Trochodendron aralioides HOM05D005457 ORTHO05D006350 1.1e-37 162.2 345 35.7
FAN16G3594 Fragaria x ananassa HOM05D005457 ORTHO05D006350 1.5e-37 161.8 535 31.2
Gohir.A03G047700 Gossypium hirsutum HOM05D005457 ORTHO05D006350 9.7e-37 159.1 520 31.9
Medtr4g037575 Medicago truncatula HOM05D005457 ORTHO05D006350 9.7e-37 159.1 510 29.6
Thecc.09G309000 Theobroma cacao HOM05D005457 ORTHO05D006350 1.7e-36 158.3 582 29.6
EL10Ac7g16099 Beta vulgaris HOM05D005457 ORTHO05D006350 6.3e-36 156.4 413 31.7
Potri.001G247100 Populus trichocarpa HOM05D005457 ORTHO05D006350 6.3e-36 156.4 347 34.3
FAN25G1264 Fragaria x ananassa HOM05D005457 ORTHO05D006350 8.2e-36 156.0 412 33.5
RcHm_v2.0_Chr5g0067361 Rosa chinensis HOM05D005457 ORTHO05D006350 8.2e-36 156.0 393 33.1
TPR.G3642 Trifolium pratense HOM05D005457 ORTHO05D006350 8.2e-36 156.0 558 29.6
Sc12g0001060 Simmondsia chinensis HOM05D005457 ORTHO05D006350 1.1e-35 155.6 526 30.4
Psat7g154880 Pisum sativum HOM05D005457 ORTHO05D006350 1.8e-35 154.8 509 30.3
Glyma.09G228800 Glycine max HOM05D005457 ORTHO05D006350 2.4e-35 154.5 499 30.1
AUR62020069 Chenopodium quinoa HOM05D005457 ORTHO05D006350 9.1e-35 152.5 462 31.2
HanXRQChr08g0237081 Helianthus annuus HOM05D005457 ORTHO05D006350 1.5e-34 151.8 427 33.7
Gohir.D03G119500 Gossypium hirsutum HOM05D005457 ORTHO05D006350 2.6e-34 151.0 315 36.5
MBI14_g32923_MAGBIO Magnolia biondii HOM05D005457 ORTHO05D006350 5.9e-34 149.8 386 33.9
ECA247G2917 Erigeron canadensis HOM05D005457 ORTHO05D006350 1.3e-33 148.7 541 31.1
DCAR_027735 Daucus carota HOM05D005457 ORTHO05D006350 1.7e-33 148.3 334 32.9
Gohir.A03G047600 Gossypium hirsutum HOM05D005457 ORTHO05D006350 1.7e-33 148.3 344 34.6
Gorai.003G125900 Gossypium raimondii HOM05D005457 ORTHO05D006350 2.2e-33 147.9 328 35.4
TAR623G1322 Trochodendron aralioides HOM05D005457 ORTHO05D006350 2.2e-33 147.9 343 32.9
Hund11609 Selenicereus undatus HOM05D005457 ORTHO05D006350 6.5e-33 146.4 453 30.9
arahy.Tifrunner.gnm1.ann1.L17SH6 Arachis hypogaea HOM05D005457 ORTHO05D006350 1.9e-32 144.8 292 37.3
AUR62001711 Chenopodium quinoa HOM05D005457 ORTHO05D006350 2.7e-31 141.0 465 29.9
arahy.Tifrunner.gnm1.ann1.U9UY67 Arachis hypogaea HOM05D005457 ORTHO05D006350 6.1e-31 139.8 291 35.1
Nn2g11331 Nelumbo nucifera HOM05D005457 ORTHO05D006350 1.7e-28 131.7 389 31.1
Eucgr.B02283 Eucalyptus grandis HOM05D005457 ORTHO05D006350 2.8e-28 131.0 532 28.4
DCAR_027737 Daucus carota HOM05D005457 ORTHO05D006350 2.4e-27 127.9 279 33.3
Lsat_1_v5_gn_9_25441 Lactuca sativa HOM05D005457 ORTHO05D006350 3.1e-27 127.5 497 31.2
Actinidia08557 Actinidia chinensis HOM05D005457 ORTHO05D006350 1.2e-26 125.6 230 36.1
THA.LOC104799410 Tarenaya hassleriana HOM05D005457 ORTHO05D006350 1.5e-24 118.6 209 36.4
DCAR_027739 Daucus carota HOM05D005457 ORTHO05D006350 4.2e-24 117.1 369 28.5
PSO170G6745 Papaver somniferum HOM05D005457 ORTHO05D006350 4.2e-24 117.1 363 30.0
PSO782G3368 Papaver somniferum HOM05D005457 ORTHO05D006350 5.5e-24 116.7 318 32.1
Cpa.g.sc112.91 Carica papaya HOM05D005457 ORTHO05D006350 4.0e-22 110.5 104 51.0
SHI05894 Sapria himalayana HOM05D005457 ORTHO05D006350 6.7e-22 109.8 239 33.5
ATR0618G328 Amborella trichopoda HOM05D005457 ORTHO05D006350 8.8e-22 109.4 330 31.2
CDE09G0768 Ceratophyllum demersum HOM05D005457 ORTHO05D006350 2.2e-20 104.8 138 44.9
Ah.14g082630 Amaranthus hybridus HOM05D005457 ORTHO05D006350 1.1e-19 102.4 402 26.6
CDE02G3816 Ceratophyllum demersum HOM05D034644 ORTHO05D006350 3.1e-19 100.9 144 41.0
HPP92_001490 Vanilla planifolia HOM05D005457 ORTHO05D006350 2.7e-15 87.8 129 38.0
unitig_27.g24810 Utricularia gibba HOM05D005457 ORTHO05D006350 1.3e-12 79.0 259 30.1
Cpa.g.sc112.90 Carica papaya HOM05D005457 ORTHO05D006350 5.4e-11 73.6 155 32.9


User provided reference genes

Program Settings