Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu017297.1 Olea europaea HOM05D005920 ORTHO05D007211 8.3e-82 307.0 156 100.0
Cc10_g11840 Coffea canephora HOM05D005920 ORTHO05D007211 2.6e-43 179.1 156 66.0
Actinidia29463 Actinidia chinensis HOM05D005920 ORTHO05D007211 8.4e-42 174.1 160 61.9
vmacro00831 Vaccinium macrocarpon HOM05D005920 ORTHO05D007211 2.1e-40 169.5 158 58.9
MSTRG.1445 Avicennia marina HOM05D005920 ORTHO05D007211 3.9e-39 165.2 153 60.8
Nitab4.5_0001273g0050 Nicotiana tabacum HOM05D005920 ORTHO05D007211 6.7e-39 164.5 167 58.7
CSS0035403 Camellia sinensis var. sinensis HOM05D005920 ORTHO05D007211 2.5e-38 162.5 168 56.5
Nitab4.5_0001803g0120 Nicotiana tabacum HOM05D005920 ORTHO05D007211 1.3e-37 160.2 161 59.0
Haze_00449 Corylus avellana HOM05D005920 ORTHO05D007211 1.8e-36 156.4 166 56.6
Solyc11g012900.3 Solanum lycopersicum HOM05D005920 ORTHO05D007211 2.4e-36 156.0 163 54.0
Prupe.1G499100 Prunus persica HOM05D005920 ORTHO05D007211 9.0e-36 154.1 166 56.6
CANSAT25G3381 Cannabis sativa HOM05D005920 ORTHO05D007211 4.5e-35 151.8 163 54.0
MD15G1349900 Malus domestica HOM05D005920 ORTHO05D007211 4.5e-35 151.8 164 54.9
Peaxi162Scf00914g00016 Petunia axillaris HOM05D005920 ORTHO05D007211 2.2e-34 149.4 156 55.8
Thecc.08G124700 Theobroma cacao HOM05D005920 ORTHO05D007211 2.2e-34 149.4 161 55.9
TAR376G1095 Trochodendron aralioides HOM05D005920 ORTHO05D007211 6.5e-34 147.9 151 57.6
RhsimUnG0093000 Rhododendron simsii HOM05D005920 ORTHO05D007211 7.2e-33 144.4 160 55.0
Ciclev10001211m.g Citrus clementina HOM05D005920 ORTHO05D007211 1.2e-32 143.7 163 54.6
SalBow7G4584 Salvia bowleyana HOM05D000555 ORTHO05D007211 1.2e-32 143.7 162 53.1
Glyma.14G149300 Glycine max HOM05D005920 ORTHO05D007211 1.4e-31 140.2 163 56.4
Glyma.13G080100 Glycine max HOM05D005920 ORTHO05D007211 3.0e-31 139.0 163 54.6
Duzib116G0551 Durio zibethinus HOM05D005920 ORTHO05D007211 8.8e-31 137.5 159 55.3
Sopen11g007640 Solanum pennellii HOM05D005920 ORTHO05D007211 2.0e-30 136.3 165 50.3
RcHm_v2.0_Chr6g0295691 Rosa chinensis HOM05D005920 ORTHO05D007211 2.5e-30 136.0 171 50.9
TWI56G1135 Tripterygium wilfordii HOM05D005920 ORTHO05D007211 4.3e-30 135.2 158 53.8
CAN.G127.17 Capsicum annuum HOM05D005920 ORTHO05D007211 5.7e-30 134.8 165 50.3
Gohir.A05G234800 Gossypium hirsutum HOM05D005920 ORTHO05D007211 7.4e-30 134.4 158 51.9
DCAR_014089 Daucus carota HOM05D005920 ORTHO05D007211 1.3e-29 133.7 167 52.1
CiPaw.06G030600 Carya illinoinensis HOM05D005920 ORTHO05D007211 2.2e-29 132.9 161 52.2
ClCG11G015770 Citrullus lanatus HOM05D005920 ORTHO05D007211 2.2e-29 132.9 160 49.4
Manes.18G076800 Manihot esculenta HOM05D005920 ORTHO05D007211 2.8e-29 132.5 154 52.6
Nn1g08786 Nelumbo nucifera HOM05D005920 ORTHO05D007211 2.8e-29 132.5 162 48.8
Atru.chr13.1453_Atru.chr13.1454 Acer truncatum HOM05D005920 ORTHO05D007211 6.3e-29 131.3 159 54.1
Atru.chr13.1476_Atru.chr13.1477 Acer truncatum HOM05D005920 ORTHO05D007211 6.3e-29 131.3 159 54.1
Gohir.D06G045101 Gossypium hirsutum HOM05D005920 ORTHO05D007211 1.4e-28 130.2 163 49.1
Gorai.009G245500 Gossypium raimondii HOM05D005920 ORTHO05D007211 1.4e-28 130.2 160 50.6
Lj4A625G10 Lonicera japonica HOM05D005920 ORTHO05D007211 1.4e-28 130.2 180 49.4
Duzib093G1431 Durio zibethinus HOM05D005920 ORTHO05D007211 1.8e-28 129.8 166 50.6
Gohir.D05G237100 Gossypium hirsutum HOM05D005920 ORTHO05D007211 2.4e-28 129.4 160 51.9
Gohir.A06G044132 Gossypium hirsutum HOM05D005920 ORTHO05D007211 3.1e-28 129.0 164 49.4
Gorai.010G050100 Gossypium raimondii HOM05D005920 ORTHO05D007211 4.1e-28 128.6 164 48.8
Cpa.g.sc64.83 Carica papaya HOM05D005920 ORTHO05D007211 9.1e-28 127.5 161 48.4
FvH4_2g26840 Fragaria vesca HOM05D005920 ORTHO05D007211 1.5e-27 126.7 163 49.1
FAN24G1536 Fragaria x ananassa HOM05D005920 ORTHO05D007211 1.5e-27 126.7 163 49.1
Psat6g041000 Pisum sativum HOM05D005920 ORTHO05D007211 3.4e-27 125.6 153 51.6
Medtr1g030300 Medicago truncatula HOM05D005920 ORTHO05D007211 4.5e-27 125.2 152 53.3
Sabra05G0133900 Salix brachista HOM05D005920 ORTHO05D007211 4.5e-27 125.2 160 49.4
TPR.G25796 Trifolium pratense HOM05D005920 ORTHO05D007211 4.5e-27 125.2 159 49.7
QL09p034927 Quercus lobata HOM05D005920 ORTHO05D007211 1.7e-26 123.2 160 50.0
arahy.Tifrunner.gnm1.ann1.GZGN8Y Arachis hypogaea HOM05D005920 ORTHO05D007211 3.8e-26 122.1 162 50.6
Hma1.2p1_0186F.1_g081770 Hydrangea macrophylla HOM05D005920 ORTHO05D007211 5.5e-25 118.2 161 49.7
Hma1.2p1_0186F.1_g081780 Hydrangea macrophylla HOM05D005920 ORTHO05D007211 5.5e-25 118.2 161 49.7
Actinidia03473 Actinidia chinensis HOM05D005920 ORTHO05D007211 1.6e-24 116.7 149 51.0
Thhalv10028662m.g Eutrema salsugineum HOM05D005920 ORTHO05D007211 1.0e-23 114.0 154 48.7
FAN27G1284 Fragaria x ananassa HOM05D005920 ORTHO05D007211 1.8e-23 113.2 163 45.4
Carub.0006s2688 Capsella rubella HOM05D005920 ORTHO05D007211 5.1e-23 111.7 165 47.3
Lj1g0027048 Lotus japonicus HOM05D005920 ORTHO05D007211 1.1e-22 110.5 164 45.7
Eucgr.F03788 Eucalyptus grandis HOM05D005920 ORTHO05D007211 3.3e-22 109.0 205 40.5
Lsat_1_v5_gn_6_112921 Lactuca sativa HOM05D005920 ORTHO05D007211 4.4e-22 108.6 160 50.0
THA.LOC104817311 Tarenaya hassleriana HOM05D005920 ORTHO05D007211 7.4e-22 107.8 137 50.4
AT4G08320 Arabidopsis thaliana HOM05D005920 ORTHO05D007211 6.3e-21 104.8 167 44.9
AL6G42090 Arabidopsis lyrata HOM05D005920 ORTHO05D007211 1.1e-20 104.0 163 46.6
COL.COLO4_35924 Corchorus olitorius HOM05D005920 ORTHO05D007211 1.4e-20 103.6 158 43.7
A02p26870 Brassica napus HOM05D005920 ORTHO05D007211 2.4e-20 102.8 160 45.0
C02p42670 Brassica napus HOM05D005920 ORTHO05D007211 2.4e-20 102.8 160 45.0
BolSC33t60638H Brassica oleracea HOM05D005920 ORTHO05D007211 2.4e-20 102.8 160 45.0
BraA02t07698Z Brassica rapa HOM05D005920 ORTHO05D007211 2.4e-20 102.8 160 45.0
Potri.005G177400 Populus trichocarpa HOM05D005920 ORTHO05D007211 3.1e-20 102.4 174 43.1
FAN20G1415 Fragaria x ananassa HOM05D005920 ORTHO05D007211 7.0e-20 101.3 163 44.2
Migut.C01133 Erythranthe guttata HOM05D005920 ORTHO05D007211 1.2e-19 100.5 153 48.4
CARHR259410 Cardamine hirsuta HOM05D005920 ORTHO05D007211 2.6e-19 99.4 155 45.8
BcaB05g23941 Brassica carinata HOM05D005920 ORTHO05D007211 3.5e-19 99.0 151 47.0
Sp6g09620 Schrenkiella parvula HOM05D005920 ORTHO05D007211 5.9e-19 98.2 153 43.1
BcaC03g16447 Brassica carinata HOM05D005920 ORTHO05D007211 7.7e-19 97.8 160 45.6
VMungo0647G0482 Vigna mungo HOM05D005920 ORTHO05D007211 5.0e-18 95.1 161 44.7
Aqoxy6G00210 Aquilegia oxysepala HOM05D005920 ORTHO05D007211 8.5e-18 94.4 165 41.2
ATR0584G080 Amborella trichopoda HOM05D005920 ORTHO05D007211 1.4e-17 93.6 160 43.8
CDE07G1786 Ceratophyllum demersum HOM05D005920 ORTHO05D007211 9.4e-17 90.9 138 46.4
CDE09G0226 Ceratophyllum demersum HOM05D005920 ORTHO05D007211 9.4e-17 90.9 137 46.0
SGA_v2.0_scaffold24G10464 Striga asiatica HOM05D005920 ORTHO05D007211 6.1e-16 88.2 144 45.1
Aa31LG9G14240 Aethionema arabicum HOM05D005920 ORTHO05D007211 1.4e-15 87.0 166 44.0
EL10Ac1g01005 Beta vulgaris HOM05D005920 ORTHO05D007211 2.0e-14 83.2 240 30.4
SEGI_11742 Sequoiadendron giganteum HOM05D005920 ORTHO05D007211 2.6e-14 82.8 162 39.5
MELO3C010480.2 Cucumis melo HOM05D005920 ORTHO05D007211 1.3e-13 80.5 171 35.7
AUR62014341 Chenopodium quinoa HOM05D005920 ORTHO05D007211 1.8e-12 76.6 91 50.5
AUR62019083 Chenopodium quinoa HOM05D005920 ORTHO05D007211 2.4e-12 76.3 91 49.5
PSO528G0030 Papaver somniferum HOM05D005920 ORTHO05D007211 5.3e-12 75.1 166 36.7
Sc02g0006060 Simmondsia chinensis HOM05D005920 ORTHO05D007211 1.9e-09 66.6 118 42.4
unitig_749.g13933 Utricularia gibba HOM05D005920 ORTHO05D007211 5.5e-09 65.1 154 38.3
HanXRQChr05g0151131 Helianthus annuus HOM05D005920 ORTHO05D007211 3.0e-07 59.3 148 36.5
Hund26813 Selenicereus undatus HOM05D005920 ORTHO05D007211 3.0e-07 59.3 233 27.9
FvH4_2g26830 Fragaria vesca HOM05D005920 ORTHO05D007211 2.0e-06 56.6 113 36.3
FAN24G0658 Fragaria x ananassa HOM05D005920 ORTHO05D007211 4.4e-06 55.5 113 35.4


User provided reference genes

Program Settings