Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu016882.1 Olea europaea HOM05D008201 ORTHO05D005639 1.4e-80 303.5 240 100.0
Oeu046328.1 Olea europaea HOM05D014976 ORTHO05D005639 2.1e-23 113.6 257 60.3
HanXRQChr08g0216051 Helianthus annuus HOM05D008201 ORTHO05D005639 4.2e-16 89.4 181 54.1
SGA_v2.0_scaffold275G46576 Striga asiatica HOM05D014976 ORTHO05D005639 1.6e-15 87.4 226 56.2
TAR376G0148 Trochodendron aralioides HOM05D008201 ORTHO05D005639 4.7e-15 85.9 170 55.3
Potri.005G248100 Populus trichocarpa HOM05D008201 ORTHO05D005639 2.3e-14 83.6 178 60.1
CiPaw.08G071500 Carya illinoinensis HOM05D008201 ORTHO05D005639 6.7e-14 82.0 168 53.0
CSS0003901 Camellia sinensis var. sinensis HOM05D008201 ORTHO05D005639 4.4e-13 79.3 194 48.5
Manes.05G140400 Manihot esculenta HOM05D008201 ORTHO05D005639 7.4e-13 78.6 129 62.0
Lsat_1_v5_gn_8_27820 Lactuca sativa HOM05D008201 ORTHO05D005639 9.7e-13 78.2 176 50.0
Prupe.1G356400 Prunus persica HOM05D008201 ORTHO05D005639 2.2e-12 77.0 199 51.3
Dinv31918 Davidia involucrata HOM05D008201 ORTHO05D005639 2.8e-12 76.6 190 56.3
Eucgr.F01726 Eucalyptus grandis HOM05D008201 ORTHO05D005639 2.8e-12 76.6 155 37.4
Dinv39575 Davidia involucrata HOM05D008201 ORTHO05D005639 6.3e-12 75.5 204 53.4
TWI56G0959 Tripterygium wilfordii HOM05D008201 ORTHO05D005639 1.4e-11 74.3 158 59.5
Nitab4.5_0000588g0250 Nicotiana tabacum HOM05D014976 ORTHO05D005639 3.1e-11 73.2 147 53.1
Aqoxy6G01838 Aquilegia oxysepala HOM05D008201 ORTHO05D005639 1.2e-10 71.2 188 40.4
SalBow7G0401 Salvia bowleyana HOM05D008201 ORTHO05D005639 7.7e-10 68.6 193 56.0
THA.LOC104809672 Tarenaya hassleriana HOM05D008570 ORTHO05D005639 1.0e-09 68.2 180 49.4
TWI36G0214 Tripterygium wilfordii HOM05D008201 ORTHO05D005639 1.0e-09 68.2 165 55.8
arahy.Tifrunner.gnm1.ann1.QP4M0U Arachis hypogaea HOM05D008201 ORTHO05D005639 3.8e-09 66.2 168 51.8
Sabra05G0191700 Salix brachista HOM05D008201 ORTHO05D005639 8.5e-09 65.1 181 36.5
ECA233G2943 Erigeron canadensis HOM05D002022 ORTHO05D002056 1.4e-08 64.3 214 41.6
Sopen04g035830 Solanum pennellii HOM05D014976 ORTHO05D005639 1.9e-08 63.9 158 48.1
arahy.Tifrunner.gnm1.ann1.DA1J6X Arachis hypogaea HOM05D008201 ORTHO05D005639 2.5e-08 63.5 156 52.6
BcaC08g47283 Brassica carinata HOM05D008570 ORTHO05D005639 2.5e-08 63.5 182 48.9
BolC6t40053H Brassica oleracea HOM05D008570 ORTHO05D005639 2.5e-08 63.5 182 48.9
Gohir.A01G107800 Gossypium hirsutum HOM05D008201 ORTHO05D005639 3.2e-08 63.2 154 51.9
TAR628G0948 Trochodendron aralioides HOM05D008201 ORTHO05D005639 3.2e-08 63.2 151 62.3
Psat5g004800 Pisum sativum HOM05D015205 ORTHO05D005639 4.2e-08 62.8 165 40.6
Carub.0002s2307 Capsella rubella HOM05D008570 ORTHO05D005639 1.2e-07 61.2 187 37.4
Hma1.2p1_1100F.1_g257080 Hydrangea macrophylla HOM05D008201 ORTHO05D005639 1.6e-07 60.8 196 51.5
Peaxi162Scf00174g01621 Petunia axillaris HOM05D014976 ORTHO05D005639 1.6e-07 60.8 171 50.3
Haze_22743 Corylus avellana HOM05D025300 ORTHO05D005639 2.7e-07 60.1 284 35.9
Lj4A14T47 Lonicera japonica HOM05D008201 ORTHO05D005639 2.7e-07 60.1 210 32.4
MD15G1003900 Malus domestica HOM05D008201 ORTHO05D005639 2.7e-07 60.1 222 41.4
A07p28610 Brassica napus HOM05D008570 ORTHO05D005639 3.6e-07 59.7 180 46.7
Gohir.A05G181000 Gossypium hirsutum HOM05D008201 ORTHO05D005639 3.6e-07 59.7 163 51.5
BolC2t09364H Brassica oleracea HOM05D008570 ORTHO05D005639 4.7e-07 59.3 183 48.6
C02p33360 Brassica napus HOM05D008570 ORTHO05D005639 6.1e-07 58.9 185 50.3
Lsat_1_v5_gn_8_28441 Lactuca sativa HOM05D008570 ORTHO05D005639 6.1e-07 58.9 151 47.0
MD08G1004500 Malus domestica HOM05D008201 ORTHO05D005639 8.0e-07 58.5 212 49.1
vmacro04391 Vaccinium macrocarpon HOM05D008201 ORTHO05D005639 8.0e-07 58.5 177 49.7
Glyma.04G009400 Glycine max HOM05D008201 ORTHO05D005639 1.0e-06 58.2 158 50.6
Medtr3g117290 Medicago truncatula HOM05D015205 ORTHO05D005639 1.0e-06 58.2 160 38.1
Cfa014042 Carpinus fangiana HOM05D025300 ORTHO05D005639 1.4e-06 57.8 64 53.1
MSTRG.1124 Avicennia marina HOM05D008201 ORTHO05D005639 1.8e-06 57.4 195 46.7
Ciclev10002349m.g Citrus clementina HOM05D008201 ORTHO05D005639 1.8e-06 57.4 153 54.2
TPR.G32200 Trifolium pratense HOM05D015205 ORTHO05D005639 1.8e-06 57.4 168 38.1
Actinidia17030 Actinidia chinensis HOM05D000356 ORTHO05D000265 2.3e-06 57.0 167 53.3
Gohir.D01G094300 Gossypium hirsutum HOM05D008201 ORTHO05D005639 2.3e-06 57.0 155 43.9
A07p41750 Brassica napus HOM05D008570 ORTHO05D005639 3.9e-06 56.2 184 51.1
MSTRG.24222 Avicennia marina HOM05D014976 ORTHO05D005639 6.7e-06 55.5 160 55.6
CAN.G311.98 Capsicum annuum HOM05D014976 ORTHO05D005639 6.7e-06 55.5 144 54.2
FvH4_2g37690 Fragaria vesca HOM05D008201 ORTHO05D005639 8.8e-06 55.1 278 46.0
Gorai.002G119600 Gossypium raimondii HOM05D008201 ORTHO05D005639 8.8e-06 55.1 147 52.4
PGSC0003DMG400009968 Solanum tuberosum HOM05D014976 ORTHO05D005639 8.8e-06 55.1 161 42.2


User provided reference genes

Program Settings