Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu017333.1 Olea europaea HOM05D007523 ORTHO05D009520 2.9e-80 302.0 169 100.0
GSVIVG01026296001 Vitis vinifera HOM05D007523 ORTHO05D009520 1.9e-39 166.4 174 62.6
MSTRG.1775 Avicennia marina HOM05D007523 ORTHO05D009520 1.2e-38 163.7 168 62.5
Dinv28021 Davidia involucrata HOM05D007523 ORTHO05D009520 6.1e-38 161.4 146 71.9
vmacro00070 Vaccinium macrocarpon HOM05D007523 ORTHO05D009520 3.0e-37 159.1 174 54.6
Potri.001G132400 Populus trichocarpa HOM05D007523 ORTHO05D009520 8.9e-37 157.5 175 58.3
CSS0001694 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 2.0e-36 156.4 175 59.4
CSS0003197 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 4.4e-36 155.2 175 58.9
Migut.E01344 Erythranthe guttata HOM05D007523 ORTHO05D009520 9.8e-36 154.1 160 61.2
Haze_08076 Corylus avellana HOM05D007523 ORTHO05D009520 1.3e-35 153.7 173 61.3
SGA_v2.0_scaffold96G29060 Striga asiatica HOM05D007523 ORTHO05D009520 2.4e-34 149.4 172 54.7
Migut.A00547 Erythranthe guttata HOM05D007523 ORTHO05D009520 5.4e-34 148.3 183 53.0
Sabra01G0102200 Salix brachista HOM05D007523 ORTHO05D009520 7.0e-34 147.9 174 55.7
Ciclev10002679m.g Citrus clementina HOM05D007523 ORTHO05D009520 9.2e-34 147.5 176 56.2
Manes.17G008000 Manihot esculenta HOM05D007523 ORTHO05D009520 1.2e-33 147.1 173 57.2
Cc08_g04400 Coffea canephora HOM05D007523 ORTHO05D009520 2.7e-33 146.0 173 50.3
QL12p000900 Quercus lobata HOM05D007523 ORTHO05D009520 3.5e-33 145.6 175 55.4
CiPaw.11G102500 Carya illinoinensis HOM05D007523 ORTHO05D009520 4.5e-33 145.2 133 68.4
Atru.chr6.1496 Acer truncatum HOM05D007523 ORTHO05D009520 7.8e-33 144.4 173 59.5
TAR629G3055 Trochodendron aralioides HOM05D007523 ORTHO05D009520 1.0e-32 144.1 133 68.4
Thecc.02G365300 Theobroma cacao HOM05D007523 ORTHO05D009520 1.3e-32 143.7 167 58.1
Rhsim11G0026000 Rhododendron simsii HOM05D007523 ORTHO05D009520 1.1e-31 140.6 150 58.7
SalBow8G2402 Salvia bowleyana HOM05D007523 ORTHO05D009520 1.5e-31 140.2 165 58.8
Duzib248G0934 Durio zibethinus HOM05D007523 ORTHO05D009520 1.0e-29 134.0 165 57.0
Nn1g02124 Nelumbo nucifera HOM05D007523 ORTHO05D009520 1.4e-29 133.7 134 64.9
Peaxi162Scf00876g00434 Petunia axillaris HOM05D007523 ORTHO05D009520 2.3e-29 132.9 133 64.7
Prupe.5G021500 Prunus persica HOM05D007523 ORTHO05D009520 4.0e-29 132.1 172 55.2
CANSAT21G1314 Cannabis sativa HOM05D007523 ORTHO05D009520 6.8e-29 131.3 156 59.6
CARHR225970 Cardamine hirsuta HOM05D007523 ORTHO05D009520 8.9e-29 131.0 148 60.1
MD06G1014600 Malus domestica HOM05D007523 ORTHO05D009520 1.5e-28 130.2 175 52.0
Lalb_Chr16g0392051 Lupinus albus HOM05D007523 ORTHO05D009520 3.4e-28 129.0 173 52.6
TWI34G1559 Tripterygium wilfordii HOM05D007523 ORTHO05D009520 4.4e-28 128.6 162 56.8
ClCG07G002350 Citrullus lanatus HOM05D007523 ORTHO05D009520 5.8e-28 128.3 151 58.3
HanXRQChr03g0082201 Helianthus annuus HOM05D007523 ORTHO05D009520 2.2e-27 126.3 125 69.6
THA.LOC104811020 Tarenaya hassleriana HOM05D007523 ORTHO05D009520 2.9e-27 125.9 136 63.2
Lj4g0001215 Lotus japonicus HOM05D007523 ORTHO05D009520 8.3e-27 124.4 133 61.7
Nn3g19239 Nelumbo nucifera HOM05D007523 ORTHO05D009520 1.1e-26 124.0 131 61.8
BcaNung03083 Brassica carinata HOM05D007523 ORTHO05D009520 1.9e-26 123.2 146 59.6
A03p51710 Brassica napus HOM05D000137 ORTHO05D002305 1.9e-26 123.2 146 59.6
RcHm_v2.0_Chr7g0213271 Rosa chinensis HOM05D007523 ORTHO05D009520 1.9e-26 123.2 171 52.6
BraA03t14258Z Brassica rapa HOM05D000452 ORTHO05D000647 2.4e-26 122.9 146 59.6
CsaV3_3G030330 Cucumis sativus L. HOM05D007523 ORTHO05D009520 2.4e-26 122.9 149 57.0
BolC7t45523H Brassica oleracea HOM05D007523 ORTHO05D009520 3.2e-26 122.5 146 59.6
Thhalv10026426m.g Eutrema salsugineum HOM05D007523 ORTHO05D009520 3.2e-26 122.5 133 64.7
unitig_0.g2217 Utricularia gibba HOM05D007523 ORTHO05D009520 3.2e-26 122.5 165 53.9
FvH4_5g23880 Fragaria vesca HOM05D007523 ORTHO05D009520 4.1e-26 122.1 171 52.6
FAN18G0623 Fragaria x ananassa HOM05D007523 ORTHO05D009520 4.1e-26 122.1 171 52.6
FAN18G3486 Fragaria x ananassa HOM05D007523 ORTHO05D009520 4.1e-26 122.1 171 52.6
ATR1098G100 Amborella trichopoda HOM05D007523 ORTHO05D009520 9.2e-26 120.9 117 67.5
C07p50210 Brassica napus HOM05D000137 ORTHO05D002305 9.2e-26 120.9 145 60.0
Actinidia04633 Actinidia chinensis HOM05D007523 ORTHO05D009520 1.6e-25 120.2 175 48.0
Carub.0007s2207 Capsella rubella HOM05D007523 ORTHO05D009520 1.6e-25 120.2 133 63.9
ECA240G1522 Erigeron canadensis HOM05D007523 ORTHO05D009520 1.6e-25 120.2 152 57.9
AT4G19070 Arabidopsis thaliana HOM05D007523 ORTHO05D009520 2.0e-25 119.8 133 63.2
FAN04G1224 Fragaria x ananassa HOM05D007523 ORTHO05D009520 2.7e-25 119.4 154 55.8
Sc22g0001970 Simmondsia chinensis HOM05D007523 ORTHO05D009520 2.7e-25 119.4 149 56.4
AL7G35030 Arabidopsis lyrata HOM05D007523 ORTHO05D009520 3.5e-25 119.0 133 63.9
Gohir.A12G173966 Gossypium hirsutum HOM05D007523 ORTHO05D009520 3.5e-25 119.0 168 54.8
Medtr8g071180 Medicago truncatula HOM05D007523 ORTHO05D009520 3.5e-25 119.0 133 60.9
PSO675G0835 Papaver somniferum HOM05D007523 ORTHO05D009520 3.5e-25 119.0 141 61.7
Sp7g17790 Schrenkiella parvula HOM05D007523 ORTHO05D005023 3.5e-25 119.0 133 63.2
Aa31LG6G1770 Aethionema arabicum HOM05D007523 ORTHO05D005023 6.0e-25 118.2 148 56.1
Gorai.008G189000 Gossypium raimondii HOM05D007523 ORTHO05D009520 7.8e-25 117.9 168 53.6
PSO675G0851 Papaver somniferum HOM05D007523 ORTHO05D009520 7.8e-25 117.9 139 62.6
BcaC06g30615 Brassica carinata HOM05D007523 ORTHO05D009520 1.7e-24 116.7 147 59.2
arahy.Tifrunner.gnm1.ann1.19GUIE Arachis hypogaea HOM05D007523 ORTHO05D009520 2.3e-24 116.3 138 59.4
arahy.Tifrunner.gnm1.ann1.7DC73F Arachis hypogaea HOM05D007523 ORTHO05D009520 3.0e-24 115.9 138 58.7
Gohir.D12G176600 Gossypium hirsutum HOM05D007523 ORTHO05D009520 3.9e-24 115.5 170 51.8
CDE05G0732 Ceratophyllum demersum HOM05D007523 ORTHO05D009520 5.0e-24 115.2 126 65.9
TPR.G31317 Trifolium pratense HOM05D007523 ORTHO05D009520 5.0e-24 115.2 133 60.2
Aqoxy4G00046 Aquilegia oxysepala HOM05D007523 ORTHO05D009520 1.9e-23 113.2 131 60.3
Sed0002333 Sechium edule HOM05D007523 ORTHO05D009520 1.9e-23 113.2 158 53.2
Eucgr.D02602 Eucalyptus grandis HOM05D007523 ORTHO05D009520 2.5e-23 112.8 134 60.4
Cpa.g.sc355.1 Carica papaya HOM05D007523 ORTHO05D009520 4.3e-23 112.1 110 70.9
PGR031G0795 Punica granatum HOM05D007523 ORTHO05D009520 4.3e-23 112.1 134 59.7
PGSC0003DMG400029292 Solanum tuberosum HOM05D007523 ORTHO05D009520 4.3e-23 112.1 166 50.0
Nitab4.5_0006741g0030 Nicotiana tabacum HOM05D007523 ORTHO05D009520 5.6e-23 111.7 133 57.9
CAN.G947.41 Capsicum annuum HOM05D007523 ORTHO05D009520 7.3e-23 111.3 133 57.1
Ca_22486_v3 Cicer arietinum L. HOM05D007523 ORTHO05D009520 1.6e-22 110.2 132 59.8
Solyc12g096090.2 Solanum lycopersicum HOM05D007523 ORTHO05D009520 2.8e-22 109.4 152 54.6
Sopen12g031980 Solanum pennellii HOM05D007523 ORTHO05D009520 2.8e-22 109.4 152 54.6
Nitab4.5_0000943g0130 Nicotiana tabacum HOM05D007523 ORTHO05D009520 3.6e-22 109.0 152 51.3
SalBow4G0950 Salvia bowleyana HOM05D007523 ORTHO05D009520 6.2e-22 108.2 163 50.3
Peaxi162Scf00972g00043 Petunia axillaris HOM05D007523 ORTHO05D009520 2.3e-21 106.3 98 68.4
Phvul.003G279400 Phaseolus vulgaris HOM05D007523 ORTHO05D009520 4.0e-21 105.5 82 80.5
Psat4g110520 Pisum sativum HOM05D007523 ORTHO05D009520 4.0e-21 105.5 133 57.9
VMungo0251G0133 Vigna mungo HOM05D007523 ORTHO05D009520 1.5e-20 103.6 140 55.0
EL10Ac5g11951 Beta vulgaris HOM05D007523 ORTHO05D009520 7.5e-20 101.3 134 59.0
MBI18_g28211_MAGBIO Magnolia biondii HOM05D007523 ORTHO05D009520 9.8e-20 100.9 131 56.5
Glyma.16G104300 Glycine max HOM05D007523 ORTHO05D009520 1.7e-19 100.1 82 76.8
COL.COLO4_11248 Corchorus olitorius HOM05D007523 ORTHO05D009520 2.2e-19 99.8 123 50.4
Ah.12g055890 Amaranthus hybridus HOM05D002287 ORTHO05D002588 2.9e-19 99.4 133 56.4
Mapoly0024s0063 Marchantia polymorpha HOM05D007523 ORTHO05D009520 1.4e-18 97.1 121 53.7
AagrBONN_evm.TU.Sc2ySwM_368.2556 Anthoceros agrestis HOM05D007523 ORTHO05D009520 4.1e-18 95.5 120 50.0
AUR62027336 Chenopodium quinoa HOM05D007523 ORTHO05D009520 1.2e-17 94.0 92 71.7
MSTRG.11889 Avicennia marina HOM05D007523 ORTHO05D009520 2.7e-17 92.8 165 47.3
HPP92_012195 Vanilla planifolia HOM05D007523 ORTHO05D009520 2.7e-17 92.8 107 64.5
AUR62007395 Chenopodium quinoa HOM05D002287 ORTHO05D009520 3.5e-17 92.4 85 74.1
Pp3c19_7810 Physcomitrium patens HOM05D007523 ORTHO05D009520 1.9e-15 86.7 147 45.6
Os07g0143600 Oryza sativa ssp. japonica HOM05D007523 ORTHO05D009520 2.5e-15 86.3 79 75.9
SMO353G0121 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 2.5e-15 86.3 136 48.5
Mapoly0010s0014 Marchantia polymorpha HOM05D007523 ORTHO05D009520 6.2e-14 81.6 93 62.4
SMO364G0280 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 8.1e-14 81.3 78 71.8


User provided reference genes

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