Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu016901.1 Olea europaea HOM05D007603 ORTHO05D009604 1.0e-131 473.4 243 100.0
Oeu036085.1 Olea europaea HOM05D007603 ORTHO05D009604 1.2e-95 353.6 234 82.1
MSTRG.14321 Avicennia marina HOM05D007603 ORTHO05D009604 1.1e-56 224.2 233 59.2
SalBow7G0820 Salvia bowleyana HOM05D007603 ORTHO05D009604 1.2e-55 220.7 233 57.9
Solyc07g150145.1 Solanum lycopersicum HOM05D007603 ORTHO05D009604 3.9e-46 189.1 244 52.5
Nitab4.5_0002629g0010 Nicotiana tabacum HOM05D007603 ORTHO05D009604 3.1e-43 179.5 241 53.1
Hma1.2p1_0002F.1_g002370 Hydrangea macrophylla HOM05D007603 ORTHO05D009604 1.6e-42 177.2 236 50.4
PGSC0003DMG400009384 Solanum tuberosum HOM05D007603 ORTHO05D009604 5.9e-42 175.3 243 51.9
Dinv06842 Davidia involucrata HOM05D007603 ORTHO05D009604 7.5e-37 158.3 239 48.1
Actinidia10989 Actinidia chinensis HOM05D007603 ORTHO05D009604 3.1e-35 152.9 225 47.6
CSS0037684 Camellia sinensis var. sinensis HOM05D007603 ORTHO05D009604 4.5e-34 149.1 244 45.5
Manes.13G141000 Manihot esculenta HOM05D007603 ORTHO05D009604 1.0e-33 147.9 247 45.3
Sopen07g027470 Solanum pennellii HOM05D007603 ORTHO05D009604 5.0e-33 145.6 243 45.7
Cc05_g07840 Coffea canephora HOM05D007603 ORTHO05D009604 1.6e-31 140.6 229 47.2
MELO3C018861.2 Cucumis melo HOM05D007603 ORTHO05D009604 2.7e-31 139.8 245 45.7
Thecc.02G187900 Theobroma cacao HOM05D007603 ORTHO05D009604 4.7e-31 139.0 245 44.1
ClCG02G002280 Citrullus lanatus HOM05D007603 ORTHO05D009604 1.2e-29 134.4 243 44.0
Dinv39835 Davidia involucrata HOM05D007603 ORTHO05D009604 2.0e-29 133.7 233 44.6
Nitab4.5_0006973g0020 Nicotiana tabacum HOM05D007603 ORTHO05D009604 9.8e-29 131.3 183 53.0
CiPaw.03G182900 Carya illinoinensis HOM05D007603 ORTHO05D009604 4.8e-28 129.0 247 42.9
DCAR_013048 Daucus carota HOM05D007603 ORTHO05D009604 4.8e-28 129.0 237 44.7
TWI23G0636 Tripterygium wilfordii HOM05D007603 ORTHO05D009604 1.1e-27 127.9 239 44.4
vmacro12353 Vaccinium macrocarpon HOM05D007603 ORTHO05D009604 1.1e-27 127.9 240 43.8
CAN.G1543.2 Capsicum annuum HOM05D007603 ORTHO05D009604 1.6e-26 124.0 182 50.0
Potri.013G120700 Populus trichocarpa HOM05D007603 ORTHO05D009604 3.5e-26 122.9 250 42.0
Potri.013G072200 Populus trichocarpa HOM05D007603 ORTHO05D009604 5.9e-26 122.1 250 42.8
Sabra13G0062200 Salix brachista HOM05D007603 ORTHO05D009604 1.0e-25 121.3 258 41.1
HanXRQChr08g0231781 Helianthus annuus HOM05D007603 ORTHO05D009604 5.0e-25 119.0 235 43.4
Ciclev10017455m.g Citrus clementina HOM05D007603 ORTHO05D009604 1.1e-24 117.9 244 40.2
Gohir.A03G153900 Gossypium hirsutum HOM05D007603 ORTHO05D009604 1.1e-24 117.9 238 41.6
Actinidia11119 Actinidia chinensis HOM05D007603 ORTHO05D009604 1.5e-24 117.5 238 39.1
Gohir.D02G176900 Gossypium hirsutum HOM05D007603 ORTHO05D009604 1.9e-24 117.1 240 42.1
PGR042G1843 Punica granatum HOM05D007603 ORTHO05D009604 1.9e-24 117.1 247 42.9
Sabra13G0102000 Salix brachista HOM05D007603 ORTHO05D009604 4.2e-24 115.9 250 40.8
Sed0002279 Sechium edule HOM05D007603 ORTHO05D009604 4.2e-24 115.9 243 43.2
arahy.Tifrunner.gnm1.ann1.M59RYT Arachis hypogaea HOM05D007603 ORTHO05D009604 1.6e-23 114.0 250 40.0
Atru.chr6.2855 Acer truncatum HOM05D007603 ORTHO05D009604 2.1e-23 113.6 249 39.8
arahy.Tifrunner.gnm1.ann1.76DKB4 Arachis hypogaea HOM05D007603 ORTHO05D009604 2.1e-23 113.6 250 40.4
Lsat_1_v5_gn_8_137160 Lactuca sativa HOM05D007603 ORTHO05D009604 6.1e-23 112.1 241 41.9
Nn1g04268 Nelumbo nucifera HOM05D007603 ORTHO05D009604 8.0e-23 111.7 262 39.7
unitig_749.g13962 Utricularia gibba HOM05D007603 ORTHO05D009604 1.0e-22 111.3 234 39.7
Haze_13265 Corylus avellana HOM05D007603 ORTHO05D009604 1.8e-22 110.5 240 38.3
PSO541G0270 Papaver somniferum HOM05D007603 ORTHO05D009604 2.3e-22 110.2 264 39.4
Cpa.g.sc50.10 Carica papaya HOM05D007603 ORTHO05D009604 4.0e-22 109.4 279 38.0
QL08p040785 Quercus lobata HOM05D007603 ORTHO05D009604 5.2e-22 109.0 250 39.6
Sed0026242 Sechium edule HOM05D007603 ORTHO05D009604 6.8e-22 108.6 243 39.5
THA.LOC104823514 Tarenaya hassleriana HOM05D007603 ORTHO05D009604 8.9e-22 108.2 253 39.5
Prupe.3G128600 Prunus persica HOM05D007603 ORTHO05D009604 1.2e-21 107.8 240 39.6
Aa31sc35G40 Aethionema arabicum HOM05D007603 ORTHO05D009604 3.4e-21 106.3 255 38.8
Carub.0005s2128 Capsella rubella HOM05D007603 ORTHO05D009604 3.7e-20 102.8 241 39.4
Lj3g0007744 Lotus japonicus HOM05D007603 ORTHO05D009604 4.9e-20 102.4 243 38.7
Medtr2g090770 Medicago truncatula HOM05D007603 ORTHO05D009604 4.9e-20 102.4 239 38.5
TWI14G0603 Tripterygium wilfordii HOM05D007603 ORTHO05D009604 6.3e-20 102.1 241 38.6
TAR626G1090 Trochodendron aralioides HOM05D001501 ORTHO05D001329 6.3e-20 102.1 219 41.1
VMungo1080G0021 Vigna mungo HOM05D007603 ORTHO05D009604 6.3e-20 102.1 245 35.5
Aqoxy1G02256 Aquilegia oxysepala HOM05D007603 ORTHO05D009604 5.4e-19 99.0 261 37.5
Phvul.005G099400 Phaseolus vulgaris HOM05D007603 ORTHO05D009604 2.0e-18 97.1 240 35.8
Thhalv10010720m.g Eutrema salsugineum HOM05D007603 ORTHO05D009604 4.5e-18 95.9 256 39.1
BcaB02g07727 Brassica carinata HOM05D007603 ORTHO05D009604 1.7e-17 94.0 247 39.3
Psat5g274200 Pisum sativum HOM05D007603 ORTHO05D009604 2.3e-17 93.6 236 37.3
Lalb_Chr14g0367241 Lupinus albus HOM05D007603 ORTHO05D009604 2.9e-17 93.2 248 36.3
TPR.G6485 Trifolium pratense HOM05D007603 ORTHO05D009604 3.9e-17 92.8 241 35.3
Glyma.12G207700 Glycine max HOM05D007603 ORTHO05D009604 6.6e-17 92.0 240 37.1
FAN02G2478 Fragaria x ananassa HOM05D007603 ORTHO05D009604 1.5e-16 90.9 247 38.9
Sp5g07770 Schrenkiella parvula HOM05D007603 ORTHO05D009604 2.5e-16 90.1 256 35.9
EL10Ac9g20838 Beta vulgaris HOM05D007603 ORTHO05D009604 1.6e-15 87.4 227 37.0
BcaC08g44692 Brassica carinata HOM05D007603 ORTHO05D009604 2.8e-15 86.7 243 39.5
A07p22220 Brassica napus HOM05D007603 ORTHO05D009604 2.8e-15 86.7 245 38.0
C06p22280 Brassica napus HOM05D007603 ORTHO05D009604 2.8e-15 86.7 243 39.5
BolC6t37414H Brassica oleracea HOM05D007603 ORTHO05D009604 2.8e-15 86.7 243 39.5
AT3G54680 Arabidopsis thaliana HOM05D007603 ORTHO05D009604 3.6e-15 86.3 239 36.0
CARHR164600 Cardamine hirsuta HOM05D007603 ORTHO05D009604 3.6e-15 86.3 247 36.8
PSO675G7067 Papaver somniferum HOM05D007603 ORTHO05D009604 3.6e-15 86.3 266 35.7
BraA07t29901Z Brassica rapa HOM05D007603 ORTHO05D009604 1.0e-14 84.7 243 39.1
THA.LOC104825256 Tarenaya hassleriana HOM05D007603 ORTHO05D009604 1.4e-14 84.3 252 37.3
CDE10G1214 Ceratophyllum demersum HOM05D007603 ORTHO05D009604 8.9e-14 81.6 236 36.0
AL5G35760 Arabidopsis lyrata HOM05D007603 ORTHO05D009604 1.5e-13 80.9 252 34.9
CsaV3_7G003160 Cucumis sativus L. HOM05D007603 ORTHO05D009604 4.4e-13 79.3 184 40.2
Hund01003 Selenicereus undatus HOM05D007603 ORTHO05D009604 4.4e-13 79.3 235 37.0
CDE10G0532 Ceratophyllum demersum HOM05D007603 ORTHO05D009604 5.8e-13 79.0 239 34.3
TAR624G0387 Trochodendron aralioides HOM05D007603 ORTHO05D009604 7.5e-13 78.6 165 40.0
Glyma.13G293400 Glycine max HOM05D007603 ORTHO05D009604 2.2e-12 77.0 241 32.8
A09p47630 Brassica napus HOM05D007603 ORTHO05D009604 3.7e-12 76.3 219 36.1
AUR62043430 Chenopodium quinoa HOM05D007603 ORTHO05D009604 1.9e-11 73.9 219 32.0
AUR62036075 Chenopodium quinoa HOM05D007603 ORTHO05D009604 5.4e-11 72.4 235 31.5
MBI06_g00805_MAGBIO Magnolia biondii HOM05D007603 ORTHO05D009604 5.4e-11 72.4 151 39.7
C08p29830 Brassica napus HOM05D007603 ORTHO05D009604 2.7e-10 70.1 227 34.4
BcaC07g39795 Brassica carinata HOM05D007603 ORTHO05D009604 6.0e-10 68.9 218 34.4
FAN14G3046 Fragaria x ananassa HOM05D007603 ORTHO05D016291 6.0e-10 68.9 227 34.4
SalBow7G4116 Salvia bowleyana HOM05D007603 ORTHO05D009604 7.8e-10 68.6 56 69.6
BcaB01g00169 Brassica carinata HOM05D007603 ORTHO05D009604 1.0e-09 68.2 215 34.4
Hund07856 Selenicereus undatus HOM05D007603 ORTHO05D009604 1.3e-09 67.8 118 40.7
Rhsim06G0135700 Rhododendron simsii HOM05D007603 ORTHO05D009604 1.2e-07 61.2 108 39.8
FAN09G3062 Fragaria x ananassa HOM05D007603 ORTHO05D009604 3.6e-07 59.7 157 38.9


User provided reference genes

Program Settings