Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu016802.1 Olea europaea HOM05D000254 ORTHO05D013445 1.4e-27 125.6 63 100.0
Oeu019434.1 Olea europaea HOM05D000254 ORTHO05D000165 3.9e-22 107.5 61 83.6
Oeu023778.1 Olea europaea HOM05D000254 ORTHO05D000165 6.7e-22 106.7 61 83.6
Oeu047233.1 Olea europaea HOM05D000254 ORTHO05D000165 1.6e-20 102.1 60 85.0
TWI09G0129 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 1.6e-15 85.5 61 65.6
TWI38G0832 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 1.6e-15 85.5 61 65.6
TWI18G0729 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 3.6e-15 84.3 61 65.6
TWI31G1358 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 5.7e-13 77.0 56 64.3
TWI12G0599 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 1.6e-12 75.5 58 62.1
TWI77G0505 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 2.2e-12 75.1 56 62.5
Potri.014G176150 Populus trichocarpa HOM05D000254 ORTHO05D000165 2.8e-12 74.7 59 62.7
TWI34G0099 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 2.8e-12 74.7 56 62.5
Atru.chr1.3970 Acer truncatum HOM05D000254 ORTHO05D000165 4.1e-11 70.9 61 57.4
Atru.chr2.2110 Acer truncatum HOM05D000254 ORTHO05D000165 4.1e-11 70.9 61 59.0
RcHm_v2.0_Chr6g0246041 Rosa chinensis HOM05D000254 ORTHO05D000165 9.1e-11 69.7 61 57.4
Atru.chr1.1634 Acer truncatum HOM05D000254 ORTHO05D000165 1.5e-10 68.9 58 60.3
Atru.chr8.580 Acer truncatum HOM05D000254 ORTHO05D000165 2.0e-10 68.6 55 61.8
Atru.chr1.1825 Acer truncatum HOM05D000254 ORTHO05D000165 2.6e-10 68.2 61 57.4
Atru.chr2.2113 Acer truncatum HOM05D000254 ORTHO05D000165 4.5e-10 67.4 58 58.6
CiPaw.08G088300 Carya illinoinensis HOM05D000254 ORTHO05D000165 4.5e-10 67.4 62 53.2
Atru.chr4.1830 Acer truncatum HOM05D000254 ORTHO05D000165 5.9e-10 67.0 55 60.0
Ciclev10013343m.g Citrus clementina HOM05D000254 ORTHO05D000165 5.9e-10 67.0 62 51.6
arahy.Tifrunner.gnm1.ann1.EZBA4V Arachis hypogaea HOM05D000254 ORTHO05D000165 7.7e-10 66.6 61 50.8
arahy.Tifrunner.gnm1.ann1.W5KZ3V Arachis hypogaea HOM05D000254 ORTHO05D000165 7.7e-10 66.6 61 50.8
arahy.Tifrunner.gnm1.ann1.X7IJKV Arachis hypogaea HOM05D000254 ORTHO05D000165 7.7e-10 66.6 61 50.8
CiPaw.03G145600 Carya illinoinensis HOM05D000254 ORTHO05D000165 7.7e-10 66.6 62 53.2
AUR62000909 Chenopodium quinoa HOM05D000254 ORTHO05D000165 7.7e-10 66.6 61 55.7
AUR62002341 Chenopodium quinoa HOM05D000254 ORTHO05D000165 7.7e-10 66.6 61 55.7
AUR62003553 Chenopodium quinoa HOM05D000254 ORTHO05D000165 7.7e-10 66.6 61 55.7
AUR62005882 Chenopodium quinoa HOM05D000254 ORTHO05D000165 7.7e-10 66.6 61 55.7
AUR62015653 Chenopodium quinoa HOM05D000254 ORTHO05D000165 7.7e-10 66.6 61 55.7
AUR62025266 Chenopodium quinoa HOM05D000254 ORTHO05D000165 7.7e-10 66.6 61 55.7
AUR62037466 Chenopodium quinoa HOM05D000254 ORTHO05D000165 7.7e-10 66.6 61 55.7
AUR62039522 Chenopodium quinoa HOM05D000254 ORTHO05D000165 7.7e-10 66.6 61 55.7
Ciclev10024545m.g Citrus clementina HOM05D000254 ORTHO05D000165 7.7e-10 66.6 58 53.4
Atru.chr10.694 Acer truncatum HOM05D000254 ORTHO05D000165 1.0e-09 66.2 54 63.0
Atru.chr3.2678 Acer truncatum HOM05D000254 ORTHO05D000165 1.0e-09 66.2 61 55.7
TWI15G0641 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 1.0e-09 66.2 59 59.3
Atru.chr13.1640 Acer truncatum HOM05D000254 ORTHO05D000165 1.3e-09 65.9 62 53.2
Atru.chr2.244 Acer truncatum HOM05D000254 ORTHO05D000165 1.3e-09 65.9 61 55.7
Atru.chr12.1790 Acer truncatum HOM05D000254 ORTHO05D000165 1.7e-09 65.5 62 53.2
Atru.ctg1152.3 Acer truncatum HOM05D000254 ORTHO05D000165 1.7e-09 65.5 61 54.1
LjContig00408g0003021 Lotus japonicus HOM05D000254 ORTHO05D000165 1.7e-09 65.5 61 50.8
QL04p088322 Quercus lobata HOM05D000254 ORTHO05D000165 1.7e-09 65.5 60 53.3
QL05p025611 Quercus lobata HOM05D000254 ORTHO05D000165 1.7e-09 65.5 59 54.2
QL05p042212 Quercus lobata HOM05D000254 ORTHO05D000165 1.7e-09 65.5 59 54.2
QL06p047759 Quercus lobata HOM05D000254 ORTHO05D000165 1.7e-09 65.5 59 54.2
QL93p2004_0098 Quercus lobata HOM05D000254 ORTHO05D000165 1.7e-09 65.5 59 54.2
arahy.Tifrunner.gnm1.ann1.MKQ0V7 Arachis hypogaea HOM05D000254 ORTHO05D000165 2.2e-09 65.1 61 49.2
AUR62034202 Chenopodium quinoa HOM05D000254 ORTHO05D000165 2.2e-09 65.1 61 54.1
AUR62044130 Chenopodium quinoa HOM05D000254 ORTHO05D000165 2.2e-09 65.1 61 54.1
QL03p007125 Quercus lobata HOM05D000254 ORTHO05D000165 2.2e-09 65.1 59 52.5
CiPaw.12G009800 Carya illinoinensis HOM05D000254 ORTHO05D000165 2.9e-09 64.7 58 51.7
QL01p006403 Quercus lobata HOM05D000254 ORTHO05D000165 3.8e-09 64.3 57 52.6
QL10p049888 Quercus lobata HOM05D000254 ORTHO05D000165 5.0e-09 63.9 56 53.6
RcHm_v2.0_Chr2g0149851 Rosa chinensis HOM05D000254 ORTHO05D000165 5.0e-09 63.9 59 54.2
CiPaw.15G073900 Carya illinoinensis HOM05D000254 ORTHO05D000165 6.5e-09 63.5 62 51.6
QL08p029111 Quercus lobata HOM05D000254 ORTHO05D000165 6.5e-09 63.5 59 52.5
Atru.chr3.2972 Acer truncatum HOM05D000254 ORTHO05D000165 8.5e-09 63.2 62 51.6
Atru.chr3.2974 Acer truncatum HOM05D000254 ORTHO05D000165 8.5e-09 63.2 62 51.6
Ciclev10029809m.g Citrus clementina HOM05D000254 ORTHO05D000165 8.5e-09 63.2 58 50.0
Lj1g0005653 Lotus japonicus HOM05D000254 ORTHO05D000165 8.5e-09 63.2 58 51.7
Atru.chr8.1333 Acer truncatum HOM05D000254 ORTHO05D000165 1.1e-08 62.8 63 49.2
CANSAT35G0563 Cannabis sativa HOM05D000254 ORTHO05D000165 1.1e-08 62.8 58 50.0
Gorai.010G165800 Gossypium raimondii HOM05D000254 ORTHO05D000165 1.1e-08 62.8 55 52.7
Atru.chr4.57 Acer truncatum HOM05D000254 ORTHO05D000165 1.4e-08 62.4 59 50.8
Atru.chr2.3350 Acer truncatum HOM05D000254 ORTHO05D000165 1.9e-08 62.0 55 50.9
QL03p035115 Quercus lobata HOM05D000254 ORTHO05D000165 1.9e-08 62.0 59 50.8
RcHm_v2.0_Chr3g0466101 Rosa chinensis HOM05D000254 ORTHO05D000165 1.9e-08 62.0 60 48.3
CiPaw.01G088000 Carya illinoinensis HOM05D000254 ORTHO05D000165 2.5e-08 61.6 63 47.6
Gorai.010G125300 Gossypium raimondii HOM05D000254 ORTHO05D000165 2.5e-08 61.6 57 52.6
RcHm_v2.0_Chr3g0477911 Rosa chinensis HOM05D000254 ORTHO05D000165 2.5e-08 61.6 60 48.3
Ciclev10003735m.g Citrus clementina HOM05D000254 ORTHO05D000165 3.2e-08 61.2 59 47.5
PSO384G2322 Papaver somniferum HOM05D000254 ORTHO05D000165 3.2e-08 61.2 61 52.5
RcHm_v2.0_Chr2g0138731 Rosa chinensis HOM05D000939 ORTHO05D000745 3.2e-08 61.2 60 48.3
Atru.chr2.2838 Acer truncatum HOM05D000254 ORTHO05D000165 4.2e-08 60.8 62 51.6
arahy.Tifrunner.gnm1.ann1.2SXA0Q Arachis hypogaea HOM05D000254 ORTHO05D000165 4.2e-08 60.8 59 54.2
arahy.Tifrunner.gnm1.ann1.BZ1ILP Arachis hypogaea HOM05D000254 ORTHO05D000165 4.2e-08 60.8 59 54.2
arahy.Tifrunner.gnm1.ann1.H3AKL7 Arachis hypogaea HOM05D000254 ORTHO05D000165 4.2e-08 60.8 59 54.2
arahy.Tifrunner.gnm1.ann1.M47XWE Arachis hypogaea HOM05D000254 ORTHO05D000165 4.2e-08 60.8 59 54.2
arahy.Tifrunner.gnm1.ann1.NXX91V Arachis hypogaea HOM05D000254 ORTHO05D000165 4.2e-08 60.8 59 54.2
arahy.Tifrunner.gnm1.ann1.UVM53E Arachis hypogaea HOM05D000254 ORTHO05D000165 4.2e-08 60.8 59 54.2
arahy.Tifrunner.gnm1.ann1.X8S553 Arachis hypogaea HOM05D000254 ORTHO05D000165 4.2e-08 60.8 59 54.2
CANSAT11G0500 Cannabis sativa HOM05D000254 ORTHO05D000165 4.2e-08 60.8 58 48.3
CANSAT37G0003 Cannabis sativa HOM05D000254 ORTHO05D000165 4.2e-08 60.8 58 48.3
CANSAT37G0022 Cannabis sativa HOM05D000254 ORTHO05D000165 4.2e-08 60.8 58 48.3
CiPaw.10G130700 Carya illinoinensis HOM05D000254 ORTHO05D000165 4.2e-08 60.8 57 49.1
Lj2g0026395 Lotus japonicus HOM05D000254 ORTHO05D000165 4.2e-08 60.8 58 50.0
Thecc.03G170300 Theobroma cacao HOM05D000254 ORTHO05D000165 4.2e-08 60.8 58 51.7
Atru.chr4.1285 Acer truncatum HOM05D000254 ORTHO05D000165 5.5e-08 60.5 62 50.0
Aqoxy5G02512 Aquilegia oxysepala HOM05D000254 ORTHO05D013445 5.5e-08 60.5 51 58.8
CANSAT25G1889 Cannabis sativa HOM05D000254 ORTHO05D000165 5.5e-08 60.5 58 46.6
Ciclev10030246m.g Citrus clementina HOM05D000254 ORTHO05D000165 5.5e-08 60.5 60 46.7
Ciclev10030720m.g Citrus clementina HOM05D000254 ORTHO05D000165 5.5e-08 60.5 59 47.5
Ciclev10033602m.g Citrus clementina HOM05D000254 ORTHO05D000165 5.5e-08 60.5 59 47.5
FvH4_7g19080 Fragaria vesca HOM05D000254 ORTHO05D022695 5.5e-08 60.5 59 49.2
PSO017G5072 Papaver somniferum HOM05D000254 ORTHO05D000165 5.5e-08 60.5 61 52.5
arahy.Tifrunner.gnm1.ann1.KJ3LKA Arachis hypogaea HOM05D000254 ORTHO05D000165 7.2e-08 60.1 59 52.5
Lj1g0006278 Lotus japonicus HOM05D000254 ORTHO05D000165 7.2e-08 60.1 57 49.1
Atru.chr8.573 Acer truncatum HOM05D000254 ORTHO05D000165 9.4e-08 59.7 61 49.2
arahy.Tifrunner.gnm1.ann1.1M2RGB Arachis hypogaea HOM05D000254 ORTHO05D000165 9.4e-08 59.7 59 52.5
FvH4_4g15271 Fragaria vesca HOM05D000254 ORTHO05D000165 9.4e-08 59.7 61 50.8
AUR62039138 Chenopodium quinoa HOM05D000880 ORTHO05D043363 1.2e-07 59.3 56 48.2
PSO384G2201 Papaver somniferum HOM05D000254 ORTHO05D000165 1.2e-07 59.3 58 53.4
Ciclev10023638m.g Citrus clementina HOM05D000254 ORTHO05D000165 1.6e-07 58.9 60 48.3
ECA233G4066 Erigeron canadensis HOM05D000254 ORTHO05D000165 1.6e-07 58.9 59 50.8
CiPaw.13G123800 Carya illinoinensis HOM05D000254 ORTHO05D000165 2.1e-07 58.5 63 46.0
Ciclev10006518m.g Citrus clementina HOM05D000254 ORTHO05D000165 2.1e-07 58.5 59 45.8
Lj6g0018807 Lotus japonicus HOM05D000254 ORTHO05D000165 2.1e-07 58.5 62 50.0
QL02p026275 Quercus lobata HOM05D000254 ORTHO05D000165 2.1e-07 58.5 61 42.6
RcHm_v2.0_Chr6g0252521 Rosa chinensis HOM05D000254 ORTHO05D000165 2.1e-07 58.5 60 48.3
CiPaw.01G088200 Carya illinoinensis HOM05D000254 ORTHO05D000165 2.7e-07 58.2 62 46.8
CiPaw.03G111900 Carya illinoinensis HOM05D000254 ORTHO05D000165 2.7e-07 58.2 62 45.2
Gorai.005G086600 Gossypium raimondii HOM05D000254 ORTHO05D000165 2.7e-07 58.2 57 47.4
Lj6g0015897 Lotus japonicus HOM05D000254 ORTHO05D000165 2.7e-07 58.2 62 48.4
Medtr6g033545 Medicago truncatula HOM05D000254 ORTHO05D000165 2.7e-07 58.2 58 46.6
QL09p004329 Quercus lobata HOM05D000254 ORTHO05D000165 2.7e-07 58.2 58 46.6
CANSAT25G2475 Cannabis sativa HOM05D000254 ORTHO05D000165 3.6e-07 57.8 55 49.1
QL08p064322 Quercus lobata HOM05D000254 ORTHO05D000165 3.6e-07 57.8 59 45.8
Ciclev10017591m.g Citrus clementina HOM05D000254 ORTHO05D000165 4.6e-07 57.4 59 44.1
Atru.chr13.1503 Acer truncatum HOM05D000254 ORTHO05D000165 6.1e-07 57.0 62 48.4
PSO801G0413 Papaver somniferum HOM05D000254 ORTHO05D000165 6.1e-07 57.0 62 46.8
RcHm_v2.0_Chr1g0364331 Rosa chinensis HOM05D000254 ORTHO05D000165 6.1e-07 57.0 60 46.7
RcHm_v2.0_Chr6g0310011 Rosa chinensis HOM05D000254 ORTHO05D000165 6.1e-07 57.0 60 46.7
TWI79G1701 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 6.1e-07 57.0 59 45.8
arahy.Tifrunner.gnm1.ann1.624CI0 Arachis hypogaea HOM05D000254 ORTHO05D000165 7.9e-07 56.6 51 56.9
arahy.Tifrunner.gnm1.ann1.R9DJ65 Arachis hypogaea HOM05D000254 ORTHO05D000165 7.9e-07 56.6 51 56.9
CiPaw.08G180800 Carya illinoinensis HOM05D000254 ORTHO05D000165 7.9e-07 56.6 57 49.1
Ciclev10033953m.g Citrus clementina HOM05D000254 ORTHO05D000165 7.9e-07 56.6 60 41.7
Gorai.004G143400 Gossypium raimondii HOM05D000254 ORTHO05D000165 7.9e-07 56.6 57 49.1
PSO170G2009 Papaver somniferum HOM05D000254 ORTHO05D000165 7.9e-07 56.6 61 50.8
PSO675G3937 Papaver somniferum HOM05D000254 ORTHO05D000165 7.9e-07 56.6 61 50.8
RcHm_v2.0_Chr5g0045381 Rosa chinensis HOM05D000254 ORTHO05D000165 7.9e-07 56.6 62 43.5
arahy.Tifrunner.gnm1.ann1.H0N4P0 Arachis hypogaea HOM05D000254 ORTHO05D000165 1.0e-06 56.2 55 47.3
arahy.Tifrunner.gnm1.ann1.KPKP47 Arachis hypogaea HOM05D000254 ORTHO05D000165 1.0e-06 56.2 59 49.2
ECA236G2515 Erigeron canadensis HOM05D000254 ORTHO05D000165 1.0e-06 56.2 62 46.8
QL12p001316 Quercus lobata HOM05D000254 ORTHO05D000165 1.0e-06 56.2 60 50.0
TPR.G9900 Trifolium pratense HOM05D000254 ORTHO05D000165 1.0e-06 56.2 54 50.0
Ah.06g188330 Amaranthus hybridus HOM05D000254 ORTHO05D000165 1.4e-06 55.8 62 41.9
CiPaw.01G080100 Carya illinoinensis HOM05D000254 ORTHO05D000165 1.4e-06 55.8 50 50.0
Gorai.009G400300 Gossypium raimondii HOM05D000254 ORTHO05D000165 1.4e-06 55.8 57 47.4
MapolyY_B0044 Marchantia polymorpha HOM05D000254 ORTHO05D000165 1.4e-06 55.8 62 41.9
RcHm_v2.0_Chr5g0023801 Rosa chinensis HOM05D000254 ORTHO05D000165 1.4e-06 55.8 60 46.7
RcHm_v2.0_Chr6g0263361 Rosa chinensis HOM05D012972 ORTHO05D013445 1.4e-06 55.8 51 47.1
TPR.G29327 Trifolium pratense HOM05D000254 ORTHO05D000165 1.4e-06 55.8 52 51.9
TWI18G1257 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 1.4e-06 55.8 59 44.1
PSO339G4923 Papaver somniferum HOM05D000254 ORTHO05D000165 1.8e-06 55.5 61 47.5
TPR.G31081 Trifolium pratense HOM05D001466 ORTHO05D001452 1.8e-06 55.5 59 45.8
CiPaw.08G109200 Carya illinoinensis HOM05D000254 ORTHO05D000165 2.3e-06 55.1 58 46.6
RcHm_v2.0_Chr4g0390161 Rosa chinensis HOM05D000254 ORTHO05D000165 2.3e-06 55.1 60 46.7
Ah.00g000220 Amaranthus hybridus HOM05D000254 ORTHO05D000165 3.0e-06 54.7 62 43.5
Ah.08g211160 Amaranthus hybridus HOM05D000254 ORTHO05D000165 3.0e-06 54.7 62 43.5
Ah.11g042400 Amaranthus hybridus HOM05D000254 ORTHO05D000165 3.0e-06 54.7 62 43.5
ECA246G2420 Erigeron canadensis HOM05D000254 ORTHO05D000165 3.0e-06 54.7 62 46.8
RcHm_v2.0_Chr3g0486441 Rosa chinensis HOM05D000254 ORTHO05D000165 3.0e-06 54.7 61 41.0
RcHm_v2.0_Chr4g0392191 Rosa chinensis HOM05D012972 ORTHO05D013445 3.0e-06 54.7 61 45.9
PGSC0003DMG400000259 Solanum tuberosum HOM05D000254 ORTHO05D000165 3.0e-06 54.7 62 45.2
Atru.chr6.898 Acer truncatum HOM05D000254 ORTHO05D000165 3.9e-06 54.3 62 48.4
Ciclev10023524m.g Citrus clementina HOM05D000254 ORTHO05D000165 3.9e-06 54.3 62 40.3
Haze_21996 Corylus avellana HOM05D000150 ORTHO05D000108 3.9e-06 54.3 57 47.4
FAN11G2395 Fragaria x ananassa HOM05D000001 ORTHO05D000003 3.9e-06 54.3 45 53.3
Glyma.14G133900 Glycine max HOM05D000254 ORTHO05D000165 3.9e-06 54.3 50 48.0
CARHR261190 Cardamine hirsuta HOM05D000254 ORTHO05D000165 5.1e-06 53.9 62 41.9
PSO017G5333 Papaver somniferum HOM05D000254 ORTHO05D000165 5.1e-06 53.9 60 45.0
PSO017G5594 Papaver somniferum HOM05D000254 ORTHO05D000165 5.1e-06 53.9 60 45.0
PSO063G3999 Papaver somniferum HOM05D000254 ORTHO05D000165 5.1e-06 53.9 60 45.0
PSO675G5959 Papaver somniferum HOM05D000254 ORTHO05D000165 5.1e-06 53.9 60 45.0
PSO782G3494 Papaver somniferum HOM05D000254 ORTHO05D000165 5.1e-06 53.9 60 45.0
TAR079G0001 Trochodendron aralioides HOM05D000254 ORTHO05D000165 5.1e-06 53.9 62 40.3
arahy.Tifrunner.gnm1.ann1.1K58IL Arachis hypogaea HOM05D000254 ORTHO05D000165 6.7e-06 53.5 53 50.9
CSS0014803 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 6.7e-06 53.5 62 40.3
FAN26G2626 Fragaria x ananassa HOM05D016093 ORTHO05D013445 6.7e-06 53.5 57 45.6
CSS0010411 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 8.8e-06 53.1 62 40.3
CSS0016186 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 8.8e-06 53.1 62 43.5
CSS0016798 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 8.8e-06 53.1 62 40.3
CiPaw.06G104500 Carya illinoinensis HOM05D000254 ORTHO05D000165 8.8e-06 53.1 51 51.0
Ciclev10027245m.g Citrus clementina HOM05D000254 ORTHO05D000165 8.8e-06 53.1 60 45.0
RcHm_v2.0_Chr2g0097391 Rosa chinensis HOM05D000254 ORTHO05D000165 8.8e-06 53.1 60 45.0


User provided reference genes

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