Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu017038.1 Olea europaea HOM05D001221 ORTHO05D009285 2.5e-78 295.8 202 100.0
Oeu030516.1 Olea europaea HOM05D001221 ORTHO05D009285 2.1e-13 80.1 68 61.8
Manes.09G103400 Manihot esculenta HOM05D001221 ORTHO05D009285 2.0e-11 73.6 62 59.7
Migut.J00190 Erythranthe guttata HOM05D001221 ORTHO05D009285 2.6e-11 73.2 49 73.5
MSTRG.19022 Avicennia marina HOM05D001221 ORTHO05D009285 7.6e-11 71.6 53 66.0
Glyma.08G119100 Glycine max HOM05D001221 ORTHO05D009285 1.3e-10 70.9 75 58.7
Sabra16G0108600 Salix brachista HOM05D001221 ORTHO05D009285 1.7e-10 70.5 62 56.5
DCAR_028823 Daucus carota HOM05D001221 ORTHO05D009285 2.2e-10 70.1 64 59.4
CAN.G703.5 Capsicum annuum HOM05D001221 ORTHO05D009285 2.9e-10 69.7 43 76.7
Nitab4.5_0000008g0890 Nicotiana tabacum HOM05D001221 ORTHO05D009285 2.9e-10 69.7 43 76.7
Nitab4.5_0011703g0010 Nicotiana tabacum HOM05D001221 ORTHO05D009285 2.9e-10 69.7 43 76.7
PGSC0003DMG400008495 Solanum tuberosum HOM05D001221 ORTHO05D009285 2.9e-10 69.7 43 76.7
TAR369G0855 Trochodendron aralioides HOM05D001221 ORTHO05D009285 2.9e-10 69.7 62 61.3
Prupe.6G272700 Prunus persica HOM05D001221 ORTHO05D009285 3.8e-10 69.3 62 59.7
Haze_03252 Corylus avellana HOM05D001221 ORTHO05D009285 5.0e-10 68.9 67 55.2
Rhsim05G0207300 Rhododendron simsii HOM05D001221 ORTHO05D009285 5.0e-10 68.9 62 62.9
Cfa010721 Carpinus fangiana HOM05D001221 ORTHO05D009285 6.5e-10 68.6 64 56.2
SGA_v2.0_scaffold85G26754 Striga asiatica HOM05D001221 ORTHO05D009285 6.5e-10 68.6 53 66.0
Lsat_1_v5_gn_9_35920 Lactuca sativa HOM05D001221 ORTHO05D009285 8.4e-10 68.2 55 65.5
Actinidia13771 Actinidia chinensis HOM05D001221 ORTHO05D009285 1.1e-09 67.8 62 61.3
Potri.016G112900 Populus trichocarpa HOM05D001221 ORTHO05D009285 1.1e-09 67.8 62 56.5
MD04G1148400 Malus domestica HOM05D001221 ORTHO05D009285 1.4e-09 67.4 62 58.1
MD12G1162000 Malus domestica HOM05D001221 ORTHO05D009285 1.4e-09 67.4 62 58.1
PGR042G0922 Punica granatum HOM05D001221 ORTHO05D009285 1.4e-09 67.4 62 61.3
Sopen09g007240 Solanum pennellii HOM05D001221 ORTHO05D009285 1.9e-09 67.0 43 72.1
unitig_27.g24844 Utricularia gibba HOM05D001221 ORTHO05D009285 1.9e-09 67.0 62 53.2
FAN02G1926 Fragaria x ananassa HOM05D001221 ORTHO05D009285 3.2e-09 66.2 60 58.3
Lj2C77T2 Lonicera japonica HOM05D001221 ORTHO05D009285 3.2e-09 66.2 67 53.7
Nitab4.5_0003567g0110 Nicotiana tabacum HOM05D001221 ORTHO05D009285 3.2e-09 66.2 42 76.2
PSO384G2279 Papaver somniferum HOM05D001221 ORTHO05D009285 3.2e-09 66.2 67 55.2
Ciclev10011651m.g Citrus clementina HOM05D001221 ORTHO05D009285 5.5e-09 65.5 62 56.5
Ca_08338_v3 Cicer arietinum L. HOM05D001221 ORTHO05D009285 7.1e-09 65.1 55 65.5
FvH4_6g11860 Fragaria vesca HOM05D001221 ORTHO05D009285 7.1e-09 65.1 60 56.7
FAN14G4172 Fragaria x ananassa HOM05D001221 ORTHO05D009285 7.1e-09 65.1 60 56.7
FAN14G5805 Fragaria x ananassa HOM05D001221 ORTHO05D009285 7.1e-09 65.1 60 56.7
Lj3g0014679 Lotus japonicus HOM05D001221 ORTHO05D009285 7.1e-09 65.1 55 65.5
GSVIVG01033992001 Vitis vinifera HOM05D001221 ORTHO05D009285 7.1e-09 65.1 55 65.5
Gohir.D06G183400 Gossypium hirsutum HOM05D001221 ORTHO05D009285 9.3e-09 64.7 64 53.1
Gorai.010G214400 Gossypium raimondii HOM05D001221 ORTHO05D009285 9.3e-09 64.7 64 53.1
Lalb_Chr07g0193891 Lupinus albus HOM05D001221 ORTHO05D009285 9.3e-09 64.7 55 63.6
Medtr7g088170 Medicago truncatula HOM05D001221 ORTHO05D009285 9.3e-09 64.7 55 65.5
CSS0000018 Camellia sinensis var. sinensis HOM05D001221 ORTHO05D009285 1.2e-08 64.3 57 63.2
CSS0034566 Camellia sinensis var. sinensis HOM05D001221 ORTHO05D009285 1.2e-08 64.3 57 63.2
FAN05G4573 Fragaria x ananassa HOM05D001221 ORTHO05D009285 1.2e-08 64.3 60 56.7
TPR.G23659 Trifolium pratense HOM05D001221 ORTHO05D009285 1.2e-08 64.3 60 63.3
ECA247G4014 Erigeron canadensis HOM05D001221 ORTHO05D009285 1.6e-08 63.9 55 63.6
RcHm_v2.0_Chr3g0463601 Rosa chinensis HOM05D001221 ORTHO05D009285 1.6e-08 63.9 60 56.7
Sed0009696 Sechium edule HOM05D001221 ORTHO05D009285 1.6e-08 63.9 54 64.8
Actinidia29122 Actinidia chinensis HOM05D001221 ORTHO05D009285 2.1e-08 63.5 62 56.5
Gohir.A06G173400 Gossypium hirsutum HOM05D001221 ORTHO05D009285 2.1e-08 63.5 53 58.5
Atru.chr8.2211 Acer truncatum HOM05D001221 ORTHO05D009285 2.7e-08 63.2 60 58.3
COL.COLO4_02741 Corchorus olitorius HOM05D001221 ORTHO05D009285 4.6e-08 62.4 56 60.7
Phvul.002G155200 Phaseolus vulgaris HOM05D001221 ORTHO05D009285 4.6e-08 62.4 55 61.8
Psat3g083200 Pisum sativum HOM05D001221 ORTHO05D009285 4.6e-08 62.4 55 63.6
VMungo1215G0061 Vigna mungo HOM05D001221 ORTHO05D009285 4.6e-08 62.4 55 61.8
Nn2g14026 Nelumbo nucifera HOM05D001221 ORTHO05D009285 6.1e-08 62.0 55 61.8
CsaV3_4G026220 Cucumis sativus L. HOM05D001221 ORTHO05D009285 7.9e-08 61.6 55 63.6
TWI60G0701 Tripterygium wilfordii HOM05D001221 ORTHO05D009285 7.9e-08 61.6 64 53.1
Cc00_g18170 Coffea canephora HOM05D001221 ORTHO05D009285 1.0e-07 61.2 71 53.5
Cc00_g18180 Coffea canephora HOM05D001221 ORTHO05D009285 1.0e-07 61.2 71 53.5
TWI34G0521 Tripterygium wilfordii HOM05D001221 ORTHO05D009285 1.0e-07 61.2 62 51.6
Cpa.g.sc106.33 Carica papaya HOM05D001221 ORTHO05D009285 1.8e-07 60.5 64 53.1
Dinv37071 Davidia involucrata HOM05D001221 ORTHO05D009285 2.3e-07 60.1 55 60.0
Thecc.10G136500 Theobroma cacao HOM05D001221 ORTHO05D009285 2.3e-07 60.1 56 58.9
CiPaw.09G207400 Carya illinoinensis HOM05D001221 ORTHO05D009285 3.0e-07 59.7 55 58.2
ClCG04G007050 Citrullus lanatus HOM05D001221 ORTHO05D009285 3.0e-07 59.7 67 55.2
MELO3C003302.2 Cucumis melo HOM05D001221 ORTHO05D009285 3.0e-07 59.7 55 61.8
Aqoxy2G03089 Aquilegia oxysepala HOM05D001221 ORTHO05D009285 2.5e-06 56.6 54 55.6
SHI12823 Sapria himalayana HOM05D001221 ORTHO05D009285 9.7e-06 54.7 61 45.9


User provided reference genes

Program Settings