Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu017115.1 Olea europaea HOM05D007191 ORTHO05D009370 2.7e-278 961.4 526 100.0
MSTRG.23388 Avicennia marina HOM05D007191 ORTHO05D009370 3.5e-116 422.9 380 57.6
Dinv36956 Davidia involucrata HOM05D007191 ORTHO05D009370 3.3e-114 416.4 386 55.7
Dinv13563 Davidia involucrata HOM05D007191 ORTHO05D009370 2.0e-111 407.1 381 56.7
Peaxi162Scf00085g00523 Petunia axillaris HOM05D007191 ORTHO05D009370 2.9e-110 403.3 330 60.3
Nitab4.5_0000402g0060 Nicotiana tabacum HOM05D007191 ORTHO05D009370 4.9e-110 402.5 352 59.1
CSS0046556 Camellia sinensis var. sinensis HOM05D007191 ORTHO05D009370 1.2e-108 397.9 327 62.1
Solyc11g010900.2 Solanum lycopersicum HOM05D007191 ORTHO05D009370 3.5e-108 396.4 336 58.0
QL06p036361 Quercus lobata HOM05D007191 ORTHO05D009370 6.0e-108 395.6 372 56.5
Sopen11g005640 Solanum pennellii HOM05D007191 ORTHO05D009370 7.9e-108 395.2 331 58.6
Actinidia25299 Actinidia chinensis HOM05D007191 ORTHO05D009370 2.3e-107 393.7 389 55.3
GSVIVG01003951001 Vitis vinifera HOM05D007191 ORTHO05D003232 6.2e-105 385.6 343 57.7
SalBow3G4077 Salvia bowleyana HOM05D007191 ORTHO05D009370 2.4e-104 383.6 391 54.2
Migut.H02278 Erythranthe guttata HOM05D007191 ORTHO05D009370 7.6e-103 378.6 390 51.8
Lsat_1_v5_gn_4_142441 Lactuca sativa HOM05D007191 ORTHO05D009370 7.6e-103 378.6 350 54.9
Manes.13G101800 Manihot esculenta HOM05D007191 ORTHO05D009370 1.7e-102 377.5 388 50.8
RcHm_v2.0_Chr2g0110691 Rosa chinensis HOM05D007191 ORTHO05D003232 2.2e-102 377.1 360 53.6
FvH4_1g19321 Fragaria vesca HOM05D007191 ORTHO05D009370 2.9e-102 376.7 336 56.8
Thecc.01G088100 Theobroma cacao HOM05D007191 ORTHO05D009370 6.4e-102 375.6 383 50.7
Manes.13G092280 Manihot esculenta HOM05D007191 ORTHO05D009370 1.1e-101 374.8 388 50.3
TWI74G0882 Tripterygium wilfordii HOM05D007191 ORTHO05D009370 1.4e-101 374.4 366 53.3
Atru.chr3.1215 Acer truncatum HOM05D007191 ORTHO05D009370 1.9e-101 374.0 382 52.1
COL.COLO4_27378 Corchorus olitorius HOM05D007191 ORTHO05D009370 2.4e-101 373.6 335 57.0
Prupe.6G204900 Prunus persica HOM05D007191 ORTHO05D009370 3.2e-101 373.2 335 56.7
Gohir.D11G215700 Gossypium hirsutum HOM05D007191 ORTHO05D009370 4.2e-101 372.9 382 50.3
MBI16_g30311_MAGBIO Magnolia biondii HOM05D007191 ORTHO05D009370 9.3e-101 371.7 325 60.6
Ciclev10025907m.g Citrus clementina HOM05D007191 ORTHO05D009370 1.6e-100 370.9 332 56.9
Gohir.A11G207400 Gossypium hirsutum HOM05D007191 ORTHO05D009370 2.7e-100 370.2 381 50.1
Gorai.007G232000 Gossypium raimondii HOM05D007191 ORTHO05D009370 2.7e-100 370.2 381 50.4
vmacro13023 Vaccinium macrocarpon HOM05D007191 ORTHO05D009370 6.0e-100 369.0 364 54.4
CiPaw.07G045700 Carya illinoinensis HOM05D007191 ORTHO05D009370 2.3e-99 367.1 338 55.6
MD01G1041100 Malus domestica HOM05D007191 ORTHO05D009370 6.7e-99 365.5 330 56.4
Medtr8g068220 Medicago truncatula HOM05D007191 ORTHO05D009370 6.7e-99 365.5 356 53.7
Nitab4.5_0005446g0010 Nicotiana tabacum HOM05D007191 ORTHO05D009370 6.7e-99 365.5 348 55.5
FAN19G0835 Fragaria x ananassa HOM05D007191 ORTHO05D000122 8.7e-99 365.2 332 56.6
Lj4g0026970 Lotus japonicus HOM05D007191 ORTHO05D009370 8.7e-99 365.2 324 58.0
Cpa.g.sc55.6 Carica papaya HOM05D007191 ORTHO05D009370 1.5e-98 364.4 377 52.3
Duzib147G1243 Durio zibethinus HOM05D007191 ORTHO05D009370 2.5e-98 363.6 359 50.7
FAN19G2137 Fragaria x ananassa HOM05D007191 ORTHO05D000122 4.3e-98 362.8 332 56.6
Potri.005G147600 Populus trichocarpa HOM05D007191 ORTHO05D009370 5.6e-98 362.5 337 57.3
A01p01070 Brassica napus HOM05D007191 ORTHO05D009370 2.1e-97 360.5 354 54.5
BraA01t00105Z Brassica rapa HOM05D007191 ORTHO05D009370 2.1e-97 360.5 354 54.5
BolC1t00117H Brassica oleracea HOM05D007191 ORTHO05D009370 3.7e-97 359.8 342 54.4
CANSAT01G2982 Cannabis sativa HOM05D007191 ORTHO05D009370 3.7e-97 359.8 357 52.9
Cfa006863 Carpinus fangiana HOM05D007191 ORTHO05D000122 3.7e-97 359.8 370 53.5
C01p01190 Brassica napus HOM05D007191 ORTHO05D009370 4.8e-97 359.4 342 54.4
Aqoxy6G01485 Aquilegia oxysepala HOM05D007191 ORTHO05D009370 6.2e-97 359.0 332 54.5
CsaV3_3G006990 Cucumis sativus L. HOM05D007191 ORTHO05D009370 8.1e-97 358.6 330 57.3
Lalb_Chr16g0392111 Lupinus albus HOM05D007191 ORTHO05D009370 8.1e-97 358.6 324 56.8
Eucgr.H02435 Eucalyptus grandis HOM05D007191 ORTHO05D009370 1.1e-96 358.2 382 50.0
BcaNung05371 Brassica carinata HOM05D007191 ORTHO05D009370 1.4e-96 357.8 343 54.5
BcaNung00953 Brassica carinata HOM05D007191 ORTHO05D009370 1.8e-96 357.5 342 54.1
TPR.G29816 Trifolium pratense HOM05D007191 ORTHO05D009370 4.0e-96 356.3 355 52.1
Carub.0007s0220 Capsella rubella HOM05D007191 ORTHO05D009370 6.9e-96 355.5 337 56.4
ClCG10G008240 Citrullus lanatus HOM05D007191 ORTHO05D009370 6.9e-96 355.5 334 56.3
MELO3C014951.2 Cucumis melo HOM05D007191 ORTHO05D009370 9.0e-96 355.1 330 57.0
Sabra05G0118000 Salix brachista HOM05D007191 ORTHO05D009370 3.4e-95 353.2 336 56.8
THA.LOC104804178 Tarenaya hassleriana HOM05D007191 ORTHO05D009370 4.5e-95 352.8 345 52.8
Ca_22623_v3 Cicer arietinum L. HOM05D007191 ORTHO05D009370 5.8e-95 352.4 324 56.5
Haze_03901 Corylus avellana HOM05D007191 ORTHO05D009370 5.8e-95 352.4 454 45.4
PSO675G0552 Papaver somniferum HOM05D007191 ORTHO05D009370 1.0e-94 351.7 357 51.0
arahy.Tifrunner.gnm1.ann1.DV4H7C Arachis hypogaea HOM05D007191 ORTHO05D009370 2.2e-94 350.5 324 56.2
Glyma.08G276900 Glycine max HOM05D007191 ORTHO05D009370 2.2e-94 350.5 324 55.9
AT4G38020 Arabidopsis thaliana HOM05D007191 ORTHO05D009370 2.9e-94 350.1 330 55.8
Thhalv10025567m.g Eutrema salsugineum HOM05D007191 ORTHO05D009370 3.8e-94 349.7 332 55.4
Sp7g35660 Schrenkiella parvula HOM05D007191 ORTHO05D009370 3.8e-94 349.7 331 55.6
AL7G12620 Arabidopsis lyrata HOM05D007191 ORTHO05D009370 1.1e-93 348.2 331 56.5
CARHR246430 Cardamine hirsuta HOM05D007191 ORTHO05D009370 1.9e-93 347.4 338 54.7
Psat4g117600 Pisum sativum HOM05D007191 ORTHO05D009370 1.9e-93 347.4 363 50.7
VMungo0251G2065 Vigna mungo HOM05D007191 ORTHO05D009370 4.2e-93 346.3 324 55.9
CDE04G1458 Ceratophyllum demersum HOM05D007191 ORTHO05D009370 7.1e-93 345.5 326 52.8
AUR62003688 Chenopodium quinoa HOM05D007191 ORTHO05D009370 2.1e-92 344.0 329 55.3
unitig_27.g25347 Utricularia gibba HOM05D007191 ORTHO05D009370 3.5e-92 343.2 372 49.5
PSO541G2681 Papaver somniferum HOM05D007191 ORTHO05D009370 4.6e-92 342.8 357 50.7
Phvul.003G287700 Phaseolus vulgaris HOM05D007191 ORTHO05D009370 1.0e-91 341.7 324 55.6
AUR62018000 Chenopodium quinoa HOM05D007191 ORTHO05D009370 8.7e-91 338.6 329 55.0
Aa31LG6G14960 Aethionema arabicum HOM05D007191 ORTHO05D009370 3.3e-90 336.7 381 47.8
HanXRQChr09g0259541 Helianthus annuus HOM05D007191 ORTHO05D009370 4.3e-90 336.3 328 53.0
SGA_v2.0_scaffold108G30936 Striga asiatica HOM05D007191 ORTHO05D009370 2.8e-89 333.6 362 49.2
CAN.G1771.10 Capsicum annuum HOM05D007191 ORTHO05D009370 8.2e-89 332.0 290 56.2
Ah.03g143260 Amaranthus hybridus HOM05D007191 ORTHO05D009370 5.3e-88 329.3 329 53.8
Sed0016887 Sechium edule HOM05D007191 ORTHO05D009370 3.8e-86 323.2 337 52.2
DCAR_003441 Daucus carota HOM05D007191 ORTHO05D003232 1.4e-85 321.2 291 56.4
Nn5g29827 Nelumbo nucifera HOM05D007191 ORTHO05D009370 5.5e-85 319.3 328 51.5
arahy.Tifrunner.gnm1.ann1.6T17AW Arachis hypogaea HOM05D007191 ORTHO05D009370 5.7e-82 309.3 324 52.2
PGSC0003DMG400016118 Solanum tuberosum HOM05D007191 ORTHO05D009370 2.5e-77 293.9 242 58.7
Os03g0685100 Oryza sativa ssp. japonica HOM05D007191 ORTHO05D009370 8.8e-75 285.4 387 42.4
Sc03g0000490 Simmondsia chinensis HOM05D007191 ORTHO05D009370 8.8e-75 285.4 313 50.5
Lj2A526T20 Lonicera japonica HOM05D007191 ORTHO05D009370 3.3e-74 283.5 341 48.7
ECA232G3284 Erigeron canadensis HOM05D000006 ORTHO05D000001 4.2e-69 266.5 290 49.3
HPP92_014152 Vanilla planifolia HOM05D007191 ORTHO05D009370 2.7e-68 263.8 334 45.5
HPP92_014172 Vanilla planifolia HOM05D007191 ORTHO05D009370 5.7e-66 256.1 348 42.8
Zm00001eb053350 Zea mays HOM05D007191 ORTHO05D009370 2.4e-64 250.8 300 43.7
SMO364G0498 Selaginella moellendorffii HOM05D007191 ORTHO05D009370 3.1e-64 250.4 343 40.8
Pp3c5_6200 Physcomitrium patens HOM05D007191 ORTHO05D009370 1.2e-60 238.4 349 39.5
CBR_g31860 Chara braunii HOM05D000601 ORTHO05D000407 1.9e-53 214.5 332 38.6
Mapoly0036s0111 Marchantia polymorpha HOM05D007191 ORTHO05D009370 2.7e-52 210.7 365 38.4
Cc00_g34880 Coffea canephora HOM05D007191 ORTHO05D009370 1.4e-48 198.4 155 62.6
AUR62043608 Chenopodium quinoa HOM05D007191 ORTHO05D009370 1.8e-48 198.0 186 54.3
Pp3c5_6210 Physcomitrium patens HOM05D007191 ORTHO05D009370 1.8e-43 181.4 268 38.1
PGR102G1719 Punica granatum HOM05D007191 ORTHO05D009370 3.0e-43 180.6 173 53.8
AUR62014153 Chenopodium quinoa HOM05D007191 ORTHO05D002709 1.5e-42 178.3 176 51.7
MCO07G132 Micromonas commoda HOM05D007191 ORTHO05D009370 6.6e-38 162.9 351 32.2
SEGI_38116 Sequoiadendron giganteum HOM05D007191 ORTHO05D009370 1.8e-32 144.8 162 46.9
Cre17.g744947 Chlamydomonas reinhardtii HOM05D007191 ORTHO05D009370 1.0e-30 139.0 424 27.6
SEGI_29034 Sequoiadendron giganteum HOM05D007191 ORTHO05D009370 2.1e-28 131.3 156 41.0
PRCOL_00003319 Prasinoderma coloniale HOM05D007191 ORTHO05D009370 1.4e-24 118.6 340 28.8
Cc07_g13860 Coffea canephora HOM05D007191 ORTHO05D009370 1.6e-20 105.1 117 50.4
Cc07_g13870 Coffea canephora HOM05D007191 ORTHO05D003232 2.1e-15 88.2 135 38.5
RcHm_v2.0_Chr6g0269301 Rosa chinensis HOM05D007191 ORTHO05D009370 3.9e-14 84.0 99 44.4
SalBow8G1474 Salvia bowleyana HOM05D000221 ORTHO05D359434 5.8e-10 70.1 69 52.2
Ca_28666_v3 Cicer arietinum L. HOM05D005801 ORTHO05D009370 7.6e-10 69.7 189 31.2
CSS0007107 Camellia sinensis var. sinensis HOM05D007191 ORTHO05D009370 3.2e-08 64.3 61 49.2
CSS0022959 Camellia sinensis var. sinensis HOM05D007191 ORTHO05D009370 3.2e-08 64.3 61 49.2


User provided reference genes

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