Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu017118.1 Olea europaea HOM05D005635 ORTHO05D006838 3.4e-207 724.9 410 100.0
Cfa015678 Carpinus fangiana HOM05D005635 ORTHO05D006838 5.7e-98 362.1 406 51.7
Dinv18319 Davidia involucrata HOM05D005635 ORTHO05D006838 5.4e-96 355.5 405 56.3
QL10p057166 Quercus lobata HOM05D005635 ORTHO05D006838 9.2e-96 354.8 408 49.0
QL10p057536 Quercus lobata HOM05D005635 ORTHO05D006838 9.2e-96 354.8 408 49.0
Migut.D00990 Erythranthe guttata HOM05D005635 ORTHO05D006838 4.6e-95 352.4 379 53.6
GSVIVG01038182001 Vitis vinifera HOM05D005635 ORTHO05D006838 1.9e-93 347.1 387 54.0
Atru.chr4.1471 Acer truncatum HOM05D005635 ORTHO05D006838 1.6e-92 344.0 388 54.4
SalBow7G2884 Salvia bowleyana HOM05D005635 ORTHO05D006838 2.8e-92 343.2 407 49.1
vmacro00684 Vaccinium macrocarpon HOM05D005635 ORTHO05D006838 2.2e-89 333.6 381 54.3
TAR362G0201 Trochodendron aralioides HOM05D005635 ORTHO05D006838 2.9e-89 333.2 409 50.4
CSS0001444 Camellia sinensis var. sinensis HOM05D005635 ORTHO05D006838 8.3e-89 331.6 403 52.4
TWI15G0946 Tripterygium wilfordii HOM05D005635 ORTHO05D006838 9.2e-88 328.2 397 51.9
SalBow1G7464 Salvia bowleyana HOM05D005635 ORTHO05D006838 2.7e-87 326.6 374 51.6
CANSAT56G0139 Cannabis sativa HOM05D005635 ORTHO05D006838 5.0e-86 322.4 388 46.4
Solyc03g059180.4 Solanum lycopersicum HOM05D005635 ORTHO05D006838 5.0e-86 322.4 387 51.7
Sopen03g013370 Solanum pennellii HOM05D005635 ORTHO05D006838 6.6e-86 322.0 387 51.4
arahy.Tifrunner.gnm1.ann1.0WSK8D Arachis hypogaea HOM05D005635 ORTHO05D006838 2.5e-85 320.1 380 45.8
Potri.013G128300 Populus trichocarpa HOM05D005635 ORTHO05D006838 5.6e-85 318.9 405 45.9
MD15G1148200 Malus domestica HOM05D005635 ORTHO05D006838 7.3e-85 318.5 411 45.5
arahy.Tifrunner.gnm1.ann1.KV01DF Arachis hypogaea HOM05D005635 ORTHO05D006838 2.8e-84 316.6 379 45.9
Haze_00856 Corylus avellana HOM05D005635 ORTHO05D006838 2.8e-84 316.6 378 51.1
Rhsim09G0007900 Rhododendron simsii HOM05D005635 ORTHO05D006838 3.6e-84 316.2 376 55.1
DCAR_029617 Daucus carota HOM05D005635 ORTHO05D006838 6.2e-84 315.5 394 45.2
Nn7g37529 Nelumbo nucifera HOM05D005635 ORTHO05D006838 3.1e-83 313.2 390 46.2
CiPaw.01G169400 Carya illinoinensis HOM05D005635 ORTHO05D006838 4.0e-83 312.8 390 49.5
Manes.05G131200 Manihot esculenta HOM05D005635 ORTHO05D006838 4.0e-83 312.8 391 50.9
Prupe.7G266600 Prunus persica HOM05D005635 ORTHO05D006838 5.2e-83 312.4 405 47.4
Cpa.g.sc9.387 Carica papaya HOM05D005635 ORTHO05D006838 2.6e-82 310.1 386 44.0
AL5G41820 Arabidopsis lyrata HOM05D005635 ORTHO05D006838 4.4e-82 309.3 375 44.3
Lj3C160T4 Lonicera japonica HOM05D005635 ORTHO05D006838 5.8e-82 308.9 407 50.4
MD02G1004500 Malus domestica HOM05D005635 ORTHO05D006838 5.8e-82 308.9 405 44.4
BolC6t37802H Brassica oleracea HOM05D005635 ORTHO05D006838 1.3e-81 307.8 382 44.2
Duzib151G1049 Durio zibethinus HOM05D005635 ORTHO05D006838 2.2e-81 307.0 404 47.3
BcaC08g45005 Brassica carinata HOM05D005635 ORTHO05D006838 1.1e-80 304.7 380 46.3
BraA07t30126Z Brassica rapa HOM05D005635 ORTHO05D006838 1.1e-80 304.7 382 43.7
Hma1.2p1_1156F.1_g262300 Hydrangea macrophylla HOM05D005635 ORTHO05D006838 4.1e-80 302.8 394 50.5
C06p26400 Brassica napus HOM05D005635 ORTHO05D006838 1.2e-79 301.2 376 46.3
Cc03_g14460 Coffea canephora HOM05D005635 ORTHO05D006838 1.2e-79 301.2 405 46.9
Gorai.006G232500 Gossypium raimondii HOM05D005635 ORTHO05D006838 1.2e-79 301.2 371 48.0
Medtr3g084030 Medicago truncatula HOM05D005635 ORTHO05D006838 4.6e-79 299.3 389 43.4
Sp5g03370 Schrenkiella parvula HOM05D005635 ORTHO05D006838 7.8e-79 298.5 382 42.7
Hma1.2p1_1156F.1_g262310 Hydrangea macrophylla HOM05D005635 ORTHO05D006838 1.0e-78 298.1 294 53.1
Glyma.18G001800 Glycine max HOM05D005635 ORTHO05D006838 3.9e-78 296.2 386 48.7
Gohir.A09G213616 Gossypium hirsutum HOM05D005635 ORTHO05D006838 3.9e-78 296.2 371 48.0
Eucgr.L00011 Eucalyptus grandis HOM05D005635 ORTHO05D006838 5.1e-78 295.8 295 53.2
Gohir.D09G212700 Gossypium hirsutum HOM05D005635 ORTHO05D006838 5.1e-78 295.8 371 47.4
BcaB02g07447 Brassica carinata HOM05D005635 ORTHO05D006838 8.6e-78 295.0 380 42.1
A07p24820 Brassica napus HOM05D005635 ORTHO05D006838 8.6e-78 295.0 378 49.5
RcHm_v2.0_Chr2g0085171 Rosa chinensis HOM05D005635 ORTHO05D006838 1.9e-77 293.9 294 53.4
AUR62002413 Chenopodium quinoa HOM05D005635 ORTHO05D006838 3.3e-77 293.1 380 41.3
Thecc.04G163300 Theobroma cacao HOM05D005635 ORTHO05D006838 3.3e-77 293.1 405 47.7
MBI07_g33481_MAGBIO Magnolia biondii HOM05D005635 ORTHO05D006838 4.3e-77 292.7 375 48.5
VMungo1383G0014 Vigna mungo HOM05D005635 ORTHO05D006838 4.3e-77 292.7 386 42.5
Thhalv10005829m.g Eutrema salsugineum HOM05D005635 ORTHO05D006838 9.5e-77 291.6 388 46.1
Glyma.11G255300 Glycine max HOM05D005635 ORTHO05D006838 9.5e-77 291.6 386 48.7
Phvul.001G267200 Phaseolus vulgaris HOM05D005635 ORTHO05D006838 1.2e-76 291.2 383 42.6
Lj6g0024009 Lotus japonicus HOM05D005635 ORTHO05D006838 1.6e-76 290.8 382 48.4
Aa31LG10G14030 Aethionema arabicum HOM05D005635 ORTHO05D006838 2.8e-76 290.0 401 40.9
THA.LOC104802334 Tarenaya hassleriana HOM05D005635 ORTHO05D006838 3.6e-76 289.7 390 40.5
Sabra13G0107200 Salix brachista HOM05D005635 ORTHO05D006838 2.3e-75 287.0 292 51.4
FAN23G1844 Fragaria x ananassa HOM05D005635 ORTHO05D006838 3.1e-75 286.6 394 50.0
Ca_16400_v3 Cicer arietinum L. HOM05D005635 ORTHO05D006838 6.8e-75 285.4 369 43.1
Sed0015570 Sechium edule HOM05D005635 ORTHO05D006838 1.2e-74 284.6 404 48.3
AT3G59780 Arabidopsis thaliana HOM05D005635 ORTHO05D006838 2.0e-74 283.9 336 44.6
Duzib212G0953 Durio zibethinus HOM05D005635 ORTHO05D006838 4.4e-74 282.7 405 45.4
SGA_v2.0_scaffold66G22529 Striga asiatica HOM05D005635 ORTHO05D006838 7.6e-74 282.0 403 44.2
FvH4_1g00540 Fragaria vesca HOM05D005635 ORTHO05D006838 2.2e-73 280.4 294 51.4
PGR042G2382 Punica granatum HOM05D005635 ORTHO05D006838 1.9e-72 277.3 405 46.7
MELO3C010738.2 Cucumis melo HOM05D005635 ORTHO05D006838 2.4e-72 276.9 391 48.1
PSO832G1829 Papaver somniferum HOM05D005635 ORTHO05D006838 3.2e-72 276.6 376 45.7
Gohir.D10G121800 Gossypium hirsutum HOM05D005635 ORTHO05D006838 7.1e-72 275.4 405 47.2
CARHR170120 Cardamine hirsuta HOM05D005635 ORTHO05D006838 2.1e-71 273.9 377 48.0
CsaV3_2G025410 Cucumis sativus L. HOM05D005635 ORTHO05D006838 2.1e-71 273.9 391 48.6
Gorai.011G133900 Gossypium raimondii HOM05D005635 ORTHO05D006838 2.7e-71 273.5 405 46.9
ClCG08G017200 Citrullus lanatus HOM05D005635 ORTHO05D006838 4.6e-71 272.7 383 48.0
Peaxi162Scf00883g00320 Petunia axillaris HOM05D005635 ORTHO05D006838 4.6e-71 272.7 362 42.8
Gohir.A10G145200 Gossypium hirsutum HOM05D005635 ORTHO05D006838 2.3e-70 270.4 405 46.7
AUR62023776 Chenopodium quinoa HOM05D005635 ORTHO05D006838 1.5e-69 267.7 380 38.7
Psat5g100720 Pisum sativum HOM05D005635 ORTHO05D006838 2.5e-69 266.9 294 48.0
FAN28G2262 Fragaria x ananassa HOM05D005635 ORTHO05D006838 5.6e-69 265.8 296 50.0
PSO210G4833 Papaver somniferum HOM05D005635 ORTHO05D006838 1.6e-68 264.2 290 48.6
HanXRQChr02g0059091 Helianthus annuus HOM05D005635 ORTHO05D006838 2.1e-68 263.8 352 42.3
Hund22526 Selenicereus undatus HOM05D005635 ORTHO05D006838 1.1e-67 261.5 405 37.8
Nitab4.5_0000064g0020 Nicotiana tabacum HOM05D005635 ORTHO05D006838 1.8e-67 260.8 388 43.6
EL10Ac3g06107 Beta vulgaris HOM05D005635 ORTHO05D006838 8.9e-67 258.5 382 39.8
Aqoxy5G00015 Aquilegia oxysepala HOM05D005635 ORTHO05D006838 3.4e-66 256.5 376 39.9
TPR.G17194 Trifolium pratense HOM05D005635 ORTHO05D006838 4.4e-66 256.1 405 40.0
Sc19g0006380 Simmondsia chinensis HOM05D005635 ORTHO05D006838 9.9e-66 255.0 288 47.6
Lalb_Chr23g0278351 Lupinus albus HOM05D005635 ORTHO05D006838 4.9e-65 252.7 360 42.8
ATR0743G254 Amborella trichopoda HOM05D005635 ORTHO05D006838 2.5e-61 240.4 353 38.2
Os01g0896500 Oryza sativa ssp. japonica HOM05D005635 ORTHO05D006838 4.0e-59 233.0 354 38.4
FAN26G0446 Fragaria x ananassa HOM05D005635 ORTHO05D006838 1.5e-58 231.1 266 47.0
Lsat_1_v5_gn_6_67720 Lactuca sativa HOM05D005635 ORTHO05D006838 6.4e-57 225.7 348 45.4
Nitab4.5_0002913g0010 Nicotiana tabacum HOM05D005635 ORTHO05D006838 4.2e-56 223.0 343 42.3
CAN.G207.4 Capsicum annuum HOM05D005635 ORTHO05D006838 5.4e-56 222.6 259 46.7
Zm00001eb144770 Zea mays HOM05D005635 ORTHO05D006838 2.7e-55 220.3 380 34.5
Sed0022147 Sechium edule HOM05D005635 ORTHO05D006838 4.6e-55 219.5 388 42.0
unitig_32.g10984 Utricularia gibba HOM05D005635 ORTHO05D006838 4.8e-52 209.5 398 36.7
HPP92_007033 Vanilla planifolia HOM05D005635 ORTHO05D006838 6.2e-52 209.1 357 34.2
HPP92_007065 Vanilla planifolia HOM05D005635 ORTHO05D006838 1.4e-51 208.0 357 33.6
SEGI_21812 Sequoiadendron giganteum HOM05D005635 ORTHO05D006838 5.5e-48 196.1 383 33.4
ECA233G1690 Erigeron canadensis HOM05D005635 ORTHO05D006838 1.9e-45 187.6 286 40.2
Mapoly0056s0110 Marchantia polymorpha HOM05D005635 ORTHO05D006838 3.2e-40 170.2 276 36.2
Pp3c5_10150 Physcomitrium patens HOM05D005635 ORTHO05D006838 6.7e-38 162.5 295 33.6
AagrBONN_evm.TU.Sc2ySwM_344.4224 Anthoceros agrestis HOM05D005635 ORTHO05D006838 7.9e-31 139.0 274 31.8
Atru.chr4.1498 Acer truncatum HOM05D005635 ORTHO05D006838 2.2e-28 131.0 87 74.7
Carub.0005s2649 Capsella rubella HOM05D005635 ORTHO05D006838 3.7e-28 130.2 228 32.0
CBR_g30747 Chara braunii HOM05D005635 ORTHO05D006838 2.2e-25 120.9 242 27.7
CSS0016204 Camellia sinensis var. sinensis HOM05D005635 ORTHO05D006838 1.4e-24 118.2 91 64.8
Atru.chr4.1500 Acer truncatum HOM05D005635 ORTHO05D006838 4.4e-13 80.1 132 53.0
Ca_19887_v3 Cicer arietinum L. HOM05D005635 ORTHO05D006838 4.8e-12 76.6 148 33.8
PGR044G2256 Punica granatum HOM05D006004 ORTHO05D006976 3.1e-11 73.9 305 22.6
TPR.G2782 Trifolium pratense HOM05D006004 ORTHO05D006976 3.1e-11 73.9 265 25.3
CANSAT80G2410 Cannabis sativa HOM05D006004 ORTHO05D006976 7.0e-11 72.8 317 24.0
Psat4g044640 Pisum sativum HOM05D006004 ORTHO05D006976 2.0e-10 71.2 301 22.9
arahy.Tifrunner.gnm1.ann1.4WKV82 Arachis hypogaea HOM05D006004 ORTHO05D006976 4.5e-10 70.1 319 23.8
arahy.Tifrunner.gnm1.ann1.N2LMFJ Arachis hypogaea HOM05D006004 ORTHO05D006976 4.5e-10 70.1 319 23.8
MSTRG.9575 Avicennia marina HOM05D006004 ORTHO05D006976 1.0e-09 68.9 309 24.9
Hma1.2p1_0340F.1_g130130 Hydrangea macrophylla HOM05D006004 ORTHO05D006976 1.0e-09 68.9 305 21.6
Cc04_g07800 Coffea canephora HOM05D006004 ORTHO05D006976 1.3e-09 68.6 243 25.9
Lj9A434T79 Lonicera japonica HOM05D006004 ORTHO05D006976 1.7e-09 68.2 285 25.3
CARHR151070 Cardamine hirsuta HOM05D005635 ORTHO05D006838 2.9e-09 67.4 193 30.1
PSO782G5175 Papaver somniferum HOM05D006004 ORTHO05D006976 3.8e-09 67.0 306 21.6
Haze_18564 Corylus avellana HOM05D006004 ORTHO05D006976 8.5e-09 65.9 322 23.3
Atru.chr4.1499 Acer truncatum HOM05D005635 ORTHO05D006838 2.5e-08 64.3 44 70.5
Glyma.17G084300 Glycine max HOM05D006004 ORTHO05D006976 3.2e-08 63.9 306 23.2
Manes.05G116700 Manihot esculenta HOM05D006004 ORTHO05D006976 3.2e-08 63.9 236 25.0
VMungo1215G0559 Vigna mungo HOM05D006004 ORTHO05D006976 3.2e-08 63.9 306 22.9
Lalb_Chr07g0178481 Lupinus albus HOM05D006004 ORTHO05D006976 4.2e-08 63.5 318 22.6
Potri.014G182410 Populus trichocarpa HOM05D005635 ORTHO05D006838 4.2e-08 63.5 125 31.2
QL10p022090 Quercus lobata HOM05D006004 ORTHO05D006976 4.2e-08 63.5 293 23.2
Glyma.05G016000 Glycine max HOM05D006004 ORTHO05D006976 5.5e-08 63.2 299 22.4
Dinv38608 Davidia involucrata HOM05D006004 ORTHO05D006976 7.2e-08 62.8 310 21.9
Eucgr.K02642 Eucalyptus grandis HOM05D006004 ORTHO05D006976 7.2e-08 62.8 302 22.2
Aa31LG11G2560 Aethionema arabicum HOM05D006004 ORTHO05D006976 9.4e-08 62.4 243 24.7
Migut.D01490 Erythranthe guttata HOM05D006004 ORTHO05D006976 1.6e-07 61.6 302 23.2
Pp3c3_8190 Physcomitrium patens HOM05D006004 ORTHO05D006976 1.6e-07 61.6 293 24.9
Actinidia35066 Actinidia chinensis HOM05D006004 ORTHO05D006976 2.1e-07 61.2 318 23.6
Aqoxy3G00419 Aquilegia oxysepala HOM05D006004 ORTHO05D006976 2.1e-07 61.2 243 23.0
Carub.0006s2084 Capsella rubella HOM05D006004 ORTHO05D006976 2.1e-07 61.2 316 22.8
Nitab4.5_0000646g0210 Nicotiana tabacum HOM05D006004 ORTHO05D006976 2.1e-07 61.2 270 24.1
Nitab4.5_0004342g0050 Nicotiana tabacum HOM05D006004 ORTHO05D006976 2.1e-07 61.2 270 24.4
Solyc03g114450.3 Solanum lycopersicum HOM05D006004 ORTHO05D006976 2.1e-07 61.2 268 23.9
Sopen03g033550 Solanum pennellii HOM05D006004 ORTHO05D006976 2.1e-07 61.2 268 23.9
Thecc.03G091900 Theobroma cacao HOM05D006004 ORTHO05D006976 2.1e-07 61.2 271 23.2
Thecc.03G114100 Theobroma cacao HOM05D006004 ORTHO05D006976 2.1e-07 61.2 315 22.5
Aqoxy3G03831 Aquilegia oxysepala HOM05D006004 ORTHO05D006976 2.7e-07 60.8 303 23.4
Duzib068G1132 Durio zibethinus HOM05D006004 ORTHO05D006976 2.7e-07 60.8 247 24.3
ECA232G0726 Erigeron canadensis HOM05D006004 ORTHO05D006976 3.6e-07 60.5 304 22.4
PGSC0003DMG400024508 Solanum tuberosum HOM05D006004 ORTHO05D006976 3.6e-07 60.5 244 23.8
Prupe.5G213600 Prunus persica HOM05D006004 ORTHO05D006976 4.7e-07 60.1 205 26.3
BcaC09g49695 Brassica carinata HOM05D006004 ORTHO05D006976 6.1e-07 59.7 317 21.8
Medtr4g112530 Medicago truncatula HOM05D006004 ORTHO05D006976 6.1e-07 59.7 229 24.0
SEGI_01456 Sequoiadendron giganteum HOM05D006004 ORTHO05D006976 6.1e-07 59.7 222 26.6
CAN.G982.4 Capsicum annuum HOM05D006004 ORTHO05D006976 8.0e-07 59.3 259 23.9
Phvul.003G180100 Phaseolus vulgaris HOM05D006004 ORTHO05D006976 8.0e-07 59.3 306 22.2
RcHm_v2.0_Chr7g0184231 Rosa chinensis HOM05D006004 ORTHO05D006976 8.0e-07 59.3 262 22.9
Actinidia18955 Actinidia chinensis HOM05D006004 ORTHO05D006976 1.0e-06 58.9 312 23.4
ATR0752G115 Amborella trichopoda HOM05D006004 ORTHO05D006976 1.0e-06 58.9 262 23.3
Gohir.D07G061400 Gossypium hirsutum HOM05D006004 ORTHO05D006976 1.0e-06 58.9 246 23.6
PSO063G5123 Papaver somniferum HOM05D006004 ORTHO05D006976 1.0e-06 58.9 307 21.5
MD14G1219000 Malus domestica HOM05D006004 ORTHO05D006976 1.4e-06 58.5 205 26.3
Oeu031928.2 Olea europaea HOM05D006004 ORTHO05D006976 1.4e-06 58.5 246 22.4
AT5G23060 Arabidopsis thaliana HOM05D006004 ORTHO05D006976 1.8e-06 58.2 233 24.5
Dinv36862 Davidia involucrata HOM05D006004 ORTHO05D006976 1.8e-06 58.2 298 20.5
Thhalv10004373m.g Eutrema salsugineum HOM05D006004 ORTHO05D006976 3.0e-06 57.4 236 23.7
Gohir.A07G057100 Gossypium hirsutum HOM05D006004 ORTHO05D006976 3.0e-06 57.4 246 23.2
Potri.015G052200 Populus trichocarpa HOM05D006004 ORTHO05D006976 3.0e-06 57.4 251 23.1
BcaNung02628 Brassica carinata HOM05D006004 ORTHO05D006976 4.0e-06 57.0 236 23.3
C07p44490 Brassica napus HOM05D006004 ORTHO05D006976 4.0e-06 57.0 236 23.3
BolC7t44968H Brassica oleracea HOM05D006004 ORTHO05D006976 4.0e-06 57.0 236 23.3
Peaxi162Scf00017g03030 Petunia axillaris HOM05D006004 ORTHO05D006976 5.2e-06 56.6 202 24.8
SMO147G0273 Selaginella moellendorffii HOM05D006004 ORTHO05D006976 5.2e-06 56.6 313 24.3
Atru.chr9.693 Acer truncatum HOM05D006004 ORTHO05D006976 6.7e-06 56.2 236 24.6
AagrBONN_evm.TU.Sc2ySwM_340.20 Anthoceros agrestis HOM05D006004 ORTHO05D006976 6.7e-06 56.2 184 25.0
Pp3c14_1540 Physcomitrium patens HOM05D006004 ORTHO05D006976 6.7e-06 56.2 302 21.5
Pp3c2_19400 Physcomitrium patens HOM05D006004 ORTHO05D006976 6.7e-06 56.2 311 20.9
SalBow1G1782 Salvia bowleyana HOM05D006004 ORTHO05D006976 6.7e-06 56.2 192 25.0


User provided reference genes

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