Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu017232.1 Olea europaea HOM05D005755 ORTHO05D007006 6.6e-57 223.8 111 100.0
Oeu057236.1 Olea europaea HOM05D005755 ORTHO05D007006 1.9e-51 205.7 111 89.2
SGA_v2.0_scaffold122G33246 Striga asiatica HOM05D005940 ORTHO05D007027 4.0e-46 188.0 109 82.6
MSTRG.8164 Avicennia marina HOM05D005755 ORTHO05D007006 9.3e-43 176.8 109 78.9
SGA_v2.0_scaffold71G24037 Striga asiatica HOM05D005755 ORTHO05D007006 3.0e-41 171.8 112 74.1
SalBow3G2244 Salvia bowleyana HOM05D005755 ORTHO05D007006 9.6e-40 166.8 111 73.0
SalBow3G3619 Salvia bowleyana HOM05D005755 ORTHO05D007006 9.6e-40 166.8 111 73.0
SalBow1G5334 Salvia bowleyana HOM05D005755 ORTHO05D007006 1.3e-39 166.4 111 73.0
SalBow1G7067 Salvia bowleyana HOM05D005755 ORTHO05D007006 1.3e-39 166.4 111 73.0
Migut.F01798 Erythranthe guttata HOM05D005755 ORTHO05D007006 9.9e-37 156.8 102 72.5
Atru.chr12.636 Acer truncatum HOM05D005755 ORTHO05D007006 5.4e-35 151.0 101 72.3
Cc00_g19060 Coffea canephora HOM05D005755 ORTHO05D007006 7.1e-35 150.6 116 68.1
vmacro04890 Vaccinium macrocarpon HOM05D005755 ORTHO05D007006 2.1e-34 149.1 113 68.1
Nn5g30302 Nelumbo nucifera HOM05D005755 ORTHO05D007006 3.5e-34 148.3 99 75.8
Sopen04g020610 Solanum pennellii HOM05D005755 ORTHO05D007006 3.5e-34 148.3 115 66.1
Peaxi162Scf00373g00210 Petunia axillaris HOM05D005755 ORTHO05D007006 7.9e-34 147.1 114 68.4
Solyc04g049970.4 Solanum lycopersicum HOM05D005755 ORTHO05D007006 1.8e-33 146.0 112 66.1
Thecc.10G068000 Theobroma cacao HOM05D005755 ORTHO05D007006 2.3e-33 145.6 99 71.7
Ciclev10033129m.g Citrus clementina HOM05D005755 ORTHO05D007006 3.0e-33 145.2 99 71.7
Dinv04676 Davidia involucrata HOM05D005755 ORTHO05D007006 3.0e-33 145.2 110 69.1
Peaxi162Scf00111g00718 Petunia axillaris HOM05D005755 ORTHO05D007006 3.0e-33 145.2 101 71.3
Sp6g14210 Schrenkiella parvula HOM05D005755 ORTHO05D007006 3.0e-33 145.2 96 72.9
Manes.10G042600 Manihot esculenta HOM05D005755 ORTHO05D007006 5.1e-33 144.4 100 72.0
CSS0044562 Camellia sinensis var. sinensis HOM05D005755 ORTHO05D007006 6.7e-33 144.1 115 67.8
Hma1.2p1_0157F.1_g068960 Hydrangea macrophylla HOM05D005755 ORTHO05D007006 8.7e-33 143.7 95 73.7
Cpa.g.sc53.20 Carica papaya HOM05D005755 ORTHO05D007006 1.1e-32 143.3 98 74.5
DCAR_015273 Daucus carota HOM05D005755 ORTHO05D007006 1.5e-32 142.9 99 69.7
Nitab4.5_0000061g0170 Nicotiana tabacum HOM05D005755 ORTHO05D007006 1.5e-32 142.9 118 63.6
PGSC0003DMG400022164 Solanum tuberosum HOM05D005755 ORTHO05D007006 1.5e-32 142.9 116 62.9
AT5G51960 Arabidopsis thaliana HOM05D005755 ORTHO05D007006 2.5e-32 142.1 95 73.7
A10p09750 Brassica napus HOM05D005755 ORTHO05D007006 2.5e-32 142.1 95 73.7
CAN.G79.77 Capsicum annuum HOM05D005755 ORTHO05D007006 2.5e-32 142.1 105 66.7
Dinv11808 Davidia involucrata HOM05D005755 ORTHO05D007006 2.5e-32 142.1 110 66.4
Duzib114G0063 Durio zibethinus HOM05D005755 ORTHO05D007006 2.5e-32 142.1 99 70.7
Solyc07g065720.4 Solanum lycopersicum HOM05D005755 ORTHO05D007006 2.5e-32 142.1 115 64.3
BcaB08g35550 Brassica carinata HOM05D005755 ORTHO05D007006 3.3e-32 141.7 95 72.6
TAR381G1573 Trochodendron aralioides HOM05D005755 ORTHO05D007006 3.3e-32 141.7 99 70.7
CARHR264900 Cardamine hirsuta HOM05D005755 ORTHO05D007006 4.3e-32 141.4 95 71.6
Duzib106G1131 Durio zibethinus HOM05D005755 ORTHO05D007006 4.3e-32 141.4 99 70.7
ECA238G0308 Erigeron canadensis HOM05D005755 ORTHO05D007006 4.3e-32 141.4 101 70.3
Sopen07g033930 Solanum pennellii HOM05D005755 ORTHO05D007006 4.3e-32 141.4 116 62.9
THA.LOC104799357 Tarenaya hassleriana HOM05D005755 ORTHO05D007006 4.3e-32 141.4 99 67.7
Thhalv10015092m.g Eutrema salsugineum HOM05D005755 ORTHO05D007006 5.6e-32 141.0 95 72.6
Aa31LG7G12880 Aethionema arabicum HOM05D005755 ORTHO05D007006 7.4e-32 140.6 102 69.6
BraA10t43055Z Brassica rapa HOM05D005755 ORTHO05D007006 7.4e-32 140.6 95 72.6
Nitab4.5_0001721g0080 Nicotiana tabacum HOM05D005755 ORTHO05D007006 7.4e-32 140.6 117 65.0
TWI15G0398 Tripterygium wilfordii HOM05D005755 ORTHO05D007006 7.4e-32 140.6 102 68.6
BcaC03g14561 Brassica carinata HOM05D005755 ORTHO05D007006 9.6e-32 140.2 95 71.6
C02p20090 Brassica napus HOM05D005755 ORTHO05D007006 9.6e-32 140.2 95 71.6
BcaC04g20616 Brassica carinata HOM05D005755 ORTHO05D007006 1.3e-31 139.8 95 72.6
C09p41470 Brassica napus HOM05D005755 ORTHO05D007006 1.3e-31 139.8 95 72.6
BolC2t08139H Brassica oleracea HOM05D005755 ORTHO05D007006 1.3e-31 139.8 95 71.6
BolC9t57024H Brassica oleracea HOM05D005755 ORTHO05D007006 1.3e-31 139.8 95 72.6
Carub.0008s1205 Capsella rubella HOM05D005755 ORTHO05D007006 1.3e-31 139.8 97 69.1
Glyma.05G164400 Glycine max HOM05D005755 ORTHO05D007006 1.3e-31 139.8 99 71.7
Oeu057237.1 Olea europaea HOM05D005755 ORTHO05D007006 1.6e-31 139.4 75 85.3
Actinidia38859 Actinidia chinensis HOM05D005755 ORTHO05D007006 2.1e-31 139.0 95 73.7
Lsat_1_v5_gn_2_46180 Lactuca sativa HOM05D005755 ORTHO05D007006 2.1e-31 139.0 96 70.8
BraA02t06267Z Brassica rapa HOM05D005755 ORTHO05D007006 2.8e-31 138.7 99 68.7
Glyma.08G121800 Glycine max HOM05D005755 ORTHO05D007006 2.8e-31 138.7 99 69.7
Prupe.2G218600 Prunus persica HOM05D005755 ORTHO05D007006 2.8e-31 138.7 99 67.7
AL8G26290 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 3.7e-31 138.3 97 71.1
Gohir.A01G133200 Gossypium hirsutum HOM05D005755 ORTHO05D007006 3.7e-31 138.3 99 68.7
Sc05g0001890 Simmondsia chinensis HOM05D005755 ORTHO05D007006 3.7e-31 138.3 99 68.7
GSVIVG01016339001 Vitis vinifera HOM05D005755 ORTHO05D007006 3.7e-31 138.3 99 70.7
AUR62037483 Chenopodium quinoa HOM05D005755 ORTHO05D007006 4.8e-31 137.9 101 68.3
TPR.G12499 Trifolium pratense HOM05D005755 ORTHO05D007006 4.8e-31 137.9 101 67.3
Gorai.002G143500 Gossypium raimondii HOM05D005755 ORTHO05D007006 6.2e-31 137.5 99 67.7
MD07G1179300 Malus domestica HOM05D005755 ORTHO05D007006 8.1e-31 137.1 99 69.7
Ca_19066_v3 Cicer arietinum L. HOM05D005755 ORTHO05D007006 1.1e-30 136.7 112 64.3
AL8G32330 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 1.8e-30 136.0 95 70.5
QL08p056843 Quercus lobata HOM05D005755 ORTHO05D007006 1.8e-30 136.0 99 66.7
unitig_8.g3685 Utricularia gibba HOM05D005755 ORTHO05D007006 2.4e-30 135.6 101 70.3
EL10Ac6g13227 Beta vulgaris HOM05D005755 ORTHO05D007006 4.0e-30 134.8 101 66.3
CiPaw.15G145100 Carya illinoinensis HOM05D005755 ORTHO05D007006 4.0e-30 134.8 99 68.7
AUR62004768 Chenopodium quinoa HOM05D005755 ORTHO05D007006 4.0e-30 134.8 101 66.3
CsaV3_3G030820 Cucumis sativus L. HOM05D005755 ORTHO05D007006 4.0e-30 134.8 99 68.7
FvH4_7g20160 Fragaria vesca HOM05D005755 ORTHO05D007006 4.0e-30 134.8 98 70.4
FAN10G3796 Fragaria x ananassa HOM05D005755 ORTHO05D007006 4.0e-30 134.8 98 70.4
EL10Ac7g15953 Beta vulgaris HOM05D005755 ORTHO05D007006 5.3e-30 134.4 101 66.3
FAN06G3582 Fragaria x ananassa HOM05D005755 ORTHO05D007006 5.3e-30 134.4 98 69.4
Medtr6g068850 Medicago truncatula HOM05D005755 ORTHO05D007006 5.3e-30 134.4 112 61.6
Rhsim09G0154200 Rhododendron simsii HOM05D001639 ORTHO05D004140 5.3e-30 134.4 138 55.8
EL10Ac7g17935 Beta vulgaris HOM05D005755 ORTHO05D007006 9.0e-30 133.7 102 64.7
Potri.008G044200 Populus trichocarpa HOM05D005755 ORTHO05D007006 9.0e-30 133.7 99 68.7
Sabra08G0030600 Salix brachista HOM05D005755 ORTHO05D007006 9.0e-30 133.7 101 68.3
Hund18453 Selenicereus undatus HOM05D005755 ORTHO05D007006 9.0e-30 133.7 99 66.7
Phvul.002G244400 Phaseolus vulgaris HOM05D005755 ORTHO05D007006 1.2e-29 133.3 99 65.7
EL10Ac3g06003 Beta vulgaris HOM05D005755 ORTHO05D007006 1.5e-29 132.9 101 65.3
Potri.010G217300 Populus trichocarpa HOM05D005755 ORTHO05D007006 1.5e-29 132.9 101 68.3
HPP92_016041 Vanilla planifolia HOM05D005755 ORTHO05D007006 1.5e-29 132.9 99 69.7
Eucgr.G02800 Eucalyptus grandis HOM05D005755 ORTHO05D007006 2.0e-29 132.5 99 64.6
MBI19_g25006_MAGBIO Magnolia biondii HOM05D005755 ORTHO05D007006 2.0e-29 132.5 98 69.4
BcaB05g23952 Brassica carinata HOM05D005755 ORTHO05D007006 2.6e-29 132.1 95 67.4
TWI38G1562 Tripterygium wilfordii HOM05D005755 ORTHO05D007006 2.6e-29 132.1 101 66.3
CANSAT11G0923 Cannabis sativa HOM05D005755 ORTHO05D007006 4.5e-29 131.3 99 66.7
Lalb_Chr07g0186081 Lupinus albus HOM05D005755 ORTHO05D007006 4.5e-29 131.3 101 66.3
RcHm_v2.0_Chr1g0364121 Rosa chinensis HOM05D005755 ORTHO05D007006 5.8e-29 131.0 99 67.7
Aqoxy3G01116 Aquilegia oxysepala HOM05D005755 ORTHO05D007006 7.6e-29 130.6 98 67.3
FAN01G0677 Fragaria x ananassa HOM05D005755 ORTHO05D007006 7.6e-29 130.6 98 68.4
Psat1g119080 Pisum sativum HOM05D005755 ORTHO05D007006 9.9e-29 130.2 101 63.4
Sed0018161 Sechium edule HOM05D005755 ORTHO05D007006 9.9e-29 130.2 99 64.6
MD01G1131200 Malus domestica HOM05D005755 ORTHO05D007006 1.3e-28 129.8 99 65.7
Ah.04g160050 Amaranthus hybridus HOM05D005755 ORTHO05D007006 1.7e-28 129.4 97 68.0
arahy.Tifrunner.gnm1.ann1.FL0JYU Arachis hypogaea HOM05D005755 ORTHO05D007006 2.2e-28 129.0 101 65.3
arahy.Tifrunner.gnm1.ann1.QA5RE0 Arachis hypogaea HOM05D005755 ORTHO05D007006 2.2e-28 129.0 101 65.3
PGR142G0594 Punica granatum HOM05D005755 ORTHO05D007006 2.2e-28 129.0 98 64.3
FAN03G2322 Fragaria x ananassa HOM05D005755 ORTHO05D007006 3.8e-28 128.3 95 69.5
Lj4g0006534 Lotus japonicus HOM05D005755 ORTHO05D007006 3.8e-28 128.3 99 63.6
CDE10G1261 Ceratophyllum demersum HOM05D005755 ORTHO05D007006 1.1e-27 126.7 99 64.6
Gohir.D01G118000 Gossypium hirsutum HOM05D005755 ORTHO05D007006 1.4e-27 126.3 117 57.3
PSO675G6920 Papaver somniferum HOM05D005755 ORTHO05D007006 1.4e-27 126.3 101 63.4
Cfa019629 Carpinus fangiana HOM05D005755 ORTHO05D007006 1.9e-27 125.9 100 64.0
VMungo0251G2378 Vigna mungo HOM05D001210 ORTHO05D001036 4.2e-27 124.8 96 66.7
EL10Ac5g11654 Beta vulgaris HOM05D005755 ORTHO05D007006 1.2e-26 123.2 97 64.9
ATR1096G048 Amborella trichopoda HOM05D005755 ORTHO05D007006 2.7e-26 122.1 98 63.3
Os11g0133900 Oryza sativa ssp. japonica HOM05D005755 ORTHO05D007006 1.3e-25 119.8 98 62.2
SEGI_41538 Sequoiadendron giganteum HOM05D005755 ORTHO05D007006 2.5e-24 115.5 101 58.4
Zm00001eb235420 Zea mays HOM05D005755 ORTHO05D007006 5.6e-24 114.4 97 62.9
Zm00001eb163500 Zea mays HOM05D005755 ORTHO05D007006 1.6e-23 112.8 97 62.9
TPR.G31353 Trifolium pratense HOM05D005755 ORTHO05D007006 3.4e-21 105.1 59 84.7
Os12g0131266 Oryza sativa ssp. japonica HOM05D005755 ORTHO05D007006 5.5e-19 97.8 83 60.2
SMO207G0003 Selaginella moellendorffii HOM05D005755 ORTHO05D007006 2.7e-18 95.5 101 51.5
Glyma.19G087500 Glycine max HOM05D005755 ORTHO05D007006 1.3e-17 93.2 74 64.9
AagrBONN_evm.TU.Sc2ySwM_362.2659 Anthoceros agrestis HOM05D005755 ORTHO05D007006 8.7e-17 90.5 95 50.5
Mapoly0006s0175 Marchantia polymorpha HOM05D005755 ORTHO05D007006 1.5e-16 89.7 101 45.5
Pp3c3_10790 Physcomitrium patens HOM05D005755 ORTHO05D007006 4.8e-15 84.7 99 47.5
Lj3g0006677 Lotus japonicus HOM05D005755 ORTHO05D007006 2.0e-13 79.3 79 53.2
AL792U10010 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 2.9e-12 75.5 59 62.7
A02p12030 Brassica napus HOM05D005755 ORTHO05D007006 6.5e-12 74.3 61 59.0
HanXRQChr14g0436521 Helianthus annuus HOM05D005755 ORTHO05D007006 7.2e-11 70.9 63 50.8
Lj3g0023846 Lotus japonicus HOM05D005755 ORTHO05D007006 1.2e-10 70.1 64 53.1
Prupe.2G218400 Prunus persica HOM05D005755 ORTHO05D007006 3.9e-09 65.1 96 45.8
Haze_18895 Corylus avellana HOM05D005755 ORTHO05D007006 2.2e-07 59.3 75 42.7
CBR_g23899 Chara braunii HOM05D005755 ORTHO05D007006 1.1e-06 57.0 101 33.7


User provided reference genes

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