Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu017204.1 Olea europaea HOM05D005248 ORTHO05D006409 4.6e-100 367.9 181 100.0
Oeu051184.1 Olea europaea HOM05D005248 ORTHO05D006409 1.1e-82 310.1 181 85.6
Dinv13708 Davidia involucrata HOM05D005248 ORTHO05D006409 4.4e-74 281.6 188 75.5
SalBow1G4990 Salvia bowleyana HOM05D005248 ORTHO05D006409 2.2e-73 279.3 181 73.5
MSTRG.22815 Avicennia marina HOM05D005248 ORTHO05D006409 6.3e-73 277.7 181 75.7
CAN.G1008.49 Capsicum annuum HOM05D005248 ORTHO05D006409 1.2e-71 273.5 185 71.9
Nitab4.5_0000976g0180 Nicotiana tabacum HOM05D005248 ORTHO05D006409 1.3e-70 270.0 185 70.8
Cc04_g05750 Coffea canephora HOM05D005248 ORTHO05D006409 2.2e-70 269.2 185 71.4
PGSC0003DMG400014171 Solanum tuberosum HOM05D005248 ORTHO05D006409 5.0e-70 268.1 185 69.2
Sopen03g037010 Solanum pennellii HOM05D005248 ORTHO05D006409 8.5e-70 267.3 185 69.2
SGA_v2.0_scaffold37G14670 Striga asiatica HOM05D005248 ORTHO05D006409 4.2e-69 265.0 181 72.9
SGA_v2.0_scaffold44G16640 Striga asiatica HOM05D005248 ORTHO05D006409 5.5e-69 264.6 178 72.5
Hma1.2p1_0452F.1_g155900 Hydrangea macrophylla HOM05D005248 ORTHO05D006409 3.0e-67 258.8 188 68.1
Thecc.03G142000 Theobroma cacao HOM05D005248 ORTHO05D006409 5.7e-66 254.6 182 70.3
CSS0031400 Camellia sinensis var. sinensis HOM05D005248 ORTHO05D006409 6.3e-65 251.1 189 66.7
Cfa018696 Carpinus fangiana HOM05D005248 ORTHO05D006409 8.2e-65 250.8 182 69.2
Actinidia25510 Actinidia chinensis HOM05D005248 ORTHO05D006409 1.8e-64 249.6 188 66.5
QL10p000295 Quercus lobata HOM05D005248 ORTHO05D006409 7.0e-64 247.7 181 69.1
Duzib205G1954 Durio zibethinus HOM05D005248 ORTHO05D006409 2.0e-63 246.1 182 67.6
Migut.I00662 Erythranthe guttata HOM05D005248 ORTHO05D006409 2.0e-63 246.1 181 69.1
Peaxi162Scf00314g00750 Petunia axillaris HOM05D005248 ORTHO05D006409 5.9e-63 244.6 183 66.1
Rhsim08G0198900 Rhododendron simsii HOM05D005248 ORTHO05D006409 7.7e-63 244.2 153 75.2
CSS0027803 Camellia sinensis var. sinensis HOM05D005248 ORTHO05D006409 1.0e-62 243.8 184 65.8
COL.COLO4_37271 Corchorus olitorius HOM05D005248 ORTHO05D006409 1.0e-62 243.8 182 67.6
Ciclev10032866m.g Citrus clementina HOM05D005248 ORTHO05D006409 1.3e-62 243.4 189 65.1
Gohir.A07G046300 Gossypium hirsutum HOM05D005248 ORTHO05D006409 1.3e-62 243.4 182 68.1
Gohir.D07G050600 Gossypium hirsutum HOM05D005248 ORTHO05D006409 1.7e-62 243.0 182 67.0
GSVIVG01005682001 Vitis vinifera HOM05D005248 ORTHO05D006409 1.7e-62 243.0 135 82.2
Gorai.001G053700 Gossypium raimondii HOM05D005248 ORTHO05D006409 2.2e-62 242.7 182 67.6
Atru.chr6.1938 Acer truncatum HOM05D005248 ORTHO05D006409 5.0e-62 241.5 225 60.0
Lj5A86T66 Lonicera japonica HOM05D005248 ORTHO05D006409 2.5e-61 239.2 190 64.7
ECA247G0315 Erigeron canadensis HOM05D005248 ORTHO05D000263 3.2e-61 238.8 165 67.3
TAR371G0926 Trochodendron aralioides HOM05D005248 ORTHO05D006409 5.5e-61 238.0 187 64.7
CANSAT78G1265 Cannabis sativa HOM05D005248 ORTHO05D006409 3.6e-60 235.3 197 62.4
Lsat_1_v5_gn_1_30140 Lactuca sativa HOM05D005248 ORTHO05D006409 6.1e-60 234.6 189 62.4
vmacro19110 Vaccinium macrocarpon HOM05D005248 ORTHO05D006409 8.0e-60 234.2 184 64.1
unitig_61.g26221 Utricularia gibba HOM05D005248 ORTHO05D006409 1.4e-59 233.4 181 65.7
Potri.015G108300 Populus trichocarpa HOM05D005248 ORTHO05D006409 2.3e-59 232.6 184 63.6
Aqoxy4G00470 Aquilegia oxysepala HOM05D005248 ORTHO05D006409 3.0e-59 232.3 188 62.8
Cpa.g.sc13.186 Carica papaya HOM05D005248 ORTHO05D006409 3.0e-59 232.3 190 64.2
HanXRQChr02g0034361 Helianthus annuus HOM05D005248 ORTHO05D006409 3.0e-59 232.3 191 59.2
DCAR_025638 Daucus carota HOM05D005248 ORTHO05D006409 4.0e-59 231.9 193 60.1
Aqoxy5G00839 Aquilegia oxysepala HOM05D005248 ORTHO05D006409 5.2e-59 231.5 186 66.1
Prupe.5G140100 Prunus persica HOM05D005248 ORTHO05D006409 5.2e-59 231.5 182 64.8
THA.LOC104825042 Tarenaya hassleriana HOM05D005248 ORTHO05D006409 8.8e-59 230.7 186 64.0
MELO3C008773.2 Cucumis melo HOM05D005248 ORTHO05D006409 1.2e-58 230.3 179 63.1
Psat7g039840 Pisum sativum HOM05D005248 ORTHO05D006409 1.5e-58 229.9 168 69.0
TWI39G0330 Tripterygium wilfordii HOM05D005248 ORTHO05D006409 2.0e-58 229.6 186 62.4
Atru.chr10.902 Acer truncatum HOM05D005248 ORTHO05D006409 2.6e-58 229.2 162 69.1
AT5G51040 Arabidopsis thaliana HOM05D005248 ORTHO05D006409 3.3e-58 228.8 141 72.3
Lj1g0011989 Lotus japonicus HOM05D005248 ORTHO05D006409 4.4e-58 228.4 184 62.5
RcHm_v2.0_Chr7g0188501 Rosa chinensis HOM05D005248 ORTHO05D006409 5.7e-58 228.0 188 64.4
Sed0027310 Sechium edule HOM05D005248 ORTHO05D006409 5.7e-58 228.0 197 59.4
MD14G1145800 Malus domestica HOM05D005248 ORTHO05D006409 9.7e-58 227.3 183 63.9
vmacro16762 Vaccinium macrocarpon HOM05D005248 ORTHO05D006409 9.7e-58 227.3 157 70.1
Haze_07087 Corylus avellana HOM05D005248 ORTHO05D006409 1.3e-57 226.9 223 56.5
CsaV3_2G009360 Cucumis sativus L. HOM05D005248 ORTHO05D006409 1.3e-57 226.9 166 65.1
Sabra12G0080100 Salix brachista HOM05D005248 ORTHO05D006409 2.2e-57 226.1 184 63.6
FAN08G1048 Fragaria x ananassa HOM05D005248 ORTHO05D006409 2.8e-57 225.7 182 65.4
Medtr3g098480 Medicago truncatula HOM05D005248 ORTHO05D006409 3.7e-57 225.3 182 63.2
AL8G25260 Arabidopsis lyrata HOM05D005248 ORTHO05D006409 4.8e-57 224.9 177 60.5
BraSC35t45996Z Brassica rapa HOM05D005248 ORTHO05D006409 6.3e-57 224.6 141 70.9
FAN04G2277 Fragaria x ananassa HOM05D005248 ORTHO05D006409 6.3e-57 224.6 182 64.8
Nitab4.5_0012624g0030 Nicotiana tabacum HOM05D005248 ORTHO05D006409 6.3e-57 224.6 150 70.0
A10p08030 Brassica napus HOM05D005248 ORTHO05D006409 8.3e-57 224.2 141 70.9
FAN13G2612 Fragaria x ananassa HOM05D005248 ORTHO05D006409 8.3e-57 224.2 182 64.8
Medtr8g096070 Medicago truncatula HOM05D005248 ORTHO05D006409 8.3e-57 224.2 185 62.7
Glyma.04G202600 Glycine max HOM05D005248 ORTHO05D006409 1.1e-56 223.8 181 60.2
FvH4_5g09730 Fragaria vesca HOM05D005248 ORTHO05D006409 1.4e-56 223.4 182 64.8
Phvul.009G158800 Phaseolus vulgaris HOM05D005248 ORTHO05D006409 1.4e-56 223.4 186 61.3
vmacro19116 Vaccinium macrocarpon HOM05D000402 ORTHO05D000263 1.4e-56 223.4 199 58.3
CARHR257090 Cardamine hirsuta HOM05D005248 ORTHO05D006409 1.8e-56 223.0 141 70.9
ClCG11G000550 Citrullus lanatus HOM05D005248 ORTHO05D006409 1.8e-56 223.0 179 62.6
PSO782G4423 Papaver somniferum HOM05D005248 ORTHO05D006409 1.8e-56 223.0 196 59.7
FAN18G0065 Fragaria x ananassa HOM05D005248 ORTHO05D006409 3.1e-56 222.2 182 64.8
arahy.Tifrunner.gnm1.ann1.1UQX8S Arachis hypogaea HOM05D005248 ORTHO05D006409 4.1e-56 221.9 181 62.4
Carub.0008s1104 Capsella rubella HOM05D005248 ORTHO05D006409 4.1e-56 221.9 141 71.6
Sp6g13210 Schrenkiella parvula HOM05D005248 ORTHO05D006409 5.3e-56 221.5 141 68.8
A02p12520 Brassica napus HOM05D005248 ORTHO05D006409 7.0e-56 221.1 141 71.6
BolC9t56844H Brassica oleracea HOM05D005248 ORTHO05D006409 7.0e-56 221.1 142 70.4
PSO063G1686 Papaver somniferum HOM05D005248 ORTHO05D006409 7.0e-56 221.1 196 59.2
Manes.14G043700 Manihot esculenta HOM05D005248 ORTHO05D006409 1.2e-55 220.3 189 61.9
Nn3g16250 Nelumbo nucifera HOM05D005248 ORTHO05D006409 1.2e-55 220.3 186 62.4
BcaB05g24022 Brassica carinata HOM05D005248 ORTHO05D006409 1.6e-55 219.9 151 68.2
Glyma.06G162900 Glycine max HOM05D005248 ORTHO05D006409 2.0e-55 219.5 184 61.4
arahy.Tifrunner.gnm1.ann1.JK6BKQ Arachis hypogaea HOM05D005248 ORTHO05D006409 5.9e-55 218.0 181 61.3
arahy.Tifrunner.gnm1.ann1.X29WZH Arachis hypogaea HOM05D005248 ORTHO05D006409 7.7e-55 217.6 181 61.9
Thhalv10014773m.g Eutrema salsugineum HOM05D005248 ORTHO05D006409 7.7e-55 217.6 174 60.9
MD06G1128800 Malus domestica HOM05D005248 ORTHO05D006409 7.7e-55 217.6 181 60.8
Hund10025 Selenicereus undatus HOM05D005248 ORTHO05D006409 7.7e-55 217.6 189 58.2
arahy.Tifrunner.gnm1.ann1.4X1L65 Arachis hypogaea HOM05D005248 ORTHO05D006409 1.0e-54 217.2 181 58.6
Lalb_Chr12g0202581 Lupinus albus HOM05D005248 ORTHO05D006409 1.0e-54 217.2 183 62.3
Sc14g0003150 Simmondsia chinensis HOM05D005248 ORTHO05D006409 1.0e-54 217.2 134 72.4
Eucgr.H01475 Eucalyptus grandis HOM05D005248 ORTHO05D006409 1.3e-54 216.9 194 59.8
Nitab4.5_0010893g0020 Nicotiana tabacum HOM05D005248 ORTHO05D006409 1.3e-54 216.9 159 69.2
VMungo0251G2692 Vigna mungo HOM05D005248 ORTHO05D006409 1.7e-54 216.5 181 59.7
EL10Ac5g11271 Beta vulgaris HOM05D005248 ORTHO05D006409 2.2e-54 216.1 132 71.2
Aa31LG3G7530 Aethionema arabicum HOM05D005248 ORTHO05D006409 2.9e-54 215.7 204 56.4
BraA02t06314Z Brassica rapa HOM05D005248 ORTHO05D006409 3.8e-54 215.3 148 68.9
BcaC03g14629 Brassica carinata HOM05D005248 ORTHO05D006409 8.5e-54 214.2 172 62.8
Ca_16820_v3 Cicer arietinum L. HOM05D000402 ORTHO05D000263 8.5e-54 214.2 154 66.2
AUR62043379 Chenopodium quinoa HOM05D005248 ORTHO05D006409 1.5e-53 213.4 185 57.8
AUR62032207 Chenopodium quinoa HOM05D005248 ORTHO05D006409 1.9e-53 213.0 190 57.4
PGR119G0545 Punica granatum HOM05D005248 ORTHO05D006409 2.5e-53 212.6 192 56.2
AUR62043864 Chenopodium quinoa HOM05D005248 ORTHO05D006409 3.2e-53 212.2 185 57.3
C09p39650 Brassica napus HOM05D005248 ORTHO05D006409 1.2e-52 210.3 141 67.4
Lj9C488G13 Lonicera japonica HOM05D005248 ORTHO05D006409 2.1e-52 209.5 115 80.0
Hund02516 Selenicereus undatus HOM05D005248 ORTHO05D006409 4.7e-52 208.4 180 58.9
Zm00001eb198100 Zea mays HOM05D005248 ORTHO05D006409 8.0e-52 207.6 139 66.2
CiPaw.12G000300 Carya illinoinensis HOM05D005248 ORTHO05D006409 1.0e-51 207.2 165 66.7
Glyma.08G007100 Glycine max HOM05D005248 ORTHO05D006409 6.8e-51 204.5 167 61.1
Ah.11g047000 Amaranthus hybridus HOM05D005248 ORTHO05D006409 1.5e-50 203.4 185 54.6
BolC2t08204H Brassica oleracea HOM05D005248 ORTHO05D006409 3.4e-50 202.2 181 59.7
Os11g0528300 Oryza sativa ssp. japonica HOM05D005248 ORTHO05D006409 7.5e-50 201.1 129 70.5
CSS0028005 Camellia sinensis var. sinensis HOM05D005248 ORTHO05D006409 1.3e-49 200.3 161 62.7
CDE06G0011 Ceratophyllum demersum HOM05D005248 ORTHO05D006409 2.8e-49 199.1 185 57.3
Sabra15G0130900 Salix brachista HOM05D001551 ORTHO05D000263 2.8e-49 199.1 247 46.2
HPP92_006440 Vanilla planifolia HOM05D005248 ORTHO05D006409 3.7e-49 198.7 182 59.9
ATR0582G036 Amborella trichopoda HOM05D005248 ORTHO05D006409 7.0e-48 194.5 183 59.6
C02p20620 Brassica napus HOM05D005248 ORTHO05D006409 1.2e-47 193.7 117 71.8
Lsat_1_v5_gn_9_37901 Lactuca sativa HOM05D005248 ORTHO05D006409 3.5e-47 192.2 150 63.3
Sabra15G0128600 Salix brachista HOM05D005248 ORTHO05D006409 7.7e-47 191.0 271 42.8
PSO541G2841 Papaver somniferum HOM05D005248 ORTHO05D006409 3.3e-45 185.7 128 70.3
SMO146G0118 Selaginella moellendorffii HOM05D005248 ORTHO05D006409 1.1e-37 160.6 123 57.7
Nitab4.5_0002540g0030 Nicotiana tabacum HOM05D005248 ORTHO05D006409 1.6e-36 156.8 130 65.4
Gohir.A07G044532 Gossypium hirsutum HOM05D005248 ORTHO05D006409 6.1e-36 154.8 87 75.9
Mapoly0022s0036 Marchantia polymorpha HOM05D005248 ORTHO05D006409 2.3e-35 152.9 124 57.3
Pp3c16_25170 Physcomitrium patens HOM05D005248 ORTHO05D006409 3.1e-35 152.5 125 52.8
Rhsim12G0181600 Rhododendron simsii HOM05D005248 ORTHO05D006409 4.0e-35 152.1 88 78.4
PSO675G1946 Papaver somniferum HOM05D005248 ORTHO05D006409 1.1e-32 144.1 109 67.9
Lj4g0025558 Lotus japonicus HOM05D005248 ORTHO05D006409 1.2e-31 140.6 150 55.3
Gohir.A11G038833 Gossypium hirsutum HOM05D005248 ORTHO05D006409 3.3e-29 132.5 86 67.4
Cre12.g550750 Chlamydomonas reinhardtii HOM05D005248 ORTHO05D006409 2.8e-28 129.4 154 44.2
BcaC04g20744 Brassica carinata HOM05D005248 ORTHO05D006409 8.0e-28 127.9 72 73.6
Zm00001eb113310 Zea mays HOM05D005248 ORTHO05D006409 1.4e-27 127.1 79 68.4
TPR.G12753 Trifolium pratense HOM05D005248 ORTHO05D006409 4.0e-27 125.6 72 72.2
QL10p017282 Quercus lobata HOM05D005248 ORTHO05D006409 4.1e-24 115.5 65 73.8
TPR.G20580 Trifolium pratense HOM05D005248 ORTHO05D006409 8.6e-22 107.8 115 57.4
CAN.G412.4 Capsicum annuum HOM05D005248 ORTHO05D006409 2.8e-20 102.8 60 73.3
PRCOL_00003706 Prasinoderma coloniale HOM05D005248 ORTHO05D006409 3.6e-20 102.4 113 42.5
MCO01G238 Micromonas commoda HOM05D005248 ORTHO05D006409 1.8e-19 100.1 102 43.1
Gorai.007G045300 Gossypium raimondii HOM05D005248 ORTHO05D006409 2.5e-13 79.7 86 57.0
TPR.G21935 Trifolium pratense HOM05D005248 ORTHO05D006409 1.4e-08 63.9 35 71.4
SGA_v2.0_scaffold5G02809 Striga asiatica HOM05D005248 ORTHO05D006409 2.1e-07 60.1 145 35.9
AagrBONN_evm.TU.Sc2ySwM_368.2623 Anthoceros agrestis HOM05D005248 ORTHO05D006409 6.0e-07 58.5 52 50.0


User provided reference genes

Program Settings