Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu016936.1 Olea europaea HOM05D008403 ORTHO05D010317 3.1e-99 365.2 185 100.0
Oeu017922.1 Olea europaea HOM05D008403 ORTHO05D010317 8.5e-49 197.6 136 72.8
CSS0029866 Camellia sinensis var. sinensis HOM05D008403 ORTHO05D010317 2.2e-33 146.4 184 43.5
Oeu002789.2 Olea europaea HOM05D008403 ORTHO05D010317 3.8e-33 145.6 150 51.3
Aqoxy4G02379 Aquilegia oxysepala HOM05D008403 ORTHO05D010317 5.7e-29 131.7 178 40.4
QL05p066293 Quercus lobata HOM05D008403 ORTHO05D010317 1.3e-28 130.6 184 40.2
Migut.F01664 Erythranthe guttata HOM05D008403 ORTHO05D010317 4.8e-28 128.6 181 41.4
Rhsim02G0087900 Rhododendron simsii HOM05D008403 ORTHO05D010317 4.8e-28 128.6 151 44.4
Duzib268G1784 Durio zibethinus HOM05D008403 ORTHO05D010317 7.0e-27 124.8 173 43.4
Migut.M01476 Erythranthe guttata HOM05D008403 ORTHO05D010317 1.2e-26 124.0 182 38.5
SGA_v2.0_scaffold186G40151 Striga asiatica HOM05D008403 ORTHO05D010317 2.0e-26 123.2 154 40.3
PGR004G1348 Punica granatum HOM05D008403 ORTHO05D010317 2.6e-26 122.9 174 39.7
Cpa.g.sc27.190 Carica papaya HOM05D008403 ORTHO05D010317 8.5e-25 117.9 173 42.2
COL.COLO4_27522 Corchorus olitorius HOM05D008403 ORTHO05D010317 8.5e-25 117.9 174 40.8
Sabra08G0008100 Salix brachista HOM05D008403 ORTHO05D010317 8.5e-25 117.9 176 38.6
SGA_v2.0_scaffold7G03659 Striga asiatica HOM05D008403 ORTHO05D010317 1.9e-24 116.7 180 36.1
CANSAT56G1928 Cannabis sativa HOM05D008403 ORTHO05D010317 3.2e-24 115.9 156 39.1
Potri.016G001600 Populus trichocarpa HOM05D008403 ORTHO05D010317 3.2e-24 115.9 151 39.7
Eucgr.D00968 Eucalyptus grandis HOM05D008403 ORTHO05D010317 4.2e-24 115.5 184 40.2
Lj6g0020324 Lotus japonicus HOM05D008403 ORTHO05D010317 1.2e-23 114.0 173 38.2
QL05p066264 Quercus lobata HOM05D008403 ORTHO05D010317 1.6e-23 113.6 180 35.6
FvH4_3g00110 Fragaria vesca HOM05D008403 ORTHO05D010317 4.7e-23 112.1 180 38.9
RcHm_v2.0_Chr5g0000141 Rosa chinensis HOM05D008403 ORTHO05D010317 4.7e-23 112.1 173 39.3
Atru.chr2.423 Acer truncatum HOM05D008403 ORTHO05D010317 8.0e-23 111.3 149 44.3
FAN25G0691 Fragaria x ananassa HOM05D000186 ORTHO05D001124 3.0e-22 109.4 178 37.6
Prupe.4G001200 Prunus persica HOM05D008403 ORTHO05D010317 8.8e-22 107.8 172 36.0
TWI31G1421 Tripterygium wilfordii HOM05D008403 ORTHO05D010317 1.2e-21 107.5 176 39.2
Atru.chr2.427 Acer truncatum HOM05D008403 ORTHO05D010317 1.5e-21 107.1 149 43.0
CiPaw.09G112600 Carya illinoinensis HOM05D008403 ORTHO05D010317 1.5e-21 107.1 178 37.6
Manes.08G015200 Manihot esculenta HOM05D008403 ORTHO05D010317 2.0e-21 106.7 173 35.8
Rhsim02G0088000 Rhododendron simsii HOM05D008403 ORTHO05D010317 3.3e-21 105.9 176 38.1
Potri.008G013400 Populus trichocarpa HOM05D008403 ORTHO05D010317 4.4e-21 105.5 183 35.5
SGA_v2.0_scaffold186G40153 Striga asiatica HOM05D008403 ORTHO05D010317 4.4e-21 105.5 160 38.8
Atru.chr1.2232 Acer truncatum HOM05D008403 ORTHO05D010317 5.7e-21 105.1 149 40.9
Atru.chr2.1377 Acer truncatum HOM05D008403 ORTHO05D010317 5.7e-21 105.1 172 36.0
CiPaw.08G030100 Carya illinoinensis HOM05D008403 ORTHO05D010317 1.3e-20 104.0 154 39.6
Ciclev10017450m.g Citrus clementina HOM05D008403 ORTHO05D010317 1.4e-19 100.5 134 41.8
PSO675G4416 Papaver somniferum HOM05D008403 ORTHO05D010317 1.4e-19 100.5 172 36.6
TAR627G0716 Trochodendron aralioides HOM05D008403 ORTHO05D010317 1.4e-19 100.5 152 38.2
PSO541G3674 Papaver somniferum HOM05D008403 ORTHO05D010317 4.1e-19 99.0 156 38.5
PGR004G1501 Punica granatum HOM05D008403 ORTHO05D010317 2.0e-18 96.7 189 31.7
Actinidia04549 Actinidia chinensis HOM05D008403 ORTHO05D010317 4.5e-18 95.5 148 39.2
MBI18_g04557_MAGBIO Magnolia biondii HOM05D008403 ORTHO05D010317 2.9e-17 92.8 141 39.7
PSO732G0092 Papaver somniferum HOM05D008403 ORTHO05D010317 3.2e-16 89.4 155 36.1
Lalb_Chr20g0119681 Lupinus albus HOM05D008403 ORTHO05D010317 1.2e-15 87.4 171 35.1
PSO675G0961 Papaver somniferum HOM05D008403 ORTHO05D010317 3.6e-15 85.9 177 33.9
PSO732G0094 Papaver somniferum HOM05D008403 ORTHO05D010317 1.4e-14 84.0 177 33.9
PSO732G0610 Papaver somniferum HOM05D008403 ORTHO05D010317 1.4e-14 84.0 156 35.3
TAR627G0317 Trochodendron aralioides HOM05D008403 ORTHO05D010317 6.8e-14 81.6 184 31.5
PSO732G0597 Papaver somniferum HOM05D008403 ORTHO05D010317 3.4e-13 79.3 156 34.0
MBI09_g02146_MAGBIO Magnolia biondii HOM05D001578 ORTHO05D001207 5.7e-13 78.6 164 32.3
PSO732G0418 Papaver somniferum HOM05D008403 ORTHO05D010317 9.8e-13 77.8 177 33.9
Psat4g219240 Pisum sativum HOM05D001445 ORTHO05D001261 9.8e-13 77.8 184 31.0
MBI07_g43317_MAGBIO Magnolia biondii HOM05D011459 ORTHO05D001261 1.7e-12 77.0 154 33.1
MBI09_g01820_MAGBIO Magnolia biondii HOM05D001578 ORTHO05D001207 4.8e-12 75.5 163 31.3
MBI09_g40718_MAGBIO Magnolia biondii HOM05D001578 ORTHO05D001207 6.3e-12 75.1 163 32.5
SGA_v2.0_scaffold47G17718 Striga asiatica HOM05D008403 ORTHO05D010317 6.3e-12 75.1 162 32.7
Nn1g08310 Nelumbo nucifera HOM05D008403 ORTHO05D010317 8.3e-12 74.7 152 30.9
Gohir.A06G202800 Gossypium hirsutum HOM05D014554 ORTHO05D010317 2.4e-11 73.2 175 28.6
Gohir.D06G218900 Gossypium hirsutum HOM05D014554 ORTHO05D010317 7.0e-11 71.6 175 28.6
Thecc.04G304700 Theobroma cacao HOM05D001578 ORTHO05D001207 7.0e-11 71.6 166 27.7
Gorai.010G247400 Gossypium raimondii HOM05D014554 ORTHO05D010317 9.1e-11 71.2 175 28.6
Potri.001G127500 Populus trichocarpa HOM05D003556 ORTHO05D003404 9.1e-11 71.2 175 32.6
TAR627G0557 Trochodendron aralioides HOM05D008403 ORTHO05D010317 1.2e-10 70.9 183 32.2
Dinv28905 Davidia involucrata HOM05D001445 ORTHO05D001261 1.6e-10 70.5 178 28.7
RcHm_v2.0_Chr4g0425861 Rosa chinensis HOM05D001578 ORTHO05D001207 1.6e-10 70.5 148 26.4
Duzib151G1057 Durio zibethinus HOM05D001578 ORTHO05D001207 2.7e-10 69.7 156 28.2
Lj6g0019770 Lotus japonicus HOM05D000001 ORTHO05D010775 4.5e-10 68.9 76 43.4
Manes.15G002100 Manihot esculenta HOM05D001578 ORTHO05D001207 5.9e-10 68.6 182 30.2
Prupe.1G114500 Prunus persica HOM05D001578 ORTHO05D001207 7.7e-10 68.2 172 29.1
Thecc.01G402600 Theobroma cacao HOM05D001445 ORTHO05D001261 1.0e-09 67.8 175 30.9
Medtr4g122890 Medicago truncatula HOM05D001578 ORTHO05D001207 1.7e-09 67.0 169 30.2
Thecc.06G243800 Theobroma cacao HOM05D014554 ORTHO05D010317 1.7e-09 67.0 173 27.2
Cfa002816 Carpinus fangiana HOM05D004113 ORTHO05D005233 2.3e-09 66.6 170 30.0
Thhalv10011825m.g Eutrema salsugineum HOM05D001578 ORTHO05D001207 2.3e-09 66.6 154 28.6
TPR.G25429 Trifolium pratense HOM05D001578 ORTHO05D001207 2.3e-09 66.6 169 27.2
RhsimUnG0017500 Rhododendron simsii HOM05D004113 ORTHO05D005233 2.9e-09 66.2 171 28.1
Carub.0001s3704 Capsella rubella HOM05D001578 ORTHO05D001207 3.8e-09 65.9 150 28.7
Carub.0008s2541 Capsella rubella HOM05D004113 ORTHO05D005233 3.8e-09 65.9 172 30.2
Haze_17791 Corylus avellana HOM05D004894 ORTHO05D009560 3.8e-09 65.9 160 29.4
MD06G1041900 Malus domestica HOM05D001445 ORTHO05D001261 3.8e-09 65.9 190 31.1
Actinidia18484 Actinidia chinensis HOM05D003146 ORTHO05D001819 6.5e-09 65.1 155 30.3
MD13G1150200 Malus domestica HOM05D001578 ORTHO05D001207 6.5e-09 65.1 173 31.2
Nn3g20356 Nelumbo nucifera HOM05D003146 ORTHO05D001819 6.5e-09 65.1 157 30.6
TPR.G25407 Trifolium pratense HOM05D001578 ORTHO05D001207 6.5e-09 65.1 156 30.1
SHI15103 Sapria himalayana HOM05D003556 ORTHO05D003404 8.6e-09 64.7 173 28.3
TPR.G25401 Trifolium pratense HOM05D001578 ORTHO05D001207 8.6e-09 64.7 162 29.0
RhsimUnG0133000 Rhododendron simsii HOM05D004113 ORTHO05D005233 1.1e-08 64.3 172 28.5
AL1G54460 Arabidopsis lyrata HOM05D001578 ORTHO05D001207 1.5e-08 63.9 150 28.0
Cpa.g.sc9.25 Carica papaya HOM05D001578 ORTHO05D001207 1.5e-08 63.9 170 28.8
Rhsim07G0095800 Rhododendron simsii HOM05D003146 ORTHO05D001819 1.5e-08 63.9 183 30.6
Actinidia19773 Actinidia chinensis HOM05D003556 ORTHO05D003404 1.9e-08 63.5 151 24.5
MD13G1150400 Malus domestica HOM05D001578 ORTHO05D001207 2.5e-08 63.2 169 29.0
MELO3C006266.2 Cucumis melo HOM05D001445 ORTHO05D001261 3.2e-08 62.8 161 24.2
Medtr4g122760 Medicago truncatula HOM05D001578 ORTHO05D001207 3.2e-08 62.8 159 30.2
Oeu024391.1 Olea europaea HOM05D001445 ORTHO05D001261 3.2e-08 62.8 174 27.6
THA.LOC104824471 Tarenaya hassleriana HOM05D001445 ORTHO05D001261 3.2e-08 62.8 177 31.1
vmacro07979 Vaccinium macrocarpon HOM05D003146 ORTHO05D001819 3.2e-08 62.8 135 29.6
AT1G47960 Arabidopsis thaliana HOM05D001578 ORTHO05D001207 4.2e-08 62.4 150 27.3
AUR62025289 Chenopodium quinoa HOM05D001445 ORTHO05D001261 4.2e-08 62.4 163 28.8
CsaV3_4G000950 Cucumis sativus L. HOM05D003556 ORTHO05D003404 4.2e-08 62.4 175 22.9
Dinv25174 Davidia involucrata HOM05D001445 ORTHO05D001261 4.2e-08 62.4 157 29.3
FvH4_4g20180 Fragaria vesca HOM05D001578 ORTHO05D001207 4.2e-08 62.4 149 25.5
FAN12G2195 Fragaria x ananassa HOM05D001578 ORTHO05D001207 4.2e-08 62.4 149 25.5
FAN07G0539 Fragaria x ananassa HOM05D001578 ORTHO05D001207 7.2e-08 61.6 149 25.5
Ciclev10002638m.g Citrus clementina HOM05D004894 ORTHO05D005689 1.2e-07 60.8 132 29.5
Dinv19674 Davidia involucrata HOM05D003556 ORTHO05D003404 1.2e-07 60.8 142 26.8
FvH4_5g20950 Fragaria vesca HOM05D001445 ORTHO05D001261 1.2e-07 60.8 189 28.0
MBI07_g46097_MAGBIO Magnolia biondii HOM05D011459 ORTHO05D013640 1.2e-07 60.8 139 30.2
CAN.G572.46 Capsicum annuum HOM05D001445 ORTHO05D001261 1.6e-07 60.5 176 31.2
Nn3g21538 Nelumbo nucifera HOM05D003556 ORTHO05D003404 1.6e-07 60.5 134 26.1
PSO832G2602 Papaver somniferum HOM05D003556 ORTHO05D003404 1.6e-07 60.5 171 25.7
QL12p007390 Quercus lobata HOM05D001445 ORTHO05D001261 1.6e-07 60.5 184 27.7
AL6G50890 Arabidopsis lyrata HOM05D003556 ORTHO05D003404 2.1e-07 60.1 180 22.8
Cpa.g.sc48.109 Carica papaya HOM05D003556 ORTHO05D003404 2.1e-07 60.1 173 28.9
HanXRQChr08g0218241 Helianthus annuus HOM05D004113 ORTHO05D005233 2.1e-07 60.1 142 28.2
MSTRG.4961 Avicennia marina HOM05D001445 ORTHO05D001261 2.8e-07 59.7 135 29.6
QL04p026153 Quercus lobata HOM05D001445 ORTHO05D001261 2.8e-07 59.7 171 27.5
Sed0005894 Sechium edule HOM05D001445 ORTHO05D001261 2.8e-07 59.7 157 24.8
TAR362G0992 Trochodendron aralioides HOM05D003556 ORTHO05D003404 2.8e-07 59.7 149 24.8
TWI23G0284 Tripterygium wilfordii HOM05D003556 ORTHO05D003404 3.6e-07 59.3 168 26.8
Haze_01334 Corylus avellana HOM05D001578 ORTHO05D001207 4.7e-07 58.9 160 28.1
Migut.O00479 Erythranthe guttata HOM05D022792 ORTHO05D001819 4.7e-07 58.9 176 27.3
Glyma.20G028900 Glycine max HOM05D001578 ORTHO05D001207 4.7e-07 58.9 149 28.2
Glyma.20G029700 Glycine max HOM05D001578 ORTHO05D001207 4.7e-07 58.9 145 26.9
Hma1.2p1_0078F.1_g039850 Hydrangea macrophylla HOM05D001578 ORTHO05D001207 4.7e-07 58.9 171 26.9
Hma1.2p1_1400F.1_g280915 Hydrangea macrophylla HOM05D001578 ORTHO05D001207 4.7e-07 58.9 171 26.9
Manes.03G207000 Manihot esculenta HOM05D001578 ORTHO05D001207 4.7e-07 58.9 153 26.1
Phvul.003G117100 Phaseolus vulgaris HOM05D001578 ORTHO05D001207 4.7e-07 58.9 159 26.4
VMungo1215G1199 Vigna mungo HOM05D001578 ORTHO05D001207 4.7e-07 58.9 159 27.7
Haze_01339 Corylus avellana HOM05D001578 ORTHO05D001207 6.1e-07 58.5 160 28.1
Potri.004G016500 Populus trichocarpa HOM05D003556 ORTHO05D003404 6.1e-07 58.5 174 28.7
QL06p012819 Quercus lobata HOM05D001578 ORTHO05D001207 6.1e-07 58.5 168 28.0
TAR216G0004 Trochodendron aralioides HOM05D003556 ORTHO05D003404 6.1e-07 58.5 122 27.9
Carub.0006s3492 Capsella rubella HOM05D003556 ORTHO05D003404 8.0e-07 58.2 180 21.7
MELO3C015291.2 Cucumis melo HOM05D003556 ORTHO05D003404 8.0e-07 58.2 150 24.7
Gohir.A11G107700 Gossypium hirsutum HOM05D008191 ORTHO05D010044 8.0e-07 58.2 167 26.9
Atru.chr4.844 Acer truncatum HOM05D004113 ORTHO05D005233 1.0e-06 57.8 168 25.6
CSS0043898 Camellia sinensis var. sinensis HOM05D003556 ORTHO05D003404 1.0e-06 57.8 147 26.5
Rhsim03G0038700 Rhododendron simsii HOM05D001578 ORTHO05D001207 1.0e-06 57.8 151 29.8
MD10G1032700 Malus domestica HOM05D004894 ORTHO05D005689 1.4e-06 57.4 177 33.3
Psat0s4829g0040 Pisum sativum HOM05D001578 ORTHO05D001207 1.4e-06 57.4 177 26.6
Migut.I00312 Erythranthe guttata HOM05D022792 ORTHO05D001819 1.8e-06 57.0 176 26.7
MD16G1150100 Malus domestica HOM05D001578 ORTHO05D001207 1.8e-06 57.0 169 26.6
Rhsim04G0244100 Rhododendron simsii HOM05D003146 ORTHO05D001819 1.8e-06 57.0 144 28.5
Medtr4g122750 Medicago truncatula HOM05D001578 ORTHO05D001207 2.3e-06 56.6 156 28.8
PSO210G6958 Papaver somniferum HOM05D003556 ORTHO05D003404 2.3e-06 56.6 168 24.4
Thecc.05G027500 Theobroma cacao HOM05D014554 ORTHO05D036092 2.3e-06 56.6 155 25.8
TPR.G33864 Trifolium pratense HOM05D001578 ORTHO05D001207 2.3e-06 56.6 170 25.9
CAN.G572.48 Capsicum annuum HOM05D001445 ORTHO05D001261 3.0e-06 56.2 103 37.9
ClCG00G004560 Citrullus lanatus HOM05D001445 ORTHO05D001261 3.0e-06 56.2 185 24.9
PGSC0003DMG400037656 Solanum tuberosum HOM05D004113 ORTHO05D005233 3.0e-06 56.2 172 22.7
BcaC01g06767 Brassica carinata HOM05D003556 ORTHO05D003404 4.0e-06 55.8 180 21.1
BolC3t16082H Brassica oleracea HOM05D003556 ORTHO05D003404 4.0e-06 55.8 180 21.1
CSS0044540 Camellia sinensis var. sinensis HOM05D003556 ORTHO05D003404 4.0e-06 55.8 158 24.7
Cfa015283 Carpinus fangiana HOM05D001578 ORTHO05D001207 4.0e-06 55.8 145 25.5
ClCG03G017200 Citrullus lanatus HOM05D003556 ORTHO05D003404 4.0e-06 55.8 149 24.2
Thhalv10029000m.g Eutrema salsugineum HOM05D003556 ORTHO05D003404 4.0e-06 55.8 180 21.1
Manes.05G058600 Manihot esculenta HOM05D001445 ORTHO05D001261 4.0e-06 55.8 169 27.8
Nitab4.5_0004809g0010 Nicotiana tabacum HOM05D001578 ORTHO05D001207 4.0e-06 55.8 168 24.4
TWI14G0192 Tripterygium wilfordii HOM05D003556 ORTHO05D003404 4.0e-06 55.8 176 23.3
FAN07G2870 Fragaria x ananassa HOM05D017096 ORTHO05D019131 5.2e-06 55.5 166 29.5
FAN08G0902 Fragaria x ananassa HOM05D001445 ORTHO05D001261 5.2e-06 55.5 115 33.9
Lalb_Chr15g0088411 Lupinus albus HOM05D008403 ORTHO05D010317 5.2e-06 55.5 80 38.8
Sp6g02140 Schrenkiella parvula HOM05D003556 ORTHO05D003404 5.2e-06 55.5 180 21.1
CSS0025537 Camellia sinensis var. sinensis HOM05D003556 ORTHO05D003404 6.8e-06 55.1 152 23.0
CSS0050483 Camellia sinensis var. sinensis HOM05D003556 ORTHO05D003404 6.8e-06 55.1 152 23.0
CARHR037580 Cardamine hirsuta HOM05D001578 ORTHO05D001207 6.8e-06 55.1 150 26.0
Cfa018299 Carpinus fangiana HOM05D004894 ORTHO05D005689 6.8e-06 55.1 135 31.9
MELO3C017944.2 Cucumis melo HOM05D003556 ORTHO05D003404 6.8e-06 55.1 146 22.6
FAN04G1716 Fragaria x ananassa HOM05D001445 ORTHO05D001261 6.8e-06 55.1 115 33.9
FAN16G3582 Fragaria x ananassa HOM05D004113 ORTHO05D005233 8.8e-06 54.7 145 29.0
FAN18G2022 Fragaria x ananassa HOM05D001445 ORTHO05D001261 8.8e-06 54.7 114 34.2
Hma1.2p1_0311F.1_g121180 Hydrangea macrophylla HOM05D001445 ORTHO05D001261 8.8e-06 54.7 170 29.4
PGR031G2424 Punica granatum HOM05D001578 ORTHO05D001207 8.8e-06 54.7 145 25.5
Thecc.02G296800 Theobroma cacao HOM05D008403 ORTHO05D010317 8.8e-06 54.7 89 40.4


User provided reference genes

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