Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu017295.1 Olea europaea HOM05D005920 ORTHO05D007211 2.9e-123 445.3 227 100.0
SalBow7G4584 Salvia bowleyana HOM05D000555 ORTHO05D007211 7.1e-66 254.6 215 64.2
MSTRG.1445 Avicennia marina HOM05D005920 ORTHO05D007211 3.5e-65 252.3 210 64.8
Migut.C01133 Erythranthe guttata HOM05D005920 ORTHO05D007211 1.6e-62 243.4 211 62.1
Nitab4.5_0001273g0050 Nicotiana tabacum HOM05D005920 ORTHO05D007211 3.7e-62 242.3 225 58.7
CAN.G127.17 Capsicum annuum HOM05D005920 ORTHO05D007211 6.9e-61 238.0 212 60.4
Actinidia29463 Actinidia chinensis HOM05D005920 ORTHO05D007211 1.2e-60 237.3 224 59.4
Solyc11g012900.3 Solanum lycopersicum HOM05D005920 ORTHO05D007211 2.2e-59 233.0 212 61.3
Cc10_g11840 Coffea canephora HOM05D005920 ORTHO05D007211 2.9e-59 232.6 225 59.6
Sopen11g007640 Solanum pennellii HOM05D005920 ORTHO05D007211 5.0e-59 231.9 212 60.4
QL09p034934 Quercus lobata HOM05D005920 ORTHO05D007211 9.4e-58 227.6 222 56.3
Dinv07224 Davidia involucrata HOM05D005920 ORTHO05D007211 1.2e-57 227.3 227 56.8
vmacro00831 Vaccinium macrocarpon HOM05D005920 ORTHO05D007211 7.9e-57 224.6 241 53.1
Hma1.2p1_0186F.1_g081770 Hydrangea macrophylla HOM05D005920 ORTHO05D007211 1.0e-56 224.2 226 58.4
DCAR_014089 Daucus carota HOM05D005920 ORTHO05D007211 2.0e-55 219.9 210 57.6
Gohir.A05G234800 Gossypium hirsutum HOM05D005920 ORTHO05D007211 1.7e-54 216.9 218 55.0
Gohir.D05G237100 Gossypium hirsutum HOM05D005920 ORTHO05D007211 2.2e-54 216.5 218 55.0
Gorai.010G050100 Gossypium raimondii HOM05D005920 ORTHO05D007211 2.2e-54 216.5 224 54.0
Gorai.009G245500 Gossypium raimondii HOM05D005920 ORTHO05D007211 3.7e-54 215.7 218 54.6
Atru.chr13.1453_Atru.chr13.1454 Acer truncatum HOM05D005920 ORTHO05D007211 1.1e-53 214.2 220 54.1
Atru.chr13.1476_Atru.chr13.1477 Acer truncatum HOM05D005920 ORTHO05D007211 1.1e-53 214.2 220 54.1
CANSAT25G3381 Cannabis sativa HOM05D005920 ORTHO05D007211 1.1e-53 214.2 226 51.3
CiPaw.06G030600 Carya illinoinensis HOM05D005920 ORTHO05D007211 1.1e-53 214.2 219 53.4
Ciclev10001211m.g Citrus clementina HOM05D005920 ORTHO05D007211 4.1e-53 212.2 218 52.8
Duzib093G1431 Durio zibethinus HOM05D005920 ORTHO05D007211 4.1e-53 212.2 224 54.0
Nitab4.5_0001803g0120 Nicotiana tabacum HOM05D005920 ORTHO05D007211 5.3e-53 211.8 186 59.7
Thecc.08G124700 Theobroma cacao HOM05D005920 ORTHO05D007211 5.3e-53 211.8 224 54.0
Potri.005G177400 Populus trichocarpa HOM05D005920 ORTHO05D007211 1.2e-52 210.7 209 54.5
Lsat_1_v5_gn_6_112921 Lactuca sativa HOM05D005920 ORTHO05D007211 4.5e-52 208.8 233 52.4
AL6G42090 Arabidopsis lyrata HOM05D005920 ORTHO05D007211 8.5e-51 204.5 228 53.1
CARHR259410 Cardamine hirsuta HOM05D005920 ORTHO05D007211 1.9e-50 203.4 230 51.3
unitig_749.g13933 Utricularia gibba HOM05D005920 ORTHO05D007211 2.5e-50 203.0 210 54.8
EL10Ac1g01005 Beta vulgaris HOM05D005920 ORTHO05D007211 7.2e-50 201.4 222 54.5
Nn1g08784 Nelumbo nucifera HOM05D005920 ORTHO05D007211 7.2e-50 201.4 225 52.4
THA.LOC104817311 Tarenaya hassleriana HOM05D005920 ORTHO05D007211 7.2e-50 201.4 225 54.7
AT4G08320 Arabidopsis thaliana HOM05D005920 ORTHO05D007211 2.7e-49 199.5 228 51.8
Aqoxy6G00210 Aquilegia oxysepala HOM05D005920 ORTHO05D007211 6.1e-49 198.4 215 53.0
Prupe.1G499100 Prunus persica HOM05D005920 ORTHO05D007211 6.1e-49 198.4 220 52.3
HanXRQChr05g0151131 Helianthus annuus HOM05D005920 ORTHO05D007211 7.9e-49 198.0 203 56.7
Sp6g09620 Schrenkiella parvula HOM05D005920 ORTHO05D007211 1.0e-48 197.6 231 49.8
MELO3C010480.2 Cucumis melo HOM05D005920 ORTHO05D007211 5.1e-48 195.3 223 50.7
Eucgr.F03788 Eucalyptus grandis HOM05D005920 ORTHO05D007211 5.1e-48 195.3 225 51.1
Carub.0006s2688 Capsella rubella HOM05D005920 ORTHO05D007211 1.1e-47 194.1 233 48.5
Manes.18G076800 Manihot esculenta HOM05D005920 ORTHO05D007211 1.5e-47 193.7 223 50.7
Sed0014256 Sechium edule HOM05D005920 ORTHO05D007211 2.0e-47 193.4 224 50.0
AUR62019083 Chenopodium quinoa HOM05D005920 ORTHO05D007211 3.3e-47 192.6 220 50.5
BcaC03g16447 Brassica carinata HOM05D005920 ORTHO05D007211 4.4e-47 192.2 214 48.6
C02p42670 Brassica napus HOM05D005920 ORTHO05D007211 4.4e-47 192.2 214 48.6
A02p26870 Brassica napus HOM05D005920 ORTHO05D007211 5.7e-47 191.8 214 49.5
BraA02t07698Z Brassica rapa HOM05D005920 ORTHO05D007211 5.7e-47 191.8 214 49.5
CsaV3_4G028230 Cucumis sativus L. HOM05D005920 ORTHO05D007211 5.7e-47 191.8 223 50.2
Sc02g0006050 Simmondsia chinensis HOM05D005920 ORTHO05D007211 5.7e-47 191.8 220 49.1
Aa31LG9G14240 Aethionema arabicum HOM05D005920 ORTHO05D007211 7.4e-47 191.4 244 51.2
BolSC33t60638H Brassica oleracea HOM05D005920 ORTHO05D007211 7.4e-47 191.4 214 48.6
ECA246G2944 Erigeron canadensis HOM05D005920 ORTHO05D007211 7.4e-47 191.4 214 53.3
Thhalv10028662m.g Eutrema salsugineum HOM05D005920 ORTHO05D007211 7.4e-47 191.4 234 49.1
BcaB05g23941 Brassica carinata HOM05D005920 ORTHO05D007211 1.3e-46 190.7 218 49.1
Hund26813 Selenicereus undatus HOM05D005920 ORTHO05D007211 1.7e-46 190.3 219 48.4
SGA_v2.0_scaffold24G10464 Striga asiatica HOM05D005920 ORTHO05D007211 2.2e-46 189.9 212 53.8
TWI56G1135 Tripterygium wilfordii HOM05D005920 ORTHO05D007211 4.8e-46 188.7 227 48.5
RcHm_v2.0_Chr6g0295691 Rosa chinensis HOM05D005920 ORTHO05D007211 1.1e-45 187.6 223 48.4
TAR376G1095 Trochodendron aralioides HOM05D005920 ORTHO05D007211 2.4e-45 186.4 228 50.4
MD15G1349900 Malus domestica HOM05D005920 ORTHO05D007211 1.5e-44 183.7 221 51.1
FvH4_2g26840 Fragaria vesca HOM05D005920 ORTHO05D007211 2.6e-44 183.0 223 46.6
ATR0584G080 Amborella trichopoda HOM05D005920 ORTHO05D007211 3.5e-44 182.6 227 50.2
COL.COLO4_35924 Corchorus olitorius HOM05D005920 ORTHO05D007211 4.5e-44 182.2 218 49.1
FAN20G1415 Fragaria x ananassa HOM05D005920 ORTHO05D007211 4.5e-44 182.2 224 47.3
Lj1g0027048 Lotus japonicus HOM05D005920 ORTHO05D007211 7.7e-44 181.4 231 48.1
FAN27G1284 Fragaria x ananassa HOM05D005920 ORTHO05D007211 1.0e-43 181.0 225 46.2
Psat6g041000 Pisum sativum HOM05D005920 ORTHO05D007211 1.0e-43 181.0 219 49.3
FAN24G1536 Fragaria x ananassa HOM05D005920 ORTHO05D007211 1.3e-43 180.6 224 46.4
arahy.Tifrunner.gnm1.ann1.GZGN8Y Arachis hypogaea HOM05D005920 ORTHO05D007211 3.8e-43 179.1 225 47.6
Actinidia03473 Actinidia chinensis HOM05D005920 ORTHO05D007211 6.5e-43 178.3 205 52.7
AUR62014341 Chenopodium quinoa HOM05D005920 ORTHO05D007211 6.5e-43 178.3 238 46.2
VMungo0647G0482 Vigna mungo HOM05D005920 ORTHO05D007211 6.5e-43 178.3 223 49.3
Glyma.14G149300 Glycine max HOM05D005920 ORTHO05D007211 1.9e-42 176.8 222 50.5
Glyma.13G080100 Glycine max HOM05D005920 ORTHO05D007211 2.5e-42 176.4 226 49.6
Medtr1g030300 Medicago truncatula HOM05D005920 ORTHO05D007211 5.5e-42 175.3 224 46.9
Phvul.008G163200 Phaseolus vulgaris HOM05D005920 ORTHO05D007211 3.6e-41 172.6 218 47.2
ClCG11G015770 Citrullus lanatus HOM05D005920 ORTHO05D007211 6.1e-41 171.8 272 40.1
TPR.G25796 Trifolium pratense HOM05D005920 ORTHO05D007211 1.4e-40 170.6 214 48.6
PSO528G0030 Papaver somniferum HOM05D005920 ORTHO05D007211 4.0e-40 169.1 228 46.1
Lalb_Chr10g0101741 Lupinus albus HOM05D005920 ORTHO05D007211 6.7e-40 168.3 240 44.2
Sabra05G0133900 Salix brachista HOM05D005920 ORTHO05D007211 1.5e-39 167.2 181 50.3
RhsimUnG0093000 Rhododendron simsii HOM05D005920 ORTHO05D007211 1.1e-37 161.0 99 78.8
Lj4A625G10 Lonicera japonica HOM05D005920 ORTHO05D007211 1.4e-37 160.6 99 76.8
CDE09G0226 Ceratophyllum demersum HOM05D005920 ORTHO05D007211 3.5e-36 156.0 221 43.9
Os04g0690300 Oryza sativa ssp. japonica HOM05D005920 ORTHO05D007211 1.1e-34 151.0 216 43.5
Duzib116G0551 Durio zibethinus HOM05D005920 ORTHO05D007211 1.5e-34 150.6 99 68.7
HPP92_011946 Vanilla planifolia HOM05D005920 ORTHO05D007211 9.4e-34 147.9 217 40.1
Zm00001eb076340 Zea mays HOM05D005920 ORTHO05D007211 1.6e-33 147.1 216 41.2
FAN24G0658 Fragaria x ananassa HOM05D005920 ORTHO05D007211 1.1e-29 134.4 205 42.9
SEGI_11742 Sequoiadendron giganteum HOM05D005920 ORTHO05D007211 1.8e-29 133.7 227 40.1
Gohir.A06G044066 Gossypium hirsutum HOM05D005920 ORTHO05D007211 1.7e-27 127.1 167 48.5
Gohir.D06G045000 Gossypium hirsutum HOM05D005920 ORTHO05D007211 1.1e-26 124.4 163 48.5
PGR042G0443 Punica granatum HOM05D005920 ORTHO05D007211 7.2e-26 121.7 223 37.2
Haze_00449 Corylus avellana HOM05D005920 ORTHO05D007211 4.7e-25 119.0 79 67.1
PGR042G3885 Punica granatum HOM05D005920 ORTHO05D007211 7.5e-23 111.7 203 36.9
Mapoly0102s0012 Marchantia polymorpha HOM05D005920 ORTHO05D007211 2.8e-22 109.8 214 36.0
FAN20G3053 Fragaria x ananassa HOM05D005920 ORTHO05D007211 1.6e-17 94.0 202 37.1
Lj4g0027975 Lotus japonicus HOM05D005920 ORTHO05D007211 1.6e-17 94.0 199 34.7
Hma1.2p1_0186F.1_g081780 Hydrangea macrophylla HOM05D005920 ORTHO05D007211 2.1e-17 93.6 56 82.1
Peaxi162Scf00914g00016 Petunia axillaris HOM05D005920 ORTHO05D007211 1.8e-16 90.5 55 80.0
AagrBONN_evm.TU.Sc2ySwM_344.2076 Anthoceros agrestis HOM05D009220 ORTHO05D012167 2.3e-16 90.1 220 32.3
CSS0035403 Camellia sinensis var. sinensis HOM05D005920 ORTHO05D007211 3.0e-16 89.7 55 78.2
arahy.Tifrunner.gnm1.ann1.QU4SLQ Arachis hypogaea HOM05D005920 ORTHO05D007211 4.4e-15 85.9 68 63.2
Gohir.D06G045101 Gossypium hirsutum HOM05D005920 ORTHO05D007211 3.7e-14 82.8 54 66.7
Zm00001eb389760 Zea mays HOM05D005920 ORTHO05D007211 1.4e-13 80.9 159 34.6
Nn1g08776 Nelumbo nucifera HOM05D005920 ORTHO05D007211 1.8e-13 80.5 103 45.6
CSS0013202 Camellia sinensis var. sinensis HOM05D005920 ORTHO05D007211 5.6e-10 68.9 82 50.0
Cpa.g.sc64.83 Carica papaya HOM05D005920 ORTHO05D007211 9.5e-10 68.2 36 83.3
FvH4_2g26830 Fragaria vesca HOM05D005920 ORTHO05D007211 6.2e-09 65.5 58 60.3
CBR_g88565 Chara braunii HOM05D005920 ORTHO05D007211 3.1e-08 63.2 247 26.3
PGR142G1024 Punica granatum HOM05D005920 ORTHO05D007211 1.5e-07 60.8 102 38.2
Zm00001eb112230 Zea mays HOM05D001435 ORTHO05D007211 2.6e-07 60.1 65 44.6
Lalb_Chr20g0123481 Lupinus albus HOM05D005920 ORTHO05D007211 9.8e-07 58.2 199 26.1
Lj4A625G9 Lonicera japonica HOM05D005920 ORTHO05D007211 2.2e-06 57.0 83 45.8


User provided reference genes

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