Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu016701.2 Olea europaea HOM05D001459 ORTHO05D001359 4.7e-64 247.7 123 100.0
Oeu027098.1 Olea europaea HOM05D001459 ORTHO05D001359 1.6e-32 142.9 104 74.0
Dinv25272 Davidia involucrata HOM05D001459 ORTHO05D001359 2.7e-27 125.6 102 68.6
Solyc08g005290.3 Solanum lycopersicum HOM05D001459 ORTHO05D001359 1.3e-26 123.2 102 63.7
Sopen08g001310 Solanum pennellii HOM05D001459 ORTHO05D001359 1.3e-26 123.2 102 63.7
PGSC0003DMG400018469 Solanum tuberosum HOM05D001459 ORTHO05D001359 1.3e-26 123.2 102 63.7
Oeu031080.1 Olea europaea HOM05D001459 ORTHO05D001359 1.5e-25 119.8 99 67.7
arahy.Tifrunner.gnm1.ann1.AFV1R8 Arachis hypogaea HOM05D001459 ORTHO05D001359 7.4e-25 117.5 108 60.2
arahy.Tifrunner.gnm1.ann1.G7EQ73 Arachis hypogaea HOM05D001459 ORTHO05D001359 7.4e-25 117.5 108 60.2
CAN.G137.28 Capsicum annuum HOM05D001459 ORTHO05D001359 7.4e-25 117.5 102 60.8
GSVIVG01013053001 Vitis vinifera HOM05D001459 ORTHO05D001359 1.3e-24 116.7 108 62.0
Actinidia14776 Actinidia chinensis HOM05D001459 ORTHO05D001359 3.7e-24 115.2 108 61.1
Dinv29008 Davidia involucrata HOM05D001459 ORTHO05D001359 3.7e-24 115.2 101 65.3
Cc08_g03540 Coffea canephora HOM05D001459 ORTHO05D001359 6.3e-24 114.4 105 60.0
Psat0s1431g0080 Pisum sativum HOM05D001459 ORTHO05D001359 6.3e-24 114.4 108 59.3
Atru.chr6.1535 Acer truncatum HOM05D001459 ORTHO05D001359 1.8e-23 112.8 108 60.2
CANSAT21G2600 Cannabis sativa HOM05D001459 ORTHO05D001359 4.1e-23 111.7 110 60.0
CiPaw.12G068800 Carya illinoinensis HOM05D001459 ORTHO05D001359 5.3e-23 111.3 108 57.4
Lalb_Chr09g0325441 Lupinus albus HOM05D001459 ORTHO05D001359 5.3e-23 111.3 108 56.5
Peaxi162Scf00052g00335 Petunia axillaris HOM05D001459 ORTHO05D001359 1.2e-22 110.2 103 58.3
Nitab4.5_0000556g0270 Nicotiana tabacum HOM05D001459 ORTHO05D001359 2.0e-22 109.4 106 58.5
TPR.G10365 Trifolium pratense HOM05D001459 ORTHO05D001359 2.0e-22 109.4 108 57.4
TPR.G28598 Trifolium pratense HOM05D001459 ORTHO05D001359 2.0e-22 109.4 108 56.5
Prupe.5G027000 Prunus persica HOM05D001459 ORTHO05D001359 2.6e-22 109.0 108 59.3
Thecc.03G311000 Theobroma cacao HOM05D001459 ORTHO05D001359 2.6e-22 109.0 108 57.4
Lalb_Chr05g0215701 Lupinus albus HOM05D001459 ORTHO05D001359 3.4e-22 108.6 108 55.6
Rhsim07G0132900 Rhododendron simsii HOM05D001459 ORTHO05D001359 4.5e-22 108.2 100 59.0
CSS0041697 Camellia sinensis var. sinensis HOM05D001459 ORTHO05D001359 5.9e-22 107.8 104 59.6
CSS0044644 Camellia sinensis var. sinensis HOM05D001459 ORTHO05D001359 5.9e-22 107.8 97 59.8
vmacro14206 Vaccinium macrocarpon HOM05D001459 ORTHO05D001359 2.2e-21 105.9 98 59.2
MD06G1026900 Malus domestica HOM05D001459 ORTHO05D001359 2.9e-21 105.5 108 55.6
Manes.15G191900 Manihot esculenta HOM05D001459 ORTHO05D001359 5.0e-21 104.8 108 53.7
Manes.15G192000 Manihot esculenta HOM05D001459 ORTHO05D001359 6.5e-21 104.4 108 54.6
Solyc08g076100.4 Solanum lycopersicum HOM05D001459 ORTHO05D001359 6.5e-21 104.4 106 57.5
Lalb_Chr16g0381001 Lupinus albus HOM05D001459 ORTHO05D001359 8.5e-21 104.0 108 53.7
Lj2A229T41 Lonicera japonica HOM05D001459 ORTHO05D001359 1.1e-20 103.6 108 58.3
QL12p001122 Quercus lobata HOM05D001459 ORTHO05D001359 1.1e-20 103.6 106 52.8
CAN.G773.31 Capsicum annuum HOM05D001459 ORTHO05D001359 1.4e-20 103.2 106 58.5
Duzib068G0264 Durio zibethinus HOM05D001459 ORTHO05D001359 1.4e-20 103.2 108 57.4
Sopen08g024750 Solanum pennellii HOM05D001459 ORTHO05D001359 1.4e-20 103.2 106 57.5
Ciclev10001333m.g Citrus clementina HOM05D001459 ORTHO05D001359 1.9e-20 102.8 108 56.5
Glyma.01G013600 Glycine max HOM05D001459 ORTHO05D001359 1.9e-20 102.8 108 54.6
Duzib084G0813 Durio zibethinus HOM05D001459 ORTHO05D001359 2.5e-20 102.4 108 56.5
TWI81G0099 Tripterygium wilfordii HOM05D001459 ORTHO05D001359 4.2e-20 101.7 94 59.6
Ca_22546_v3 Cicer arietinum L. HOM05D005120 ORTHO05D006174 9.3e-20 100.5 108 57.4
Sabra01G0105200 Salix brachista HOM05D001459 ORTHO05D001359 9.3e-20 100.5 107 54.2
MSTRG.25695 Avicennia marina HOM05D001459 ORTHO05D001359 1.6e-19 99.8 104 58.7
CiPaw.11G098900 Carya illinoinensis HOM05D001459 ORTHO05D001359 1.6e-19 99.8 112 50.9
Nitab4.5_0000179g0100 Nicotiana tabacum HOM05D001459 ORTHO05D001359 1.6e-19 99.8 97 55.7
Ca_25167_v3 Cicer arietinum L. HOM05D001459 ORTHO05D001359 2.7e-19 99.0 108 54.6
Hma1.2p1_0870F.1_g230920 Hydrangea macrophylla HOM05D001459 ORTHO05D001359 3.6e-19 98.6 108 57.4
Nitab4.5_0004528g0040 Nicotiana tabacum HOM05D001459 ORTHO05D001359 3.6e-19 98.6 93 59.1
Peaxi162Scf00045g00325 Petunia axillaris HOM05D001459 ORTHO05D001359 3.6e-19 98.6 97 56.7
Glyma.09G208500 Glycine max HOM05D001459 ORTHO05D001359 4.6e-19 98.2 108 52.8
Lj2g0012038 Lotus japonicus HOM05D001459 ORTHO05D001359 7.9e-19 97.4 108 53.7
Medtr5g028850 Medicago truncatula HOM05D001459 ORTHO05D001359 1.0e-18 97.1 108 51.9
Migut.E01317 Erythranthe guttata HOM05D001459 ORTHO05D001359 1.8e-18 96.3 102 52.9
PGR042G1020 Punica granatum HOM05D001459 ORTHO05D001359 1.8e-18 96.3 107 53.3
Glyma.08G265600 Glycine max HOM05D001459 ORTHO05D001359 2.3e-18 95.9 108 51.9
Migut.A00608 Erythranthe guttata HOM05D001459 ORTHO05D001359 3.0e-18 95.5 104 58.7
Hma1.2p1_1569F.1_g291140 Hydrangea macrophylla HOM05D001459 ORTHO05D001359 3.0e-18 95.5 106 56.6
Hma1.2p1_1645F.1_g295350 Hydrangea macrophylla HOM05D001459 ORTHO05D001359 3.0e-18 95.5 106 56.6
Hma1.2p1_3736F.1_g337430 Hydrangea macrophylla HOM05D001459 ORTHO05D001359 3.0e-18 95.5 108 56.5
Potri.003G097600 Populus trichocarpa HOM05D001459 ORTHO05D001359 5.1e-18 94.7 107 50.5
COL.COLO4_16931 Corchorus olitorius HOM05D001459 ORTHO05D001359 6.7e-18 94.4 108 54.6
Rhsim07G0133000 Rhododendron simsii HOM05D001459 ORTHO05D001359 6.7e-18 94.4 107 51.4
Medtr8g070820 Medicago truncatula HOM05D001459 ORTHO05D001359 1.5e-17 93.2 106 51.9
TWI15G0913 Tripterygium wilfordii HOM05D001459 ORTHO05D001359 1.5e-17 93.2 83 60.2
Nitab4.5_0000301g0070 Nicotiana tabacum HOM05D001459 ORTHO05D001359 1.9e-17 92.8 106 53.8
Glyma.16G095200 Glycine max HOM05D001459 ORTHO05D001359 3.3e-17 92.0 108 54.6
Phvul.002G136000 Phaseolus vulgaris HOM05D001459 ORTHO05D001359 4.3e-17 91.7 107 51.4
SGA_v2.0_scaffold96G29039 Striga asiatica HOM05D001459 ORTHO05D001359 5.7e-17 91.3 106 53.8
Hund14381 Selenicereus undatus HOM05D001459 ORTHO05D001359 1.7e-16 89.7 107 48.6
TPR.G6179 Trifolium pratense HOM05D005120 ORTHO05D006174 1.7e-16 89.7 109 53.2
unitig_699.g19757 Utricularia gibba HOM05D001459 ORTHO05D001359 1.7e-16 89.7 108 50.9
Gorai.003G185700 Gossypium raimondii HOM05D001459 ORTHO05D001359 2.8e-16 89.0 108 53.7
AUR62007361 Chenopodium quinoa HOM05D001459 ORTHO05D001359 3.7e-16 88.6 97 50.5
MELO3C013820.2 Cucumis melo HOM05D001459 ORTHO05D001359 4.8e-16 88.2 107 52.3
DCAR_008218 Daucus carota HOM05D001459 ORTHO05D001359 4.8e-16 88.2 114 50.9
Gohir.A03G000030 Gossypium hirsutum HOM05D001459 ORTHO05D001359 4.8e-16 88.2 108 52.8
Sabra03G0066100 Salix brachista HOM05D001515 ORTHO05D001359 4.8e-16 88.2 107 50.5
EL10Ac5g12000 Beta vulgaris HOM05D001459 ORTHO05D001359 6.3e-16 87.8 106 50.9
Phvul.003G273900 Phaseolus vulgaris HOM05D001459 ORTHO05D001359 6.3e-16 87.8 108 50.9
Sc01g0006020 Simmondsia chinensis HOM05D001459 ORTHO05D001359 6.3e-16 87.8 109 51.4
Gohir.D03G176500 Gossypium hirsutum HOM05D001459 ORTHO05D001359 8.2e-16 87.4 108 52.8
PSO782G4644 Papaver somniferum HOM05D001459 ORTHO05D001359 8.2e-16 87.4 100 51.0
RcHm_v2.0_Chr7g0212131 Rosa chinensis HOM05D001459 ORTHO05D001359 8.2e-16 87.4 108 50.9
Aqoxy3G02160 Aquilegia oxysepala HOM05D001459 ORTHO05D001359 1.1e-15 87.0 96 55.2
Eucgr.E00223 Eucalyptus grandis HOM05D001459 ORTHO05D001359 1.4e-15 86.7 90 57.8
CSS0040681 Camellia sinensis var. sinensis HOM05D001459 ORTHO05D001359 1.8e-15 86.3 92 56.5
CsaV3_3G001310 Cucumis sativus L. HOM05D001459 ORTHO05D001359 1.8e-15 86.3 107 51.4
Lj4g0008832 Lotus japonicus HOM05D001459 ORTHO05D001359 1.8e-15 86.3 103 53.4
FvH4_5g23200 Fragaria vesca HOM05D001459 ORTHO05D001359 2.4e-15 85.9 108 50.0
FAN18G3381 Fragaria x ananassa HOM05D001459 ORTHO05D001359 2.4e-15 85.9 108 50.0
FAN18G3520 Fragaria x ananassa HOM05D001459 ORTHO05D001359 2.4e-15 85.9 108 50.0
Ah.07g201060 Amaranthus hybridus HOM05D001459 ORTHO05D001359 3.1e-15 85.5 108 48.1
Duzib205G1077 Durio zibethinus HOM05D001459 ORTHO05D001359 4.1e-15 85.1 108 50.9
Lj8A322G33 Lonicera japonica HOM05D001459 ORTHO05D001359 4.1e-15 85.1 106 51.9
Hund11171 Selenicereus undatus HOM05D001459 ORTHO05D001359 4.1e-15 85.1 108 49.1
DCAR_004268 Daucus carota HOM05D001459 ORTHO05D001359 5.3e-15 84.7 107 51.4
FAN04G0112 Fragaria x ananassa HOM05D001459 ORTHO05D001359 5.3e-15 84.7 107 50.5
Gohir.A08G153300 Gossypium hirsutum HOM05D001459 ORTHO05D001359 5.3e-15 84.7 87 55.2
Gohir.D08G174200 Gossypium hirsutum HOM05D001459 ORTHO05D001359 5.3e-15 84.7 87 55.2
Gorai.004G181900 Gossypium raimondii HOM05D001459 ORTHO05D001359 5.3e-15 84.7 87 55.2
FAN13G2632 Fragaria x ananassa HOM05D001459 ORTHO05D001359 6.9e-15 84.3 108 50.0
Psat4g111720 Pisum sativum HOM05D001459 ORTHO05D001359 6.9e-15 84.3 82 58.5
VMungo0251G1353 Vigna mungo HOM05D001459 ORTHO05D001359 6.9e-15 84.3 106 46.2
Cfa012529 Carpinus fangiana HOM05D001459 ORTHO05D001359 9.1e-15 84.0 108 51.9
PSO063G5354 Papaver somniferum HOM05D001459 ORTHO05D001359 9.1e-15 84.0 100 51.0
AUR62018627 Chenopodium quinoa HOM05D001459 ORTHO05D001359 1.2e-14 83.6 96 51.0
ClCG09G011600 Citrullus lanatus HOM05D001459 ORTHO05D001359 1.2e-14 83.6 104 48.1
FAN08G0121 Fragaria x ananassa HOM05D001459 ORTHO05D001359 1.2e-14 83.6 111 48.6
SGA_v2.0_scaffold89G27434 Striga asiatica HOM05D001459 ORTHO05D001359 1.2e-14 83.6 103 52.4
Nn1g01860 Nelumbo nucifera HOM05D001459 ORTHO05D001359 2.0e-14 82.8 101 56.4
Haze_08134 Corylus avellana HOM05D001459 ORTHO05D001359 2.6e-14 82.4 108 50.9
CsaV3_3G048810 Cucumis sativus L. HOM05D001459 ORTHO05D001359 2.6e-14 82.4 104 48.1
Potri.001G136000 Populus trichocarpa HOM05D001459 ORTHO05D001359 2.6e-14 82.4 76 57.9
MELO3C003443.2 Cucumis melo HOM05D001459 ORTHO05D001359 3.4e-14 82.0 104 48.1
VMungo1215G1612 Vigna mungo HOM05D001459 ORTHO05D001359 4.5e-14 81.6 107 47.7
Ah.12g055550 Amaranthus hybridus HOM05D001459 ORTHO05D001359 5.9e-14 81.3 75 58.7
MD16G1279200 Malus domestica HOM05D001459 ORTHO05D001359 2.2e-13 79.3 82 52.4
Sed0016022 Sechium edule HOM05D001459 ORTHO05D001359 2.2e-13 79.3 98 45.9
AL4G31580 Arabidopsis lyrata HOM05D001459 ORTHO05D001359 2.9e-13 79.0 95 49.5
ClCG10G001250 Citrullus lanatus HOM05D001459 ORTHO05D001359 2.9e-13 79.0 96 52.1
Thhalv10016740m.g Eutrema salsugineum HOM05D001459 ORTHO05D001359 3.8e-13 78.6 100 51.0
Nn3g19377 Nelumbo nucifera HOM05D001459 ORTHO05D001359 3.8e-13 78.6 100 53.0
AT2G35530 Arabidopsis thaliana HOM05D001459 ORTHO05D001359 5.0e-13 78.2 95 49.5
TAR366G0001 Trochodendron aralioides HOM05D001459 ORTHO05D001359 3.2e-12 75.5 98 50.0
Sp4g17740 Schrenkiella parvula HOM05D001459 ORTHO05D001359 4.2e-12 75.1 99 47.5
CARHR129700 Cardamine hirsuta HOM05D001459 ORTHO05D001359 5.5e-12 74.7 94 51.1
HanXRQChr03g0081571 Helianthus annuus HOM05D001459 ORTHO05D001359 5.5e-12 74.7 101 48.5
unitig_52.g17230 Utricularia gibba HOM05D001459 ORTHO05D001359 7.2e-12 74.3 109 45.9
Actinidia24577 Actinidia chinensis HOM05D001459 ORTHO05D001359 1.2e-11 73.6 93 49.5
Sed0005581 Sechium edule HOM05D001459 ORTHO05D001359 1.2e-11 73.6 107 51.4
Lalb_Chr09g0334641 Lupinus albus HOM05D001459 ORTHO05D001359 2.1e-11 72.8 106 49.1
ECA240G2874 Erigeron canadensis HOM05D001459 ORTHO05D001359 3.6e-11 72.0 99 46.5
Carub.0004s1722 Capsella rubella HOM05D001459 ORTHO05D001359 7.9e-11 70.9 87 50.6
Rhsim11G0032400 Rhododendron simsii HOM05D001459 ORTHO05D001359 1.4e-10 70.1 93 47.3
RhsimUnG0059100 Rhododendron simsii HOM05D001459 ORTHO05D001359 1.4e-10 70.1 87 48.3
Aa31LG9G15510 Aethionema arabicum HOM05D001459 ORTHO05D001359 3.9e-10 68.6 95 45.3
BcaC01g05727 Brassica carinata HOM05D001459 ORTHO05D001359 3.9e-10 68.6 100 46.0
MBI04_g20972_MAGBIO Magnolia biondii HOM05D001459 ORTHO05D001359 6.7e-10 67.8 86 47.7
A03p19550 Brassica napus HOM05D001459 ORTHO05D001359 1.5e-09 66.6 99 45.5
Sed0017623 Sechium edule HOM05D001459 ORTHO05D001359 2.6e-09 65.9 108 44.4
THA.LOC104812761 Tarenaya hassleriana HOM05D001459 ORTHO05D001359 4.4e-09 65.1 96 44.8
C03p22790 Brassica napus HOM05D001459 ORTHO05D001359 1.7e-08 63.2 90 46.7
ATR0829G146 Amborella trichopoda HOM05D001459 ORTHO05D001359 3.7e-08 62.0 102 43.1
HanXRQChr03g0081421 Helianthus annuus HOM05D001459 ORTHO05D001359 8.2e-08 60.8 90 44.4
MBI13_g04497_MAGBIO Magnolia biondii HOM05D001459 ORTHO05D001359 8.2e-08 60.8 87 42.5
BolC3t14678H Brassica oleracea HOM05D001459 ORTHO05D001359 2.4e-07 59.3 100 44.0
Os02g0128200 Oryza sativa ssp. japonica HOM05D001459 ORTHO05D001359 2.4e-07 59.3 72 41.7
HPP92_009017 Vanilla planifolia HOM05D001459 ORTHO05D001359 3.1e-07 58.9 104 35.6
BraA05t19961Z Brassica rapa HOM05D001459 ORTHO05D001359 5.3e-07 58.2 84 46.4
AT1G32150 Arabidopsis thaliana HOM05D001459 ORTHO05D001359 7.0e-07 57.8 95 42.1
BcaB02g09421 Brassica carinata HOM05D001459 ORTHO05D001359 9.1e-07 57.4 60 56.7
BolC4t22914H Brassica oleracea HOM05D001459 ORTHO05D001359 1.2e-06 57.0 81 48.1
CDE06G2237 Ceratophyllum demersum HOM05D001459 ORTHO05D001359 1.2e-06 57.0 99 41.4
Lsat_1_v5_gn_5_62340 Lactuca sativa HOM05D001459 ORTHO05D001359 1.2e-06 57.0 94 45.7
CDE07G1225 Ceratophyllum demersum HOM05D001459 ORTHO05D001359 2.0e-06 56.2 99 40.4
HPP92_012822 Vanilla planifolia HOM05D001459 ORTHO05D001359 2.6e-06 55.8 108 38.9
ATR0021G037 Amborella trichopoda HOM05D001459 ORTHO05D001359 3.4e-06 55.5 88 34.1
BcaC02g11657 Brassica carinata HOM05D001459 ORTHO05D001359 3.4e-06 55.5 80 47.5
A05p10210 Brassica napus HOM05D001459 ORTHO05D001359 3.4e-06 55.5 80 47.5
C04p12660 Brassica napus HOM05D001459 ORTHO05D001359 3.4e-06 55.5 80 47.5
AL1G46230 Arabidopsis lyrata HOM05D001459 ORTHO05D001359 4.5e-06 55.1 56 55.4
Carub.0001s3047 Capsella rubella HOM05D001459 ORTHO05D001359 5.9e-06 54.7 99 40.4
Zm00001eb133640 Zea mays HOM05D001459 ORTHO05D001359 5.9e-06 54.7 90 36.7
Nn4g24488 Nelumbo nucifera HOM05D001459 ORTHO05D001359 7.7e-06 54.3 50 50.0


User provided reference genes

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