Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu017325.1 Olea europaea HOM05D004691 ORTHO05D005552 7.7e-67 256.9 122 100.0
Dinv34779 Davidia involucrata HOM05D004691 ORTHO05D005552 2.9e-53 211.8 108 93.5
CANSAT25G2296 Cannabis sativa HOM05D004691 ORTHO05D005552 8.3e-53 210.3 108 91.7
Hma1.2p1_0667F.1_g199750 Hydrangea macrophylla HOM05D004691 ORTHO05D005552 8.3e-53 210.3 108 92.6
Lj2A1168T23 Lonicera japonica HOM05D004691 ORTHO05D005552 1.1e-52 209.9 108 93.5
CSS0029439 Camellia sinensis var. sinensis HOM05D004691 ORTHO05D005552 1.4e-52 209.5 108 93.5
Dinv32905 Davidia involucrata HOM05D004691 ORTHO05D005552 3.2e-52 208.4 108 92.6
Lj9A529T34 Lonicera japonica HOM05D004691 ORTHO05D005552 3.2e-52 208.4 108 92.6
CANSAT80G0426 Cannabis sativa HOM05D004691 ORTHO05D005552 4.1e-52 208.0 108 90.7
Cc08_g05170 Coffea canephora HOM05D004691 ORTHO05D005552 4.1e-52 208.0 108 90.7
Thecc.01G274400 Theobroma cacao HOM05D004691 ORTHO05D005552 5.4e-52 207.6 108 91.7
unitig_748.g8144 Utricularia gibba HOM05D004691 ORTHO05D005552 5.4e-52 207.6 108 89.8
CiPaw.08G107800 Carya illinoinensis HOM05D004691 ORTHO05D005552 1.2e-51 206.5 108 91.7
Glyma.17G206800 Glycine max HOM05D004691 ORTHO05D005552 1.2e-51 206.5 108 88.9
Gohir.D12G003600 Gossypium hirsutum HOM05D004691 ORTHO05D005552 1.2e-51 206.5 108 90.7
Gorai.008G003400 Gossypium raimondii HOM05D004691 ORTHO05D005552 1.2e-51 206.5 108 90.7
PGR119G1056 Punica granatum HOM05D004691 ORTHO05D005552 1.2e-51 206.5 108 90.7
PGR119G1812 Punica granatum HOM05D004691 ORTHO05D005552 1.2e-51 206.5 108 90.7
VMungo0647G0910 Vigna mungo HOM05D004691 ORTHO05D005552 1.6e-51 206.1 108 90.7
SGA_v2.0_scaffold96G29067 Striga asiatica HOM05D004691 ORTHO05D005552 2.0e-51 205.7 108 88.9
HanXRQChr01g0009931 Helianthus annuus HOM05D004691 ORTHO05D005552 2.7e-51 205.3 108 89.8
Cpa.g.sc52.60 Carica papaya HOM05D004691 ORTHO05D005552 3.5e-51 204.9 108 90.7
Cfa006171 Carpinus fangiana HOM05D004691 ORTHO05D005552 3.5e-51 204.9 108 89.8
Ca_01504_v3 Cicer arietinum L. HOM05D004691 ORTHO05D005552 3.5e-51 204.9 108 88.9
ClCG07G000390 Citrullus lanatus HOM05D004691 ORTHO05D005552 3.5e-51 204.9 108 88.9
Lalb_Chr06g0162871 Lupinus albus HOM05D004691 ORTHO05D005552 3.5e-51 204.9 108 90.7
Sc17g0001280 Simmondsia chinensis HOM05D004691 ORTHO05D005552 3.5e-51 204.9 108 89.8
TAR260G0003 Trochodendron aralioides HOM05D004691 ORTHO05D005552 3.5e-51 204.9 108 88.9
MELO3C014296.2 Cucumis melo HOM05D004691 ORTHO05D005552 4.6e-51 204.5 108 88.9
Duzib138G0407 Durio zibethinus HOM05D004691 ORTHO05D005552 7.8e-51 203.8 108 89.8
PSO675G3171 Papaver somniferum HOM05D004691 ORTHO05D005552 7.8e-51 203.8 108 88.9
Ciclev10022626m.g Citrus clementina HOM05D004691 ORTHO05D005552 1.0e-50 203.4 108 88.9
Glyma.07G180400 Glycine max HOM05D004691 ORTHO05D005552 1.0e-50 203.4 108 88.9
Medtr1g047130 Medicago truncatula HOM05D004691 ORTHO05D005552 1.0e-50 203.4 108 88.0
Lj3A731T61 Lonicera japonica HOM05D004691 ORTHO05D005552 1.3e-50 203.0 108 88.0
Manes.05G079200 Manihot esculenta HOM05D004691 ORTHO05D005552 1.3e-50 203.0 108 88.0
EL10Ac4g08388 Beta vulgaris HOM05D004691 ORTHO05D005552 1.7e-50 202.6 108 88.9
COL.COLO4_11872 Corchorus olitorius HOM05D004691 ORTHO05D005552 1.7e-50 202.6 108 89.8
Phvul.001G054100 Phaseolus vulgaris HOM05D004691 ORTHO05D005552 1.7e-50 202.6 108 88.9
Rhsim13G0027100 Rhododendron simsii HOM05D004691 ORTHO05D005552 1.7e-50 202.6 108 88.9
PSO017G2306 Papaver somniferum HOM05D004691 ORTHO05D005552 2.3e-50 202.2 108 88.0
Phvul.001G053600 Phaseolus vulgaris HOM05D004691 ORTHO05D005552 2.3e-50 202.2 108 88.0
PSO761G0020 Papaver somniferum HOM05D004691 ORTHO05D005552 3.0e-50 201.8 108 88.9
Solyc08g075850.3 Solanum lycopersicum HOM05D004691 ORTHO05D005552 3.0e-50 201.8 108 88.9
Sopen08g024490 Solanum pennellii HOM05D004691 ORTHO05D005552 3.0e-50 201.8 108 88.9
PGSC0003DMG400030873 Solanum tuberosum HOM05D004691 ORTHO05D005552 3.0e-50 201.8 108 88.9
TPR.G11285 Trifolium pratense HOM05D004691 ORTHO05D005552 3.0e-50 201.8 108 87.0
TWI18G0899 Tripterygium wilfordii HOM05D004691 ORTHO05D005552 3.0e-50 201.8 108 86.1
Haze_24303 Corylus avellana HOM05D004691 ORTHO05D005552 3.9e-50 201.4 108 88.9
CsaV3_2G013570 Cucumis sativus L. HOM05D004691 ORTHO05D005552 3.9e-50 201.4 108 86.1
ECA248G3453 Erigeron canadensis HOM05D004691 ORTHO05D005552 3.9e-50 201.4 108 88.0
FvH4_2g23200 Fragaria vesca HOM05D004691 ORTHO05D005552 3.9e-50 201.4 108 88.0
DCAR_018435 Daucus carota HOM05D004691 ORTHO05D005552 5.0e-50 201.1 108 88.9
HanXRQChr08g0213401 Helianthus annuus HOM05D004691 ORTHO05D005552 5.0e-50 201.1 108 87.0
Potri.004G062600 Populus trichocarpa HOM05D004691 ORTHO05D005552 5.0e-50 201.1 108 88.0
RcHm_v2.0_Chr6g0290451 Rosa chinensis HOM05D004691 ORTHO05D005552 5.0e-50 201.1 108 87.0
FAN24G2920 Fragaria x ananassa HOM05D004691 ORTHO05D005552 6.6e-50 200.7 108 87.0
MD03G1261300 Malus domestica HOM05D004691 ORTHO05D005552 8.6e-50 200.3 108 88.0
TWI75G0960 Tripterygium wilfordii HOM05D004691 ORTHO05D005552 8.6e-50 200.3 114 85.1
Migut.A00557 Erythranthe guttata HOM05D004691 ORTHO05D005552 1.1e-49 199.9 108 86.1
Nitab4.5_0000108g0400 Nicotiana tabacum HOM05D004691 ORTHO05D005552 1.1e-49 199.9 108 88.0
Hund12255 Selenicereus undatus HOM05D004691 ORTHO05D005552 1.1e-49 199.9 108 87.0
MD11G1281700 Malus domestica HOM05D004691 ORTHO05D005552 1.5e-49 199.5 108 88.0
Prupe.1G577100 Prunus persica HOM05D004691 ORTHO05D005552 1.5e-49 199.5 108 88.0
vmacro02596 Vaccinium macrocarpon HOM05D004691 ORTHO05D005552 1.5e-49 199.5 108 88.9
arahy.Tifrunner.gnm1.ann1.DJ1VY2 Arachis hypogaea HOM05D004691 ORTHO05D005552 1.9e-49 199.1 108 88.0
DCAR_002717 Daucus carota HOM05D004691 ORTHO05D005552 1.9e-49 199.1 108 88.9
FAN27G3192 Fragaria x ananassa HOM05D004691 ORTHO05D005552 1.9e-49 199.1 108 87.0
Gorai.007G138900 Gossypium raimondii HOM05D004691 ORTHO05D005552 1.9e-49 199.1 108 87.0
arahy.Tifrunner.gnm1.ann1.3Q9Y1V Arachis hypogaea HOM05D004691 ORTHO05D005552 2.5e-49 198.7 108 88.0
arahy.Tifrunner.gnm1.ann1.GXX04Y Arachis hypogaea HOM05D004691 ORTHO05D005552 2.5e-49 198.7 108 88.0
Sed0017796 Sechium edule HOM05D004691 ORTHO05D005552 2.5e-49 198.7 108 88.9
TPR.G13465 Trifolium pratense HOM05D004691 ORTHO05D005552 2.5e-49 198.7 108 87.0
CDE04G1639 Ceratophyllum demersum HOM05D004691 ORTHO05D005552 3.3e-49 198.4 108 88.0
Eucgr.K03344 Eucalyptus grandis HOM05D004691 ORTHO05D005552 3.3e-49 198.4 108 86.1
Peaxi162Scf00408g00833 Petunia axillaris HOM05D004691 ORTHO05D005552 3.3e-49 198.4 108 87.0
PGSC0003DMG400017984 Solanum tuberosum HOM05D004691 ORTHO05D005552 3.3e-49 198.4 108 88.0
AUR62038661 Chenopodium quinoa HOM05D004691 ORTHO05D005552 4.3e-49 198.0 108 87.0
Lj1g0022890 Lotus japonicus HOM05D004691 ORTHO05D005552 5.6e-49 197.6 108 85.2
Prupe.8G237600 Prunus persica HOM05D004691 ORTHO05D005552 5.6e-49 197.6 108 87.0
ATR0787G203 Amborella trichopoda HOM05D004691 ORTHO05D005552 7.3e-49 197.2 108 87.0
Aqoxy5G00433 Aquilegia oxysepala HOM05D004691 ORTHO05D005552 7.3e-49 197.2 108 87.0
Lsat_1_v5_gn_9_49380 Lactuca sativa HOM05D004691 ORTHO05D005552 7.3e-49 197.2 108 86.1
arahy.Tifrunner.gnm1.ann1.2S5JQC Arachis hypogaea HOM05D004691 ORTHO05D005552 1.2e-48 196.4 108 87.0
GSVIVG01001184001 Vitis vinifera HOM05D004691 ORTHO05D005552 1.6e-48 196.1 108 87.0
PSO210G7297 Papaver somniferum HOM05D004691 ORTHO05D005552 2.8e-48 195.3 108 86.1
Gohir.D11G129800 Gossypium hirsutum HOM05D004691 ORTHO05D005552 3.6e-48 194.9 108 85.2
Nitab4.5_0003992g0020 Nicotiana tabacum HOM05D004691 ORTHO05D005552 3.6e-48 194.9 108 86.1
RcHm_v2.0_Chr1g0329861 Rosa chinensis HOM05D004691 ORTHO05D005552 8.0e-48 193.7 108 85.2
Sabra04G0041500 Salix brachista HOM05D004691 ORTHO05D005552 8.0e-48 193.7 108 86.1
SalBow4G0422 Salvia bowleyana HOM05D004691 ORTHO05D005552 1.1e-47 193.4 116 80.2
Ah.10g032130 Amaranthus hybridus HOM05D004691 ORTHO05D005552 1.4e-47 193.0 130 73.8
Thhalv10005052m.g Eutrema salsugineum HOM05D004691 ORTHO05D005552 1.8e-47 192.6 108 83.3
Aa31LG11G2940 Aethionema arabicum HOM05D004691 ORTHO05D005552 2.3e-47 192.2 108 83.3
THA.LOC104823041 Tarenaya hassleriana HOM05D004691 ORTHO05D005552 5.2e-47 191.0 108 84.3
BcaB04g19862 Brassica carinata HOM05D004691 ORTHO05D005552 1.5e-46 189.5 108 81.5
BcaC04g23501 Brassica carinata HOM05D004691 ORTHO05D005552 1.5e-46 189.5 108 81.5
A06p34500 Brassica napus HOM05D004691 ORTHO05D005552 1.5e-46 189.5 108 81.5
A09p06900 Brassica napus HOM05D004691 ORTHO05D005552 1.5e-46 189.5 108 81.5
C07p44050 Brassica napus HOM05D004691 ORTHO05D005552 1.5e-46 189.5 108 81.5
C09p07630 Brassica napus HOM05D004691 ORTHO05D005552 1.5e-46 189.5 108 81.5
BolC7t44929H Brassica oleracea HOM05D004691 ORTHO05D005552 1.5e-46 189.5 108 81.5
BolC9t53681H Brassica oleracea HOM05D004691 ORTHO05D005552 1.5e-46 189.5 108 81.5
BraA06t26378Z Brassica rapa HOM05D004691 ORTHO05D005552 1.5e-46 189.5 108 81.5
BraA09t36337Z Brassica rapa HOM05D004691 ORTHO05D005552 1.5e-46 189.5 108 81.5
EL10Ac4g08386 Beta vulgaris HOM05D004691 ORTHO05D005552 2.0e-46 189.1 134 71.6
Sed0022085 Sechium edule HOM05D004691 ORTHO05D005552 2.0e-46 189.1 134 71.6
AL6G34810 Arabidopsis lyrata HOM05D004691 ORTHO05D005552 5.8e-46 187.6 108 80.6
AT5G23535 Arabidopsis thaliana HOM05D004691 ORTHO05D005552 5.8e-46 187.6 108 80.6
RcHm_v2.0_Chr1g0329981 Rosa chinensis HOM05D004691 ORTHO05D005552 5.8e-46 187.6 101 87.1
Sp2g23660 Schrenkiella parvula HOM05D004691 ORTHO05D005552 5.8e-46 187.6 108 80.6
CARHR189990 Cardamine hirsuta HOM05D004691 ORTHO05D005552 1.3e-45 186.4 108 79.6
SGA_v2.0_scaffold89G27398 Striga asiatica HOM05D004691 ORTHO05D005552 1.3e-45 186.4 110 81.8
EL10Ac2g03130 Beta vulgaris HOM05D004691 ORTHO05D005552 1.7e-45 186.0 134 70.9
Os11g0139100 Oryza sativa ssp. japonica HOM05D004691 ORTHO05D005552 1.7e-45 186.0 108 78.7
AL4G15050 Arabidopsis lyrata HOM05D004691 ORTHO05D005552 2.9e-45 185.3 108 79.6
Carub.0006s2131 Capsella rubella HOM05D004691 ORTHO05D005552 2.9e-45 185.3 108 79.6
AUR62018176 Chenopodium quinoa HOM05D004691 ORTHO05D005552 2.9e-45 185.3 119 77.3
Zm00001eb196350 Zea mays HOM05D004691 ORTHO05D005552 1.4e-44 183.0 108 77.8
Os12g0135900 Oryza sativa ssp. japonica HOM05D004691 ORTHO05D005552 1.9e-44 182.6 108 77.8
Lsat_1_v5_gn_5_187201 Lactuca sativa HOM05D004691 ORTHO05D005552 3.5e-43 178.3 101 84.2
SEGI_08900 Sequoiadendron giganteum HOM05D004691 ORTHO05D005552 6.0e-43 177.6 108 76.9
Glyma.02G145800 Glycine max HOM05D004691 ORTHO05D005552 7.8e-43 177.2 108 79.6
Hma1.2p1_0525F.1_g172750 Hydrangea macrophylla HOM05D004691 ORTHO05D005552 8.6e-42 173.7 178 56.2
Lj5g0022765 Lotus japonicus HOM05D004691 ORTHO05D005552 1.9e-41 172.6 108 76.9
Nn1g02379 Nelumbo nucifera HOM05D004691 ORTHO05D005552 7.6e-38 160.6 81 92.6
FAN20G3100 Fragaria x ananassa HOM05D004691 ORTHO05D005552 3.7e-37 158.3 108 75.0
QL02p011400 Quercus lobata HOM05D004691 ORTHO05D005552 6.4e-37 157.5 80 92.5
HPP92_004579 Vanilla planifolia HOM05D004691 ORTHO05D005552 4.1e-36 154.8 102 74.5
CAN.G1427.9 Capsicum annuum HOM05D004691 ORTHO05D005552 1.2e-35 153.3 80 91.2
Actinidia00785 Actinidia chinensis HOM05D004691 ORTHO05D005552 1.6e-35 152.9 107 72.0
Nitab4.5_0002485g0080 Nicotiana tabacum HOM05D004691 ORTHO05D005552 3.9e-34 148.3 108 68.5
Psat6g047600 Pisum sativum HOM05D004691 ORTHO05D005552 1.1e-31 140.2 107 68.2
Pp3c2_11670 Physcomitrium patens HOM05D004691 ORTHO05D005552 6.8e-31 137.5 108 63.0
SalBow8G2642 Salvia bowleyana HOM05D004691 ORTHO05D005552 1.3e-29 133.3 80 81.2
AagrBONN_evm.TU.Sc2ySwM_117.3924 Anthoceros agrestis HOM05D004691 ORTHO05D005552 6.6e-26 120.9 79 73.4
Mapoly0064s0052 Marchantia polymorpha HOM05D004691 ORTHO05D005552 5.3e-23 111.3 103 54.4
Oeu046808.1 Olea europaea HOM05D004691 ORTHO05D005552 1.2e-22 110.2 84 76.2
Duzib133G0007 Durio zibethinus HOM05D004691 ORTHO05D005552 1.4e-20 103.2 55 87.3
MCO13G165 Micromonas commoda HOM05D004691 ORTHO05D005552 1.9e-20 102.8 96 50.0
SMO347G0488 Selaginella moellendorffii HOM05D004691 ORTHO05D005552 4.0e-15 85.1 105 44.8
CBR_g54238 Chara braunii HOM05D004691 ORTHO05D005552 2.4e-12 75.9 66 59.1
Gohir.A12G003900 Gossypium hirsutum HOM05D004691 ORTHO05D005552 4.2e-12 75.1 35 97.1
TAR362G0310 Trochodendron aralioides HOM05D004691 ORTHO05D005552 9.3e-12 73.9 35 94.3
Cre07.g330450 Chlamydomonas reinhardtii HOM05D004691 ORTHO05D005552 2.1e-11 72.8 108 39.8
RcHm_v2.0_Chr7g0235701 Rosa chinensis HOM05D004691 ORTHO05D005552 2.1e-11 72.8 43 72.1
Thecc.01G231900 Theobroma cacao HOM05D004691 ORTHO05D005552 6.9e-07 57.8 33 78.8
CSS0006769 Camellia sinensis var. sinensis HOM05D004691 ORTHO05D005552 5.8e-06 54.7 27 85.2


User provided reference genes

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