Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu017213.1 Olea europaea HOM05D006859 ORTHO05D007990 1.8e-149 532.7 299 100.0
Migut.A01048 Erythranthe guttata HOM05D006859 ORTHO05D007990 5.5e-90 335.1 303 66.7
Dinv28858 Davidia involucrata HOM05D006859 ORTHO05D007990 1.7e-86 323.6 290 63.8
Prupe.5G059200 Prunus persica HOM05D006859 ORTHO05D007990 2.2e-83 313.2 292 62.7
CSS0046225 Camellia sinensis var. sinensis HOM05D006859 ORTHO05D007990 1.2e-81 307.4 291 62.9
vmacro00041 Vaccinium macrocarpon HOM05D006859 ORTHO05D007990 1.2e-81 307.4 299 62.2
Actinidia25901 Actinidia chinensis HOM05D006859 ORTHO05D007990 1.4e-80 303.9 291 62.2
Cc08_g11510 Coffea canephora HOM05D006859 ORTHO05D007990 1.5e-79 300.4 300 62.0
QL12p009356 Quercus lobata HOM05D006859 ORTHO05D007990 5.7e-79 298.5 296 58.8
Oeu040677.2 Olea europaea HOM05D006859 ORTHO05D007990 3.1e-77 292.7 189 83.1
Gohir.D08G184600 Gossypium hirsutum HOM05D006859 ORTHO05D007990 7.0e-77 291.6 290 59.7
Duzib205G1414 Durio zibethinus HOM05D006859 ORTHO05D007990 2.0e-76 290.0 309 56.6
Gorai.004G193900 Gossypium raimondii HOM05D006859 ORTHO05D007990 3.5e-76 289.3 290 59.3
TWI15G0070 Tripterygium wilfordii HOM05D006859 ORTHO05D007990 1.7e-75 287.0 292 58.6
Potri.003G082200 Populus trichocarpa HOM05D006859 ORTHO05D007990 2.9e-75 286.2 292 57.2
Sabra03G0053000 Salix brachista HOM05D006859 ORTHO05D007990 6.5e-75 285.0 292 57.2
TAR636G0545 Trochodendron aralioides HOM05D006859 ORTHO05D007990 8.5e-75 284.6 294 61.2
RhsimUnG0092900 Rhododendron simsii HOM05D006859 ORTHO05D007990 1.4e-74 283.9 300 58.7
Atru.chr9.1231 Acer truncatum HOM05D006859 ORTHO05D007990 1.9e-74 283.5 297 58.2
Duzib068G0861 Durio zibethinus HOM05D006859 ORTHO05D007990 1.9e-74 283.5 290 57.2
FvH4_5g20140 Fragaria vesca HOM05D006859 ORTHO05D007990 1.9e-74 283.5 296 56.1
Gohir.A08G165800 Gossypium hirsutum HOM05D006859 ORTHO05D007990 5.5e-74 282.0 290 57.6
Eucgr.D02124 Eucalyptus grandis HOM05D006859 ORTHO05D007990 7.2e-74 281.6 297 56.9
Hund11327 Selenicereus undatus HOM05D006859 ORTHO05D007990 1.6e-73 280.4 292 57.2
Aqoxy7G00861 Aquilegia oxysepala HOM05D006859 ORTHO05D007990 2.7e-73 279.6 295 59.7
Medtr5g013280 Medicago truncatula HOM05D006859 ORTHO05D007990 6.1e-73 278.5 298 58.4
TPR.G31422 Trifolium pratense HOM05D006859 ORTHO05D007990 8.0e-73 278.1 303 58.4
FAN18G2706 Fragaria x ananassa HOM05D006859 ORTHO05D007990 1.0e-72 277.7 297 55.6
FAN08G0582 Fragaria x ananassa HOM05D006859 ORTHO05D007990 6.7e-72 275.0 297 56.6
PGR031G1874 Punica granatum HOM05D006859 ORTHO05D007990 8.8e-72 274.6 298 56.7
PGSC0003DMG400024153 Solanum tuberosum HOM05D006859 ORTHO05D007990 1.1e-71 274.2 323 57.0
MD00G1165000 Malus domestica HOM05D006859 ORTHO05D007990 2.0e-71 273.5 293 58.7
RcHm_v2.0_Chr7g0205091 Rosa chinensis HOM05D006859 ORTHO05D007990 3.3e-71 272.7 292 56.2
CANSAT21G2559 Cannabis sativa HOM05D006859 ORTHO05D007990 9.7e-71 271.2 296 53.7
PSO717G0098 Papaver somniferum HOM05D006859 ORTHO05D007990 1.7e-70 270.4 291 59.1
Cpa.g.sc89.10 Carica papaya HOM05D006859 ORTHO05D007990 6.3e-70 268.5 295 56.3
Phvul.002G001000 Phaseolus vulgaris HOM05D006859 ORTHO05D007990 6.3e-70 268.5 298 56.7
PSO675G5712 Papaver somniferum HOM05D006859 ORTHO05D007990 1.4e-69 267.3 296 57.8
MELO3C003330.2 Cucumis melo HOM05D006859 ORTHO05D007990 4.5e-68 262.3 294 52.0
VMungo1215G2710 Vigna mungo HOM05D006859 ORTHO05D007990 5.9e-68 261.9 303 56.4
Lj2g0014108 Lotus japonicus HOM05D006859 ORTHO05D007990 7.7e-68 261.5 303 56.1
FAN04G1798 Fragaria x ananassa HOM05D006859 ORTHO05D007990 1.3e-67 260.8 296 53.7
EL10Ac5g12291 Beta vulgaris HOM05D006859 ORTHO05D007990 1.7e-67 260.4 297 54.2
Nitab4.5_0003456g0040 Nicotiana tabacum HOM05D006859 ORTHO05D007990 5.0e-67 258.8 318 54.4
Sopen06g021040 Solanum pennellii HOM05D006859 ORTHO05D007990 6.5e-67 258.5 289 59.2
Nn1g00823 Nelumbo nucifera HOM05D006859 ORTHO05D007990 1.5e-66 257.3 301 56.1
Nitab4.5_0000506g0100 Nicotiana tabacum HOM05D006859 ORTHO05D007990 1.5e-66 257.3 279 58.4
MBI04_g28364_MAGBIO Magnolia biondii HOM05D006859 ORTHO05D007990 2.5e-66 256.5 292 56.8
MD04G1050900 Malus domestica HOM05D006859 ORTHO05D007990 5.5e-66 255.4 292 55.8
Manes.01G086700 Manihot esculenta HOM05D006859 ORTHO05D007990 9.4e-66 254.6 290 55.5
Lalb_Chr16g0379391 Lupinus albus HOM05D006859 ORTHO05D007990 2.1e-65 253.4 300 54.7
Glyma.01G205600 Glycine max HOM05D006859 ORTHO05D007990 6.1e-65 251.9 300 55.0
Ciclev10021440m.g Citrus clementina HOM05D006859 ORTHO05D007990 1.0e-64 251.1 298 51.7
CiPaw.11G069300 Carya illinoinensis HOM05D006859 ORTHO05D007990 3.3e-63 246.1 257 56.4
Actinidia02186 Actinidia chinensis HOM05D006859 ORTHO05D007990 2.8e-62 243.0 293 55.6
Psat2g176200 Pisum sativum HOM05D006859 ORTHO05D007990 2.8e-62 243.0 288 56.9
Lj2C227G12 Lonicera japonica HOM05D006859 ORTHO05D007990 9.1e-61 238.0 256 58.2
Solyc06g060890.4 Solanum lycopersicum HOM05D006859 ORTHO05D007990 6.5e-59 231.9 258 57.0
HanXRQChr06g0164541 Helianthus annuus HOM05D006859 ORTHO05D007990 2.5e-58 229.9 292 51.7
arahy.Tifrunner.gnm1.ann1.B2NILF Arachis hypogaea HOM05D006859 ORTHO05D007990 9.4e-58 228.0 331 50.2
arahy.Tifrunner.gnm1.ann1.WYE05V Arachis hypogaea HOM05D006859 ORTHO05D007990 9.4e-58 228.0 331 50.2
ECA236G3610 Erigeron canadensis HOM05D006859 ORTHO05D007990 3.4e-55 219.5 272 52.9
ATR0665G206 Amborella trichopoda HOM05D006859 ORTHO05D007990 4.4e-55 219.2 294 52.4
Cfa012667 Carpinus fangiana HOM05D006859 ORTHO05D007990 3.1e-53 213.0 259 53.7
Gohir.D03G167400 Gossypium hirsutum HOM05D006859 ORTHO05D007990 4.1e-53 212.6 260 49.6
Thecc.03G243500 Theobroma cacao HOM05D006859 ORTHO05D007990 1.3e-51 207.6 219 57.5
CsaV3_3G049860 Cucumis sativus L. HOM05D006859 ORTHO05D007990 1.7e-51 207.2 293 45.4
Lsat_1_v5_gn_1_53480 Lactuca sativa HOM05D006859 ORTHO05D007990 1.1e-50 204.5 293 46.1
SalBow6G1554 Salvia bowleyana HOM05D006859 ORTHO05D007990 1.9e-50 203.8 244 58.2
DCAR_004596 Daucus carota HOM05D006859 ORTHO05D007990 5.5e-50 202.2 263 50.6
Sc01g0008110 Simmondsia chinensis HOM05D006859 ORTHO05D007990 1.6e-49 200.7 221 55.7
Gorai.003G177100 Gossypium raimondii HOM05D006859 ORTHO05D007990 2.1e-49 200.3 260 44.6
unitig_8.g3018 Utricularia gibba HOM05D000481 ORTHO05D007990 2.0e-47 193.7 267 52.8
HPP92_014892 Vanilla planifolia HOM05D006859 ORTHO05D007990 2.0e-47 193.7 294 46.3
Gohir.A03G005200 Gossypium hirsutum HOM05D006859 ORTHO05D007990 4.4e-47 192.6 260 46.9
Os10g0563400 Oryza sativa ssp. japonica HOM05D006859 ORTHO05D007990 5.7e-47 192.2 296 48.0
Zm00001eb391020 Zea mays HOM05D006859 ORTHO05D007990 1.3e-46 191.0 291 48.5
Carub.0007s2385 Capsella rubella HOM05D006859 ORTHO05D007990 1.7e-46 190.7 300 43.7
BcaNung00082 Brassica carinata HOM05D006859 ORTHO05D007990 2.2e-46 190.3 291 45.4
CARHR224240 Cardamine hirsuta HOM05D006859 ORTHO05D007990 4.9e-46 189.1 294 44.2
SGA_v2.0_scaffold199G41240 Striga asiatica HOM05D006859 ORTHO05D007990 3.1e-45 186.4 253 47.8
Sp7g16620 Schrenkiella parvula HOM05D006859 ORTHO05D007990 4.1e-45 186.0 292 43.8
AT4G17540 Arabidopsis thaliana HOM05D006859 ORTHO05D007990 5.4e-45 185.7 299 43.8
BcaC09g51632 Brassica carinata HOM05D006859 ORTHO05D007990 1.2e-44 184.5 293 44.4
AUR62018861 Chenopodium quinoa HOM05D006859 ORTHO05D007990 1.6e-44 184.1 228 48.2
CDE11G0841 Ceratophyllum demersum HOM05D006859 ORTHO05D007990 2.0e-44 183.7 239 52.7
Ca_24604_v3 Cicer arietinum L. HOM05D006859 ORTHO05D007990 3.5e-44 183.0 309 43.0
A01p09620 Brassica napus HOM05D006859 ORTHO05D007990 2.9e-43 179.9 292 43.5
BolC1t01085H Brassica oleracea HOM05D006859 ORTHO05D007990 2.9e-43 179.9 294 43.9
Peaxi162Scf00190g00099 Petunia axillaris HOM05D006859 ORTHO05D007990 2.9e-43 179.9 213 51.2
C01p11190 Brassica napus HOM05D006859 ORTHO05D007990 5.0e-43 179.1 294 43.9
CAN.G62.4 Capsicum annuum HOM05D006859 ORTHO05D007990 5.0e-43 179.1 203 51.2
BraA01t00904Z Brassica rapa HOM05D006859 ORTHO05D007990 8.6e-43 178.3 292 43.2
Thhalv10025654m.g Eutrema salsugineum HOM05D006859 ORTHO05D007990 3.3e-42 176.4 291 42.6
THA.LOC104798356 Tarenaya hassleriana HOM05D006859 ORTHO05D007990 4.3e-42 176.0 291 43.3
Hma1.2p1_0840F.1_g226470 Hydrangea macrophylla HOM05D006859 ORTHO05D007990 6.8e-40 168.7 272 41.9
Glyma.11G037300 Glycine max HOM05D006859 ORTHO05D007990 5.8e-39 165.6 236 43.6
ClCG09G012800 Citrullus lanatus HOM05D006859 ORTHO05D007990 1.7e-38 164.1 270 38.5
AUR62007150 Chenopodium quinoa HOM05D006859 ORTHO05D007990 1.6e-33 147.5 220 44.1
AL7G37080 Arabidopsis lyrata HOM05D006859 ORTHO05D007990 4.4e-31 139.4 254 39.4
Aa31LG6G280 Aethionema arabicum HOM05D006859 ORTHO05D007990 7.0e-29 132.1 259 39.4
DCAR_008336 Daucus carota HOM05D002294 ORTHO05D002367 2.7e-28 130.2 260 36.2
Sed0000052 Sechium edule HOM05D006859 ORTHO05D007990 2.3e-27 127.1 188 39.9
GSVIVG01007347001 Vitis vinifera HOM05D006859 ORTHO05D007990 3.0e-27 126.7 79 82.3
AagrBONN_evm.TU.Sc2ySwM_228.2564 Anthoceros agrestis HOM05D006859 ORTHO05D007990 3.3e-18 96.7 304 33.6
Ah.07g199030 Amaranthus hybridus HOM05D006859 ORTHO05D007990 5.2e-16 89.4 61 78.7
VMungo1215G2895 Vigna mungo HOM05D006859 ORTHO05D007990 8.9e-16 88.6 244 29.5
Glyma.11G037400 Glycine max HOM05D006859 ORTHO05D007990 7.6e-15 85.5 275 30.5
GSVIVG01007348001 Vitis vinifera HOM05D006859 ORTHO05D007990 4.9e-14 82.8 130 38.5
Mapoly0075s0082 Marchantia polymorpha HOM05D006859 ORTHO05D007990 1.9e-13 80.9 117 52.1
CDE11G0285 Ceratophyllum demersum HOM05D006859 ORTHO05D007990 1.2e-12 78.2 94 52.1
Phvul.002G001100 Phaseolus vulgaris HOM05D006859 ORTHO05D007990 2.3e-11 73.9 243 32.5
PSO717G0090 Papaver somniferum HOM05D006859 ORTHO05D007990 1.9e-10 70.9 258 30.6
Pp3c27_6080 Physcomitrium patens HOM05D006859 ORTHO05D007990 1.9e-10 70.9 292 33.9
CBR_g52283 Chara braunii HOM05D006859 ORTHO05D007990 5.6e-10 69.3 332 33.1
COL.COLO4_21682 Corchorus olitorius HOM05D006859 ORTHO05D007990 1.6e-09 67.8 152 33.6
HPP92_014890 Vanilla planifolia HOM05D006859 ORTHO05D007990 1.4e-08 64.7 74 48.6


User provided reference genes

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