Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu017360.1 Olea europaea HOM05D004143 ORTHO05D004816 4.1e-270 934.1 462 100.0
Oeu017361.2 Olea europaea HOM05D004143 ORTHO05D004816 1.8e-225 785.8 453 85.0
MSTRG.23 Avicennia marina HOM05D004143 ORTHO05D004816 9.3e-222 773.5 446 83.6
Lj3A892T30 Lonicera japonica HOM05D004143 ORTHO05D004816 2.0e-216 755.7 459 81.3
Migut.F00972 Erythranthe guttata HOM05D004143 ORTHO05D004816 3.4e-216 755.0 451 80.7
SalBow4G1948 Salvia bowleyana HOM05D004143 ORTHO05D004816 5.8e-216 754.2 473 78.2
Rhsim03G0218000 Rhododendron simsii HOM05D004143 ORTHO05D004816 1.3e-215 753.1 454 81.1
Hma1.2p1_0115F.1_g055680 Hydrangea macrophylla HOM05D004143 ORTHO05D004816 8.4e-215 750.4 458 80.1
CAN.G303.51 Capsicum annuum HOM05D004143 ORTHO05D004816 1.4e-214 749.6 461 79.4
Cc02_g00660 Coffea canephora HOM05D004143 ORTHO05D004816 1.9e-214 749.2 449 80.2
TAR375G1015 Trochodendron aralioides HOM05D004143 ORTHO05D004816 1.9e-214 749.2 461 79.4
vmacro06470 Vaccinium macrocarpon HOM05D004143 ORTHO05D004816 1.3e-212 743.0 445 82.0
Nitab4.5_0004582g0010 Nicotiana tabacum HOM05D004143 ORTHO05D004816 2.3e-212 742.3 460 78.9
Actinidia34284 Actinidia chinensis HOM05D004143 ORTHO05D004816 3.0e-212 741.9 456 80.0
Dinv17282 Davidia involucrata HOM05D004143 ORTHO05D004816 3.0e-212 741.9 461 79.8
Actinidia08713 Actinidia chinensis HOM05D004143 ORTHO05D004816 3.9e-212 741.5 457 80.5
Nitab4.5_0000021g0150 Nicotiana tabacum HOM05D004143 ORTHO05D004816 3.9e-212 741.5 459 79.5
vmacro06469 Vaccinium macrocarpon HOM05D004143 ORTHO05D004816 3.9e-212 741.5 448 80.4
Sopen03g021740 Solanum pennellii HOM05D004143 ORTHO05D004816 2.2e-210 735.7 458 78.6
CSS0027564 Camellia sinensis var. sinensis HOM05D004143 ORTHO05D004816 1.4e-209 733.0 450 81.1
TAR629G3485 Trochodendron aralioides HOM05D004143 ORTHO05D004816 1.4e-209 733.0 463 77.5
Manes.01G045000 Manihot esculenta HOM05D004143 ORTHO05D004816 1.8e-209 732.6 459 78.9
PGSC0003DMG400000551 Solanum tuberosum HOM05D004143 ORTHO05D004816 2.4e-209 732.3 459 77.8
Potri.012G005100 Populus trichocarpa HOM05D004143 ORTHO05D004816 7.7e-208 727.2 449 79.7
TWI23G0162 Tripterygium wilfordii HOM05D004143 ORTHO05D004816 1.0e-207 726.9 459 78.4
Sabra15G0000900 Salix brachista HOM05D004143 ORTHO05D004816 1.7e-207 726.1 447 79.9
COL.COLO4_04975 Corchorus olitorius HOM05D004143 ORTHO05D004816 2.2e-207 725.7 462 78.1
Thecc.05G121800 Theobroma cacao HOM05D004143 ORTHO05D004816 2.9e-207 725.3 461 77.4
Lsat_1_v5_gn_2_3341 Lactuca sativa HOM05D004143 ORTHO05D004816 3.8e-207 724.9 454 78.9
Ciclev10019944m.g Citrus clementina HOM05D004143 ORTHO05D004816 1.1e-206 723.4 459 76.7
Sabra12G0000800 Salix brachista HOM05D004143 ORTHO05D004816 1.9e-206 722.6 449 79.5
DCAR_010563 Daucus carota HOM05D004143 ORTHO05D004816 3.2e-206 721.8 457 79.2
GSVIVG01038674001 Vitis vinifera HOM05D004143 ORTHO05D004816 3.2e-206 721.8 456 78.1
Cpa.g.sc3.179 Carica papaya HOM05D004143 ORTHO05D004816 4.2e-206 721.5 451 78.7
Sabra12G0007100 Salix brachista HOM05D004143 ORTHO05D004816 1.6e-205 719.5 449 79.1
Cfa016134 Carpinus fangiana HOM05D004143 ORTHO05D004816 6.1e-205 717.6 456 76.8
FAN10G3640 Fragaria x ananassa HOM05D004143 ORTHO05D004816 6.7e-204 714.1 453 77.3
FAN10G4294 Fragaria x ananassa HOM05D004143 ORTHO05D004816 6.7e-204 714.1 453 77.3
PGR142G3661 Punica granatum HOM05D004143 ORTHO05D004816 8.8e-204 713.8 458 77.1
Rhsim03G0217900 Rhododendron simsii HOM05D004143 ORTHO05D004816 1.5e-203 713.0 465 76.1
Actinidia18690 Actinidia chinensis HOM05D004143 ORTHO05D004816 2.0e-203 712.6 463 76.0
CiPaw.05G208300 Carya illinoinensis HOM05D004143 ORTHO05D004816 4.3e-203 711.4 458 77.5
FvH4_7g33230 Fragaria vesca HOM05D004143 ORTHO05D004816 7.4e-203 710.7 459 75.8
DCAR_020387 Daucus carota HOM05D004143 ORTHO05D004816 2.2e-202 709.1 447 77.6
FvH4_7g33150 Fragaria vesca HOM05D004143 ORTHO05D004816 3.7e-202 708.4 458 76.6
RcHm_v2.0_Chr1g0383221 Rosa chinensis HOM05D004143 ORTHO05D004816 3.7e-202 708.4 460 75.0
ClCG10G008670 Citrullus lanatus HOM05D004143 ORTHO05D004816 4.8e-202 708.0 455 76.5
CsaV3_4G009000 Cucumis sativus L. HOM05D004143 ORTHO05D004816 6.3e-202 707.6 451 77.4
PSO063G4813 Papaver somniferum HOM05D004143 ORTHO05D004816 6.3e-202 707.6 458 76.0
DCAR_014598 Daucus carota HOM05D004143 ORTHO05D004816 8.2e-202 707.2 437 79.9
FAN03G2936 Fragaria x ananassa HOM05D004143 ORTHO05D004816 8.2e-202 707.2 453 76.2
FAN03G3145 Fragaria x ananassa HOM05D004143 ORTHO05D004816 8.2e-202 707.2 453 76.2
Gohir.A13G001800 Gossypium hirsutum HOM05D004143 ORTHO05D004816 8.2e-202 707.2 458 76.0
Haze_00327 Corylus avellana HOM05D004143 ORTHO05D004816 2.4e-201 705.7 455 76.0
SGA_v2.0_scaffold18G08489 Striga asiatica HOM05D004143 ORTHO05D004816 4.1e-201 704.9 463 74.1
CANSAT01G3090 Cannabis sativa HOM05D004143 ORTHO05D004816 9.1e-201 703.7 453 75.3
Gohir.D13G001200 Gossypium hirsutum HOM05D004143 ORTHO05D004816 1.2e-200 703.4 458 75.3
Gorai.013G001100 Gossypium raimondii HOM05D004143 ORTHO05D004816 1.2e-200 703.4 458 75.3
TAR629G1812 Trochodendron aralioides HOM05D004143 ORTHO05D004816 1.2e-200 703.4 458 75.1
MELO3C018979.2 Cucumis melo HOM05D004143 ORTHO05D004816 2.0e-200 702.6 459 76.0
MELO3C018981.2 Cucumis melo HOM05D004143 ORTHO05D004816 7.7e-200 700.7 447 77.2
CsaV3_4G009010 Cucumis sativus L. HOM05D004143 ORTHO05D004816 7.7e-200 700.7 447 77.0
FAN01G2649 Fragaria x ananassa HOM05D004143 ORTHO05D004816 1.0e-199 700.3 453 75.9
PSO782G2863 Papaver somniferum HOM05D004143 ORTHO05D004816 1.0e-199 700.3 458 75.1
Prupe.2G321300 Prunus persica HOM05D004143 ORTHO05D004816 1.3e-199 699.9 460 75.0
SGA_v2.0_scaffold44G16868 Striga asiatica HOM05D004143 ORTHO05D004816 1.3e-199 699.9 429 78.8
HanXRQChr08g0225831 Helianthus annuus HOM05D004143 ORTHO05D004816 6.5e-199 697.6 448 74.6
MD01G1230900 Malus domestica HOM05D004143 ORTHO05D004816 6.5e-199 697.6 458 75.8
MD07G1302200 Malus domestica HOM05D004143 ORTHO05D004816 1.1e-198 696.8 449 75.5
Hund09750 Selenicereus undatus HOM05D004143 ORTHO05D004816 1.4e-198 696.4 445 76.9
CANSAT11G0263 Cannabis sativa HOM05D004143 ORTHO05D004816 2.5e-198 695.7 459 73.4
Ciclev10024344m.g Citrus clementina HOM05D004143 ORTHO05D004816 2.5e-198 695.7 449 77.7
Thecc.01G329300 Theobroma cacao HOM05D004143 ORTHO05D004816 4.2e-198 694.9 460 73.9
Atru.chr12.2532 Acer truncatum HOM05D004143 ORTHO05D004816 5.5e-198 694.5 431 79.8
Atru.chr12.2510 Acer truncatum HOM05D004143 ORTHO05D004816 7.2e-198 694.1 429 80.2
TWI23G0209 Tripterygium wilfordii HOM05D004143 ORTHO05D004816 1.2e-197 693.3 457 74.2
Eucgr.K00891 Eucalyptus grandis HOM05D004143 ORTHO05D004816 1.0e-196 690.3 463 72.6
Cfa016133 Carpinus fangiana HOM05D004143 ORTHO05D004816 3.9e-196 688.3 456 73.9
Duzib138G0998 Durio zibethinus HOM05D004143 ORTHO05D004816 8.8e-196 687.2 460 74.3
EL10Ac3g05140 Beta vulgaris HOM05D004143 ORTHO05D004816 4.4e-195 684.9 431 78.0
QL09p006127 Quercus lobata HOM05D004143 ORTHO05D004816 5.7e-195 684.5 479 72.2
THA.LOC104814953 Tarenaya hassleriana HOM05D004143 ORTHO05D004816 5.7e-195 684.5 437 75.5
Lj1g0023378 Lotus japonicus HOM05D004143 ORTHO05D004816 9.7e-195 683.7 459 74.9
arahy.Tifrunner.gnm1.ann1.RI5PYK Arachis hypogaea HOM05D004143 ORTHO05D004816 2.2e-194 682.6 449 75.9
Glyma.04G226100 Glycine max HOM05D004143 ORTHO05D004816 3.7e-194 681.8 454 74.2
Glyma.06G138800 Glycine max HOM05D004143 ORTHO05D004816 3.7e-194 681.8 460 73.7
ATR0579G031 Amborella trichopoda HOM05D004143 ORTHO05D004816 6.3e-194 681.0 429 74.6
arahy.Tifrunner.gnm1.ann1.YIM4MN Arachis hypogaea HOM05D004143 ORTHO05D004816 6.3e-194 681.0 447 76.1
MD01G1230800 Malus domestica HOM05D004143 ORTHO05D004816 6.3e-194 681.0 458 73.8
MD01G1230700 Malus domestica HOM05D004143 ORTHO05D004816 1.1e-193 680.2 449 72.8
Sed0008601 Sechium edule HOM05D004143 ORTHO05D004816 1.1e-193 680.2 445 75.1
Ca_16836_v3 Cicer arietinum L. HOM05D004143 ORTHO05D004816 1.8e-193 679.5 447 74.3
arahy.Tifrunner.gnm1.ann1.JUEJ49 Arachis hypogaea HOM05D004143 ORTHO05D004816 2.4e-193 679.1 432 77.1
Sed0000759 Sechium edule HOM05D004143 ORTHO05D004816 3.1e-193 678.7 445 74.8
arahy.Tifrunner.gnm1.ann1.QS6CEN Arachis hypogaea HOM05D004143 ORTHO05D004816 4.1e-193 678.3 432 76.9
arahy.Tifrunner.gnm1.ann1.XXMI3I Arachis hypogaea HOM05D004143 ORTHO05D004816 4.1e-193 678.3 432 77.3
Medtr3g093270 Medicago truncatula HOM05D004143 ORTHO05D004816 1.2e-192 676.8 460 74.8
Psat0s1240g0080 Pisum sativum HOM05D004143 ORTHO05D004816 7.7e-192 674.1 462 73.6
Sc19g0000410 Simmondsia chinensis HOM05D004143 ORTHO05D004816 8.5e-191 670.6 425 78.1
Glyma.02G221600 Glycine max HOM05D004143 ORTHO05D004816 2.5e-190 669.1 447 74.5
Lj1g0001658 Lotus japonicus HOM05D004143 ORTHO05D004816 2.5e-190 669.1 451 74.7
HPP92_015066 Vanilla planifolia HOM05D004143 ORTHO05D004816 2.5e-190 669.1 443 73.8
CSS0024166 Camellia sinensis var. sinensis HOM05D004143 ORTHO05D004816 3.2e-190 668.7 452 73.7
Lalb_Chr11g0067541 Lupinus albus HOM05D004143 ORTHO05D004816 4.2e-190 668.3 459 73.2
Phvul.009G039900 Phaseolus vulgaris HOM05D004143 ORTHO05D004816 4.2e-190 668.3 438 75.3
VMungo1309G1903 Vigna mungo HOM05D004143 ORTHO05D004816 9.4e-190 667.2 447 74.7
Eucgr.K00457 Eucalyptus grandis HOM05D004143 ORTHO05D004816 2.1e-189 666.0 414 79.5
Aqoxy5G04387 Aquilegia oxysepala HOM05D004143 ORTHO05D004816 4.7e-189 664.8 436 73.6
Carub.0001s1769 Capsella rubella HOM05D004143 ORTHO05D004816 2.0e-187 659.4 430 73.5
Lalb_Chr23g0272031 Lupinus albus HOM05D004143 ORTHO05D004816 2.0e-187 659.4 447 73.6
Ah.13g070980 Amaranthus hybridus HOM05D004143 ORTHO05D004816 3.3e-187 658.7 442 73.8
Medtr3g093290 Medicago truncatula HOM05D004143 ORTHO05D004816 4.4e-187 658.3 447 72.7
Sp1g16050 Schrenkiella parvula HOM05D004143 ORTHO05D004816 5.7e-187 657.9 459 69.5
Thhalv10007558m.g Eutrema salsugineum HOM05D004143 ORTHO05D004816 9.7e-187 657.1 447 70.9
Aa31LG7G3020 Aethionema arabicum HOM05D004143 ORTHO05D004816 1.3e-186 656.8 438 73.1
AL1G30350 Arabidopsis lyrata HOM05D004143 ORTHO05D004816 6.3e-186 654.4 451 69.6
AT1G18000 Arabidopsis thaliana HOM05D004143 ORTHO05D004816 1.1e-185 653.7 447 70.5
AT1G18010 Arabidopsis thaliana HOM05D004143 ORTHO05D004816 1.1e-185 653.7 447 70.5
C08p43580 Brassica napus HOM05D004143 ORTHO05D004816 1.1e-185 653.7 450 71.6
BolC8t51904H Brassica oleracea HOM05D004143 ORTHO05D004816 1.8e-185 652.9 442 71.9
MBI04_g26128_MAGBIO Magnolia biondii HOM05D004143 ORTHO05D004816 1.8e-185 652.9 426 73.2
Gorai.007G115000 Gossypium raimondii HOM05D004143 ORTHO05D004816 2.4e-185 652.5 455 72.1
BraA09t41383Z Brassica rapa HOM05D004143 ORTHO05D004816 5.3e-185 651.4 442 71.7
ClCG10G008690 Citrullus lanatus HOM05D004143 ORTHO05D004816 7.0e-185 651.0 411 77.6
A09p60140 Brassica napus HOM05D004143 ORTHO05D004816 1.6e-184 649.8 448 71.2
CARHR018600 Cardamine hirsuta HOM05D004143 ORTHO05D004816 2.7e-184 649.0 439 71.1
VMungo0647G0805 Vigna mungo HOM05D004143 ORTHO05D004816 1.3e-183 646.7 445 72.6
Phvul.008G188500 Phaseolus vulgaris HOM05D004143 ORTHO05D004816 3.8e-183 645.2 445 72.8
HanXRQChr15g0472111 Helianthus annuus HOM05D004143 ORTHO05D004816 6.5e-183 644.4 448 69.6
Eucgr.K00892 Eucalyptus grandis HOM05D004143 ORTHO05D004816 2.5e-182 642.5 442 71.5
SEGI_09338 Sequoiadendron giganteum HOM05D004143 ORTHO05D004816 4.2e-182 641.7 451 69.2
AUR62028110 Chenopodium quinoa HOM05D004143 ORTHO05D004816 1.2e-179 633.6 408 76.5
AUR62005954 Chenopodium quinoa HOM05D004143 ORTHO05D004816 2.0e-179 632.9 402 77.4
Nn4g24300 Nelumbo nucifera HOM05D004143 ORTHO05D004816 9.8e-179 630.6 392 78.6
ECA233G4741 Erigeron canadensis HOM05D004143 ORTHO05D000001 1.3e-175 620.2 384 79.4
Gohir.A11G102900 Gossypium hirsutum HOM05D004143 ORTHO05D004816 8.0e-173 610.9 455 69.5
MBI04_g26129_MAGBIO Magnolia biondii HOM05D004143 ORTHO05D004816 4.0e-172 608.6 446 69.5
ClCG00G006070 Citrullus lanatus HOM05D004143 ORTHO05D004816 8.8e-172 607.4 365 80.3
Atru.chr13.384 Acer truncatum HOM05D004143 ORTHO05D004816 3.7e-170 602.1 385 78.2
Zm00001eb418750 Zea mays HOM05D004143 ORTHO05D004816 5.4e-169 598.2 451 64.3
Atru.chr5.814 Acer truncatum HOM05D004143 ORTHO05D004816 4.5e-168 595.1 390 75.4
Duzib128G1652 Durio zibethinus HOM05D004143 ORTHO05D004816 2.5e-166 589.3 372 77.4
MD01G1230600 Malus domestica HOM05D004143 ORTHO05D004816 2.2e-154 549.7 390 71.3
Potri.012G011000 Populus trichocarpa HOM05D004143 ORTHO05D004816 1.6e-152 543.5 449 63.7
SEGI_21716 Sequoiadendron giganteum HOM05D004143 ORTHO05D004816 2.0e-147 526.6 423 62.2
Gohir.D11G107400 Gossypium hirsutum HOM05D004143 ORTHO05D004816 1.1e-145 520.8 455 62.0
SMO340G0156 Selaginella moellendorffii HOM05D004143 ORTHO05D004816 9.5e-142 507.7 418 60.8
SEGI_05818 Sequoiadendron giganteum HOM05D004143 ORTHO05D004816 1.2e-141 507.3 432 58.6
COL.COLO4_23082 Corchorus olitorius HOM05D004143 ORTHO05D004816 1.1e-134 484.2 450 56.7
SMO239G0122 Selaginella moellendorffii HOM05D004143 ORTHO05D004816 2.0e-131 473.4 434 54.6
unitig_578.g16681 Utricularia gibba HOM05D004143 ORTHO05D004816 1.3e-130 470.7 300 74.3
Os04g0105400 Oryza sativa ssp. japonica HOM05D004143 ORTHO05D004816 6.7e-119 431.8 321 66.0
Cc02_g00640 Coffea canephora HOM05D004143 ORTHO05D004816 6.2e-117 425.2 236 85.2
Mapoly0086s0058 Marchantia polymorpha HOM05D004143 ORTHO05D004816 2.2e-114 416.8 447 49.9
Pp3c23_3660 Physcomitrium patens HOM05D004143 ORTHO05D004816 3.5e-104 382.9 426 45.8
TPR.G29284 Trifolium pratense HOM05D004143 ORTHO05D004816 2.3e-103 380.2 232 80.2
SEGI_06275 Sequoiadendron giganteum HOM05D004143 ORTHO05D004816 4.3e-102 375.9 270 66.3
CDE02G4135 Ceratophyllum demersum HOM05D004143 ORTHO05D004816 1.7e-98 364.0 427 47.1
AagrBONN_evm.TU.Sc2ySwM_344.1928 Anthoceros agrestis HOM05D004143 ORTHO05D004816 1.4e-92 344.4 388 45.6
MBI04_g09827_MAGBIO Magnolia biondii HOM05D004143 ORTHO05D004816 7.7e-75 285.4 269 60.2
Cpa.g.c30701.1 Carica papaya HOM05D004143 ORTHO05D004816 5.5e-73 279.3 164 82.9
Cc02_g00650 Coffea canephora HOM05D004143 ORTHO05D004816 2.0e-62 244.2 167 72.5
SEGI_07746 Sequoiadendron giganteum HOM05D004143 ORTHO05D004816 2.6e-46 190.7 113 79.6
Solyc03g080020.4 Solanum lycopersicum HOM05D004143 ORTHO05D004816 6.4e-45 186.0 444 32.0
SEGI_40229 Sequoiadendron giganteum HOM05D004143 ORTHO05D004816 3.3e-41 173.7 93 87.1
Actinidia28288 Actinidia chinensis HOM05D004143 ORTHO05D004816 4.3e-41 173.3 127 66.1
Peaxi162Scf01026g00266 Petunia axillaris HOM05D004143 ORTHO05D004816 1.2e-38 165.2 446 30.5
GSVIVG01027551001 Vitis vinifera HOM05D000016 ORTHO05D000109 1.6e-24 118.2 77 75.3
VMungo1383G1334 Vigna mungo HOM05D004143 ORTHO05D432805 6.8e-23 112.8 84 63.1
TPR.G22104 Trifolium pratense HOM05D004143 ORTHO05D004816 1.6e-16 91.7 61 70.5
unitig_578.g16680 Utricularia gibba HOM05D004143 ORTHO05D004816 1.5e-14 85.1 79 58.2
Hma1.2p1_0105F.1_g050690 Hydrangea macrophylla HOM05D004298 ORTHO05D004816 6.9e-07 59.7 43 65.1
Hma1.2p1_1050F.1_g251950 Hydrangea macrophylla HOM05D004298 ORTHO05D004816 1.5e-06 58.5 43 62.8
Mapoly0174s0006 Marchantia polymorpha HOM05D001886 ORTHO05D005666 7.6e-06 56.2 107 27.1


User provided reference genes

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