Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu016871.1 Olea europaea HOM05D001775 ORTHO05D006205 5.0e-96 354.4 170 100.0
Oeu019572.1 Olea europaea HOM05D001775 ORTHO05D006205 4.7e-86 321.2 170 88.8
Ciclev10002700m.g Citrus clementina HOM05D001775 ORTHO05D006205 2.9e-72 275.4 170 74.1
Actinidia15517 Actinidia chinensis HOM05D001775 ORTHO05D006205 5.0e-72 274.6 169 74.0
CSS0024195 Camellia sinensis var. sinensis HOM05D001775 ORTHO05D006205 1.1e-71 273.5 170 73.5
Hma1.2p1_0612F.1_g189000 Hydrangea macrophylla HOM05D001775 ORTHO05D006205 5.5e-71 271.2 170 72.4
GSVIVG01013411001 Vitis vinifera HOM05D001775 ORTHO05D006205 1.2e-70 270.0 170 71.2
CiPaw.07G134900 Carya illinoinensis HOM05D001775 ORTHO05D006205 2.1e-70 269.2 170 71.2
QL02p015365 Quercus lobata HOM05D001775 ORTHO05D006205 3.6e-70 268.5 169 72.2
QL02p015396 Quercus lobata HOM05D001775 ORTHO05D006205 3.6e-70 268.5 169 72.2
Cfa014124 Carpinus fangiana HOM05D001775 ORTHO05D006205 1.0e-69 266.9 170 71.2
Manes.18G002900 Manihot esculenta HOM05D001775 ORTHO05D006205 2.3e-69 265.8 170 71.8
Hund05085 Selenicereus undatus HOM05D001775 ORTHO05D006205 4.4e-68 261.5 170 68.8
Cpa.g.sc26.151 Carica papaya HOM05D001775 ORTHO05D006205 3.7e-67 258.5 172 69.2
PSO675G2258 Papaver somniferum HOM05D001775 ORTHO05D006205 1.4e-66 256.5 170 67.1
Potri.005G255100 Populus trichocarpa HOM05D001775 ORTHO05D006205 1.8e-66 256.1 170 67.1
Cc10_g00340 Coffea canephora HOM05D001775 ORTHO05D006205 3.1e-66 255.4 170 67.1
Ca_15392_v3 Cicer arietinum L. HOM05D001775 ORTHO05D006205 5.4e-66 254.6 170 67.6
Eucgr.F01803 Eucalyptus grandis HOM05D001775 ORTHO05D006205 1.6e-65 253.1 170 67.1
DCAR_016792 Daucus carota HOM05D001775 ORTHO05D006205 2.0e-65 252.7 170 69.4
Haze_22846 Corylus avellana HOM05D001775 ORTHO05D006205 2.7e-65 252.3 174 68.4
MD06G1005500 Malus domestica HOM05D001775 ORTHO05D006205 3.5e-65 251.9 170 65.9
PSO541G5829 Papaver somniferum HOM05D001775 ORTHO05D006205 4.5e-65 251.5 170 65.3
MBI08_g29079_MAGBIO Magnolia biondii HOM05D001775 ORTHO05D006205 5.9e-65 251.1 170 66.5
arahy.Tifrunner.gnm1.ann1.62LGBX Arachis hypogaea HOM05D001775 ORTHO05D006205 1.3e-64 250.0 170 67.1
TWI12G0153 Tripterygium wilfordii HOM05D001775 ORTHO05D006205 2.2e-64 249.2 170 65.3
FAN04G1208 Fragaria x ananassa HOM05D001775 ORTHO05D006205 3.8e-64 248.4 170 63.5
Thecc.08G064000 Theobroma cacao HOM05D001775 ORTHO05D006205 5.0e-64 248.1 170 65.9
TAR628G0191 Trochodendron aralioides HOM05D001775 ORTHO05D006205 6.5e-64 247.7 170 67.1
FAN08G0076 Fragaria x ananassa HOM05D001775 ORTHO05D006205 8.5e-64 247.3 170 62.9
arahy.Tifrunner.gnm1.ann1.NA36AX Arachis hypogaea HOM05D001775 ORTHO05D006205 1.1e-63 246.9 170 66.5
RcHm_v2.0_Chr7g0216421 Rosa chinensis HOM05D001775 ORTHO05D006205 1.5e-63 246.5 170 62.9
FvH4_5g25920 Fragaria vesca HOM05D001775 ORTHO05D006205 1.9e-63 246.1 170 62.4
FAN13G2435 Fragaria x ananassa HOM05D001775 ORTHO05D006205 1.9e-63 246.1 170 62.4
Glyma.06G015300 Glycine max HOM05D001775 ORTHO05D006205 2.5e-63 245.7 170 65.9
Prupe.5G006800 Prunus persica HOM05D001775 ORTHO05D006205 3.2e-63 245.4 165 66.1
Lalb_Chr11g0061401 Lupinus albus HOM05D001775 ORTHO05D006205 7.2e-63 244.2 170 65.9
AUR62035157 Chenopodium quinoa HOM05D001775 ORTHO05D006205 1.2e-62 243.4 172 65.7
AUR62024107 Chenopodium quinoa HOM05D001775 ORTHO05D006205 3.6e-62 241.9 172 65.1
Phvul.009G007300 Phaseolus vulgaris HOM05D001775 ORTHO05D006205 4.7e-62 241.5 170 63.5
SGA_v2.0_scaffold133G34600 Striga asiatica HOM05D001775 ORTHO05D006205 4.7e-62 241.5 171 66.7
Sabra05G0197600 Salix brachista HOM05D001775 ORTHO05D006205 2.3e-61 239.2 170 65.9
MSTRG.24916 Avicennia marina HOM05D001775 ORTHO05D006205 4.0e-61 238.4 170 67.1
TPR.G38180 Trifolium pratense HOM05D001775 ORTHO05D006205 1.2e-60 236.9 181 59.7
Hund01795 Selenicereus undatus HOM05D001775 ORTHO05D006205 2.0e-60 236.1 170 61.2
SalBow7G0166 Salvia bowleyana HOM05D001775 ORTHO05D006205 2.6e-60 235.7 170 62.9
vmacro21778 Vaccinium macrocarpon HOM05D001775 ORTHO05D006205 2.6e-60 235.7 207 57.0
Sc02g0009220 Simmondsia chinensis HOM05D005712 ORTHO05D007865 4.9e-59 231.5 154 68.2
C06p50600 Brassica napus HOM05D001775 ORTHO05D006205 6.3e-59 231.1 170 62.4
ClCG08G009240 Citrullus lanatus HOM05D001775 ORTHO05D006205 6.3e-59 231.1 170 62.4
EL10Ac1g01895 Beta vulgaris HOM05D001775 ORTHO05D006205 1.8e-58 229.6 172 59.9
BcaB07g32074 Brassica carinata HOM05D001775 ORTHO05D006205 1.8e-58 229.6 170 62.4
AL2G36510 Arabidopsis lyrata HOM05D001775 ORTHO05D006205 2.4e-58 229.2 170 61.2
BcaC08g47254 Brassica carinata HOM05D001775 ORTHO05D006205 2.4e-58 229.2 170 61.8
A07p42030 Brassica napus HOM05D001775 ORTHO05D006205 2.4e-58 229.2 170 61.8
BolC6t40085H Brassica oleracea HOM05D001775 ORTHO05D006205 2.4e-58 229.2 170 61.8
BraA07t31733Z Brassica rapa HOM05D001775 ORTHO05D006205 2.4e-58 229.2 170 61.8
Sp5g31560 Schrenkiella parvula HOM05D001775 ORTHO05D006205 2.4e-58 229.2 170 62.4
Thhalv10019232m.g Eutrema salsugineum HOM05D001775 ORTHO05D006205 3.1e-58 228.8 170 61.8
Sed0015170 Sechium edule HOM05D001775 ORTHO05D006205 4.1e-58 228.4 170 61.2
CAN.G1330.2 Capsicum annuum HOM05D001775 ORTHO05D006205 5.4e-58 228.0 170 61.8
AT1G76405 Arabidopsis thaliana HOM05D001775 ORTHO05D006205 7.0e-58 227.6 170 60.6
BcaC08g47138 Brassica carinata HOM05D001775 ORTHO05D006205 9.2e-58 227.3 170 61.8
Thhalv10008937m.g Eutrema salsugineum HOM05D001775 ORTHO05D006205 1.6e-57 226.5 170 61.2
Gohir.A05G177800 Gossypium hirsutum HOM05D001775 ORTHO05D006205 2.0e-57 226.1 170 60.6
Sp1g18510 Schrenkiella parvula HOM05D001775 ORTHO05D006205 2.0e-57 226.1 170 61.2
THA.LOC104813743 Tarenaya hassleriana HOM05D001775 ORTHO05D006205 2.0e-57 226.1 170 60.6
AL1G33820 Arabidopsis lyrata HOM05D001775 ORTHO05D006205 2.7e-57 225.7 170 60.0
BcaC05g25983 Brassica carinata HOM05D001775 ORTHO05D006205 2.7e-57 225.7 170 62.4
Gorai.009G186200 Gossypium raimondii HOM05D001775 ORTHO05D006205 2.7e-57 225.7 170 60.0
Peaxi162Scf00680g00415 Petunia axillaris HOM05D001775 ORTHO05D006205 2.7e-57 225.7 170 62.4
Carub.0001s2027 Capsella rubella HOM05D001775 ORTHO05D006205 4.5e-57 224.9 170 61.8
A06p16800 Brassica napus HOM05D001775 ORTHO05D009111 5.9e-57 224.6 170 61.8
C05p19360 Brassica napus HOM05D001775 ORTHO05D009111 5.9e-57 224.6 170 62.4
BolC5t30639H Brassica oleracea HOM05D001775 ORTHO05D006205 5.9e-57 224.6 170 62.4
CARHR069960 Cardamine hirsuta HOM05D001775 ORTHO05D006205 5.9e-57 224.6 170 61.2
Gohir.D05G181200 Gossypium hirsutum HOM05D001775 ORTHO05D006205 5.9e-57 224.6 170 60.0
BraA06t24788Z Brassica rapa HOM05D001775 ORTHO05D006205 1.0e-56 223.8 170 61.8
CARHR021240 Cardamine hirsuta HOM05D001775 ORTHO05D006205 1.0e-56 223.8 170 61.8
Nitab4.5_0001756g0150 Nicotiana tabacum HOM05D001775 ORTHO05D006205 1.7e-56 223.0 171 63.2
Nitab4.5_0029491g0010 Nicotiana tabacum HOM05D001775 ORTHO05D006205 1.7e-56 223.0 171 63.2
AT1G20816 Arabidopsis thaliana HOM05D001775 ORTHO05D006205 2.3e-56 222.6 170 59.4
HanXRQChr05g0144711 Helianthus annuus HOM05D001775 ORTHO05D006205 2.9e-56 222.2 198 54.5
Rhsim06G0004200 Rhododendron simsii HOM05D001775 ORTHO05D006205 2.9e-56 222.2 237 48.9
Solyc04g082680.3 Solanum lycopersicum HOM05D001775 ORTHO05D006205 5.0e-56 221.5 170 61.2
Sopen04g036310 Solanum pennellii HOM05D001775 ORTHO05D006205 6.6e-56 221.1 170 61.2
Atru.chr13.81 Acer truncatum HOM05D001775 ORTHO05D006205 1.5e-55 219.9 143 69.2
Carub.0002s2331 Capsella rubella HOM05D001775 ORTHO05D006205 1.5e-55 219.9 170 58.8
PGSC0003DMG400009918 Solanum tuberosum HOM05D001775 ORTHO05D006205 2.5e-55 219.2 170 60.0
Medtr3g115990 Medicago truncatula HOM05D001775 ORTHO05D006205 4.3e-55 218.4 207 51.7
BcaC08g45531 Brassica carinata HOM05D001775 ORTHO05D006205 9.5e-55 217.2 170 60.0
C06p32060 Brassica napus HOM05D001775 ORTHO05D006205 9.5e-55 217.2 170 60.0
BolC6t38332H Brassica oleracea HOM05D001775 ORTHO05D006205 9.5e-55 217.2 170 60.0
A07p28510 Brassica napus HOM05D001775 ORTHO05D006205 1.2e-54 216.9 171 60.8
BraA07t30489Z Brassica rapa HOM05D001775 ORTHO05D006205 1.2e-54 216.9 171 60.8
CsaV3_6G031380 Cucumis sativus L. HOM05D001775 ORTHO05D006205 1.2e-54 216.9 170 59.4
Lsat_1_v5_gn_9_41801 Lactuca sativa HOM05D001775 ORTHO05D006205 1.2e-54 216.9 184 55.4
ECA232G0408 Erigeron canadensis HOM05D000593 ORTHO05D006205 2.8e-54 215.7 157 60.5
THA.LOC104811999 Tarenaya hassleriana HOM05D001775 ORTHO05D006205 3.6e-54 215.3 170 58.2
Migut.C00377 Erythranthe guttata HOM05D001775 ORTHO05D006205 6.1e-54 214.5 170 59.4
Aa31LG4G6480 Aethionema arabicum HOM05D001775 ORTHO05D006205 8.0e-54 214.2 175 57.7
PGR083G1854 Punica granatum HOM05D001775 ORTHO05D006205 8.0e-54 214.2 186 57.0
HanXRQChr14g0427901 Helianthus annuus HOM05D001775 ORTHO05D006205 1.4e-53 213.4 167 58.7
TWI56G1014 Tripterygium wilfordii HOM05D001775 ORTHO05D006205 1.4e-53 213.4 203 51.7
BcaB02g07061 Brassica carinata HOM05D001775 ORTHO05D006205 1.8e-53 213.0 171 60.2
HanXRQChr15g0492581 Helianthus annuus HOM05D001775 ORTHO05D006205 1.8e-53 213.0 191 53.9
Ah.00g001090 Amaranthus hybridus HOM05D001775 ORTHO05D006205 2.0e-52 209.5 174 57.5
ECA238G0508 Erigeron canadensis HOM05D001775 ORTHO05D006205 4.9e-51 204.9 190 51.6
Lsat_1_v5_gn_2_1320 Lactuca sativa HOM05D001775 ORTHO05D006205 8.3e-51 204.1 167 56.3
MELO3C026523.2 Cucumis melo HOM05D001775 ORTHO05D006205 5.4e-50 201.4 195 52.3
unitig_0.g2075 Utricularia gibba HOM05D001775 ORTHO05D006205 5.4e-50 201.4 192 53.1
Manes.05G125900 Manihot esculenta HOM05D001775 ORTHO05D006205 4.6e-49 198.4 137 63.5
HPP92_015233 Vanilla planifolia HOM05D001775 ORTHO05D006205 4.6e-49 198.4 170 51.8
ATR0807G198 Amborella trichopoda HOM05D001775 ORTHO05D006205 3.1e-45 185.7 171 51.5
COL.COLO4_36626 Corchorus olitorius HOM05D001775 ORTHO05D006205 1.2e-44 183.7 142 59.9
Dinv31976 Davidia involucrata HOM05D001775 ORTHO05D000295 2.6e-44 182.6 169 55.6
FAN18G0260 Fragaria x ananassa HOM05D001775 ORTHO05D006205 9.2e-42 174.1 125 56.0
Psat5g008840 Pisum sativum HOM05D001775 ORTHO05D006205 4.6e-41 171.8 153 52.9
Duzib116G0384 Durio zibethinus HOM05D001775 ORTHO05D006205 1.0e-40 170.6 170 49.4
Zm00001eb259570 Zea mays HOM05D001775 ORTHO05D006205 1.3e-40 170.2 176 48.3
Rhsim06G0004000 Rhododendron simsii HOM05D005712 ORTHO05D007865 3.9e-40 168.7 127 66.1
Lj4A6T36 Lonicera japonica HOM05D001775 ORTHO05D006205 1.5e-39 166.8 111 63.1
Os02g0832200 Oryza sativa ssp. japonica HOM05D001775 ORTHO05D006205 1.5e-39 166.8 188 47.3
Mapoly0001s0026 Marchantia polymorpha HOM05D001775 ORTHO05D006205 3.3e-39 165.6 171 45.0
CDE05G0488 Ceratophyllum demersum HOM05D001775 ORTHO05D006205 7.3e-39 164.5 147 51.0
CANSAT25G3735 Cannabis sativa HOM05D001775 ORTHO05D006205 3.1e-37 159.1 104 65.4
Pp3c16_8850 Physcomitrium patens HOM05D001775 ORTHO05D006205 4.0e-37 158.7 171 44.4
Duzib041G0706 Durio zibethinus HOM05D001775 ORTHO05D006205 2.6e-36 156.0 170 48.2
CDE05G0091 Ceratophyllum demersum HOM05D001775 ORTHO05D006205 2.2e-35 152.9 175 44.0
Nn5g31022 Nelumbo nucifera HOM05D001775 ORTHO05D006205 1.2e-33 147.1 170 47.1
arahy.Tifrunner.gnm1.ann1.5GY58N Arachis hypogaea HOM05D001775 ORTHO05D006205 7.3e-31 137.9 99 67.7
MCO07G511 Micromonas commoda HOM05D001775 ORTHO05D006205 2.3e-29 132.9 173 40.5
arahy.Tifrunner.gnm1.ann1.3KDH9X Arachis hypogaea HOM05D001775 ORTHO05D006205 2.9e-27 125.9 101 54.5
SMO117G0070 Selaginella moellendorffii HOM05D001775 ORTHO05D006205 4.1e-26 122.1 184 35.3
VMungo1309G1483 Vigna mungo HOM05D001775 ORTHO05D006205 5.4e-26 121.7 164 42.1
PRCOL_00001546 Prasinoderma coloniale HOM05D001775 ORTHO05D006205 2.7e-25 119.4 171 35.1
SMO114G0103 Selaginella moellendorffii HOM05D001775 ORTHO05D006205 6.0e-25 118.2 163 36.8
AagrBONN_evm.TU.Sc2ySwM_344.4857 Anthoceros agrestis HOM05D001775 ORTHO05D006205 3.9e-24 115.5 138 39.1
CBR_g44541 Chara braunii HOM05D001775 ORTHO05D006205 5.1e-24 115.2 171 33.9
AagrBONN_evm.TU.Sc2ySwM_362.1823 Anthoceros agrestis HOM05D001775 ORTHO05D006205 1.9e-23 113.2 172 36.0
arahy.Tifrunner.gnm1.ann1.S8I99S Arachis hypogaea HOM05D001775 ORTHO05D006205 2.1e-22 109.8 93 59.1
HPP92_015234 Vanilla planifolia HOM05D001775 ORTHO05D006205 2.1e-22 109.8 109 46.8
Pp3c5_19490 Physcomitrium patens HOM05D001775 ORTHO05D006205 1.4e-21 107.1 98 45.9
Nitab4.5_0005347g0040 Nicotiana tabacum HOM05D001775 ORTHO05D006205 1.0e-16 90.9 52 71.2
arahy.Tifrunner.gnm1.ann1.FUJ1Q4 Arachis hypogaea HOM05D001795 ORTHO05D006205 1.3e-16 90.5 67 58.2


User provided reference genes

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