Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu016993.1 Olea europaea HOM05D005766 ORTHO05D007002 3.6e-28 127.5 62 100.0
Oeu044897.1 Olea europaea HOM05D005766 ORTHO05D007002 1.5e-26 122.1 62 96.8
Oeu023563.1 Olea europaea HOM05D005766 ORTHO05D007002 1.8e-24 115.2 62 91.9
Hund04814 Selenicereus undatus HOM05D005766 ORTHO05D007002 8.1e-12 73.2 87 44.8
Migut.F00259 Erythranthe guttata HOM05D005766 ORTHO05D007002 1.4e-11 72.4 87 44.8
Lsat_1_v5_gn_2_61121 Lactuca sativa HOM05D005766 ORTHO05D007002 1.8e-11 72.0 87 44.8
SGA_v2.0_scaffold192G40599 Striga asiatica HOM05D005766 ORTHO05D007002 1.8e-11 72.0 87 46.0
Ah.07g206240 Amaranthus hybridus HOM05D005766 ORTHO05D007002 3.1e-11 71.2 87 44.8
AUR62031455 Chenopodium quinoa HOM05D000038 ORTHO05D007763 3.1e-11 71.2 87 43.7
Cpa.g.sc3.14 Carica papaya HOM05D005766 ORTHO05D007002 5.2e-11 70.5 88 44.3
AUR62021076 Chenopodium quinoa HOM05D005766 ORTHO05D007002 8.9e-11 69.7 87 42.5
Atru.chr1.316 Acer truncatum HOM05D005766 ORTHO05D007002 1.2e-10 69.3 88 45.5
Haze_00083 Corylus avellana HOM05D005766 ORTHO05D007002 1.2e-10 69.3 88 44.3
FAN01G0765 Fragaria x ananassa HOM05D005766 ORTHO05D007002 1.2e-10 69.3 88 44.3
HanXRQChr14g0440221 Helianthus annuus HOM05D005766 ORTHO05D007002 1.2e-10 69.3 87 42.5
FvH4_7g30700 Fragaria vesca HOM05D005766 ORTHO05D007002 1.5e-10 68.9 88 44.3
FAN03G2278 Fragaria x ananassa HOM05D005766 ORTHO05D007002 1.5e-10 68.9 88 44.3
FAN06G1885 Fragaria x ananassa HOM05D005766 ORTHO05D007002 1.5e-10 68.9 88 44.3
FAN06G2288 Fragaria x ananassa HOM05D005766 ORTHO05D007002 1.5e-10 68.9 88 44.3
FAN10G0167 Fragaria x ananassa HOM05D005766 ORTHO05D007002 1.5e-10 68.9 88 44.3
FAN10G3945 Fragaria x ananassa HOM05D005766 ORTHO05D007002 1.5e-10 68.9 88 44.3
Hma1.2p1_0327F.1_g126600 Hydrangea macrophylla HOM05D005766 ORTHO05D007002 1.5e-10 68.9 88 45.5
vmacro06594 Vaccinium macrocarpon HOM05D005766 ORTHO05D007002 1.5e-10 68.9 88 44.3
TAR629G2087 Trochodendron aralioides HOM05D005766 ORTHO05D007002 2.0e-10 68.6 88 45.5
Ciclev10004767m.g Citrus clementina HOM05D005766 ORTHO05D007002 2.6e-10 68.2 87 42.5
Manes.14G020100 Manihot esculenta HOM05D005766 ORTHO05D007002 2.6e-10 68.2 88 44.3
QL11p056568 Quercus lobata HOM05D005766 ORTHO05D007002 2.6e-10 68.2 88 44.3
SalBow4G0986 Salvia bowleyana HOM05D005766 ORTHO05D007002 3.4e-10 67.8 86 43.0
Sc13g0009390 Simmondsia chinensis HOM05D005766 ORTHO05D007002 3.4e-10 67.8 87 41.4
Rhsim03G0196600 Rhododendron simsii HOM05D005766 ORTHO05D007002 4.4e-10 67.4 88 43.2
Cc02_g02130 Coffea canephora HOM05D005766 ORTHO05D007002 5.8e-10 67.0 86 41.9
GSVIVG01028775001 Vitis vinifera HOM05D005766 ORTHO05D007002 5.8e-10 67.0 88 44.3
MELO3C006963.2 Cucumis melo HOM05D005766 ORTHO05D007002 7.5e-10 66.6 88 43.2
CsaV3_3G021770 Cucumis sativus L. HOM05D005766 ORTHO05D007002 7.5e-10 66.6 88 43.2
PGR004G1861 Punica granatum HOM05D005766 ORTHO05D007002 7.5e-10 66.6 89 43.8
Cfa016332 Carpinus fangiana HOM05D005766 ORTHO05D007002 9.8e-10 66.2 88 43.2
Sed0015140 Sechium edule HOM05D005766 ORTHO05D007002 9.8e-10 66.2 88 42.0
Lj1A1010T47 Lonicera japonica HOM05D005766 ORTHO05D007002 1.3e-09 65.9 87 41.4
CSS0024367 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 1.7e-09 65.5 88 40.9
CSS0041625 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 1.7e-09 65.5 88 40.9
Nitab4.5_0001504g0110 Nicotiana tabacum HOM05D005766 ORTHO05D007002 1.7e-09 65.5 87 40.2
RcHm_v2.0_Chr1g0379651 Rosa chinensis HOM05D005766 ORTHO05D007002 1.7e-09 65.5 88 42.0
unitig_37.g11976 Utricularia gibba HOM05D005766 ORTHO05D007002 1.7e-09 65.5 87 46.0
Gohir.A12G254600 Gossypium hirsutum HOM05D005766 ORTHO05D007002 2.2e-09 65.1 88 42.0
Gohir.D12G254700 Gossypium hirsutum HOM05D005766 ORTHO05D007002 2.2e-09 65.1 88 42.0
TWI39G0494 Tripterygium wilfordii HOM05D005766 ORTHO05D007002 2.2e-09 65.1 88 44.3
PSO170G0163 Papaver somniferum HOM05D005766 ORTHO05D007002 2.9e-09 64.7 88 43.2
ClCG05G008560 Citrullus lanatus HOM05D005766 ORTHO05D007002 3.7e-09 64.3 88 42.0
Nn1g01746 Nelumbo nucifera HOM05D005766 ORTHO05D007002 3.7e-09 64.3 88 40.9
Thecc.03G188900 Theobroma cacao HOM05D005766 ORTHO05D007002 3.7e-09 64.3 88 40.9
MD07G1282600 Malus domestica HOM05D005766 ORTHO05D007002 6.4e-09 63.5 88 40.9
Duzib205G0439 Durio zibethinus HOM05D005766 ORTHO05D007002 8.3e-09 63.2 88 40.9
Prupe.2G304700 Prunus persica HOM05D005766 ORTHO05D007002 8.3e-09 63.2 88 42.0
SEGI_39054 Sequoiadendron giganteum HOM05D005766 ORTHO05D007002 8.3e-09 63.2 88 43.2
Gorai.008G272400 Gossypium raimondii HOM05D005766 ORTHO05D007002 1.1e-08 62.8 88 40.9
PGSC0003DMG400006615 Solanum tuberosum HOM05D005766 ORTHO05D007002 1.1e-08 62.8 87 39.1
Sabra15G0019200 Salix brachista HOM05D005766 ORTHO05D007002 2.4e-08 61.6 88 39.8
Sabra15G0021700 Salix brachista HOM05D005766 ORTHO05D007002 2.4e-08 61.6 88 39.8
Solyc12g021310.3 Solanum lycopersicum HOM05D005766 ORTHO05D007002 2.4e-08 61.6 87 37.9
Sopen12g011330 Solanum pennellii HOM05D005766 ORTHO05D007002 2.4e-08 61.6 87 37.9
Potri.015G026100 Populus trichocarpa HOM05D005766 ORTHO05D007002 3.2e-08 61.2 88 39.8
CANSAT21G0601 Cannabis sativa HOM05D005766 ORTHO05D007002 4.1e-08 60.8 88 40.9
ATR1131G022 Amborella trichopoda HOM05D005766 ORTHO05D007002 9.2e-08 59.7 88 37.5
arahy.Tifrunner.gnm1.ann1.M1FPNI Arachis hypogaea HOM05D005766 ORTHO05D007002 1.6e-07 58.9 88 38.6
DCAR_008901 Daucus carota HOM05D000149 ORTHO05D000076 2.1e-07 58.5 84 36.9
CAN.G71.5 Capsicum annuum HOM05D005766 ORTHO05D007002 3.5e-07 57.8 87 36.8
Duzib084G0599 Durio zibethinus HOM05D005766 ORTHO05D007002 3.5e-07 57.8 90 38.9
Zm00001eb221900 Zea mays HOM05D005766 ORTHO05D007002 4.6e-07 57.4 88 36.4
arahy.Tifrunner.gnm1.ann1.8957SA Arachis hypogaea HOM05D005766 ORTHO05D007002 6.0e-07 57.0 88 38.6
MD01G1212200 Malus domestica HOM05D005766 ORTHO05D007002 7.8e-07 56.6 85 38.8
Os05g0299300 Oryza sativa ssp. japonica HOM05D005766 ORTHO05D007002 7.8e-07 56.6 88 37.5
Glyma.20G164300 Glycine max HOM05D005766 ORTHO05D007002 1.0e-06 56.2 88 39.8
MBI07_g26934_MAGBIO Magnolia biondii HOM05D005766 ORTHO05D007002 1.7e-06 55.5 78 39.7
Ca_10701_v3 Cicer arietinum L. HOM05D005766 ORTHO05D007002 5.1e-06 53.9 88 36.4
Glyma.18G131400 Glycine max HOM05D005766 ORTHO05D007002 5.1e-06 53.9 88 38.6
Lalb_Chr06g0161401 Lupinus albus HOM05D005766 ORTHO05D007002 5.1e-06 53.9 87 36.8
Glyma.10G228700 Glycine max HOM05D005766 ORTHO05D007002 8.6e-06 53.1 87 36.8


User provided reference genes

Program Settings