Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu016680.1 Olea europaea HOM05D004378 ORTHO05D005269 2.2e-191 672.2 345 100.0
Oeu001481.2 Olea europaea HOM05D004378 ORTHO05D005269 7.3e-163 577.4 328 88.4
CSS0043718 Camellia sinensis var. sinensis HOM05D004378 ORTHO05D005269 8.4e-143 510.8 330 76.7
Dinv22174 Davidia involucrata HOM05D004378 ORTHO05D005269 8.4e-143 510.8 341 76.2
Cc01_g04470 Coffea canephora HOM05D004378 ORTHO05D005269 2.4e-142 509.2 343 75.5
Migut.D00605 Erythranthe guttata HOM05D004378 ORTHO05D005269 5.5e-142 508.1 330 77.9
Nn2g15350 Nelumbo nucifera HOM05D004378 ORTHO05D005269 4.6e-141 505.0 333 75.7
Rhsim13G0220800 Rhododendron simsii HOM05D004378 ORTHO05D005269 6.0e-141 504.6 329 76.0
Actinidia16337 Actinidia chinensis HOM05D004378 ORTHO05D005269 1.0e-140 503.8 330 75.2
Migut.N02321 Erythranthe guttata HOM05D004378 ORTHO05D005269 1.1e-139 500.4 334 76.0
COL.COLO4_07579 Corchorus olitorius HOM05D004378 ORTHO05D005269 7.4e-139 497.7 317 78.2
Peaxi162Scf00004g02527 Petunia axillaris HOM05D004378 ORTHO05D005269 1.6e-138 496.5 336 76.2
MSTRG.18430 Avicennia marina HOM05D004378 ORTHO05D005269 2.8e-138 495.7 317 78.9
Gohir.A08G013900 Gossypium hirsutum HOM05D004378 ORTHO05D005269 2.8e-138 495.7 322 75.8
Gorai.004G019800 Gossypium raimondii HOM05D004378 ORTHO05D005269 2.8e-138 495.7 322 75.8
Gohir.D08G024400 Gossypium hirsutum HOM05D004378 ORTHO05D005269 8.1e-138 494.2 322 75.5
GSVIVG01025251001 Vitis vinifera HOM05D004378 ORTHO05D005269 1.1e-137 493.8 318 75.5
Atru.chr3.2709 Acer truncatum HOM05D004378 ORTHO05D005269 2.4e-137 492.7 332 76.2
DCAR_030049 Daucus carota HOM05D004378 ORTHO05D005269 2.4e-137 492.7 339 72.6
Thecc.09G234500 Theobroma cacao HOM05D004378 ORTHO05D005269 4.0e-137 491.9 317 77.3
Actinidia06909 Actinidia chinensis HOM05D004378 ORTHO05D005269 5.3e-137 491.5 312 76.6
Haze_23143 Corylus avellana HOM05D004378 ORTHO05D005269 2.0e-136 489.6 333 74.8
TWI60G1037 Tripterygium wilfordii HOM05D004378 ORTHO05D005269 2.0e-136 489.6 333 74.5
Hma1.2p1_0368F.1_g137300 Hydrangea macrophylla HOM05D004378 ORTHO05D005269 2.6e-136 489.2 301 81.4
SGA_v2.0_scaffold247G44883 Striga asiatica HOM05D004378 ORTHO05D005269 2.6e-136 489.2 330 75.2
Nn7g36225 Nelumbo nucifera HOM05D004378 ORTHO05D005269 3.4e-136 488.8 331 73.7
Duzib150G1120 Durio zibethinus HOM05D004378 ORTHO05D005269 5.8e-136 488.0 299 79.6
Duzib168G0314 Durio zibethinus HOM05D004378 ORTHO05D005269 5.8e-136 488.0 317 75.4
PGSC0003DMG400007339 Solanum tuberosum HOM05D004378 ORTHO05D005269 5.8e-136 488.0 330 75.2
Medtr3g061490 Medicago truncatula HOM05D004378 ORTHO05D005269 1.0e-135 487.3 338 72.5
Ciclev10015746m.g Citrus clementina HOM05D004378 ORTHO05D005269 1.3e-135 486.9 326 77.3
arahy.Tifrunner.gnm1.ann1.B78H3K Arachis hypogaea HOM05D004378 ORTHO05D005269 1.7e-135 486.5 346 71.4
Cfa009777 Carpinus fangiana HOM05D004378 ORTHO05D005269 1.7e-135 486.5 336 73.8
arahy.Tifrunner.gnm1.ann1.YL0VRD Arachis hypogaea HOM05D004378 ORTHO05D005269 2.2e-135 486.1 346 71.4
TAR369G0513 Trochodendron aralioides HOM05D004378 ORTHO05D005269 4.9e-135 485.0 315 76.2
Manes.06G163800 Manihot esculenta HOM05D004378 ORTHO05D005269 1.1e-134 483.8 332 73.2
Lj6g0003660 Lotus japonicus HOM05D004378 ORTHO05D005269 2.5e-134 482.6 332 72.9
Ca_14874_v3 Cicer arietinum L. HOM05D004378 ORTHO05D005269 4.2e-134 481.9 339 72.3
Potri.009G052800 Populus trichocarpa HOM05D004378 ORTHO05D005269 5.5e-134 481.5 329 74.8
Sopen11g025430 Solanum pennellii HOM05D004378 ORTHO05D005269 5.5e-134 481.5 330 74.8
CiPaw.13G159900 Carya illinoinensis HOM05D004378 ORTHO05D005269 7.1e-134 481.1 320 77.5
Peaxi162Scf00032g00327 Petunia axillaris HOM05D004378 ORTHO05D005269 1.2e-133 480.3 330 73.9
CiPaw.14G118500 Carya illinoinensis HOM05D004378 ORTHO05D005269 3.5e-133 478.8 328 74.7
CANSAT54G1532 Cannabis sativa HOM05D004378 ORTHO05D005269 1.0e-132 477.2 334 72.8
FAN11G1994 Fragaria x ananassa HOM05D004378 ORTHO05D005269 1.0e-132 477.2 341 72.4
unitig_27.g24995 Utricularia gibba HOM05D004378 ORTHO05D005269 1.8e-132 476.5 336 72.3
FAN25G2048 Fragaria x ananassa HOM05D004378 ORTHO05D005269 2.3e-132 476.1 341 72.4
Lalb_Chr18g0050451 Lupinus albus HOM05D004378 ORTHO05D005269 2.3e-132 476.1 328 74.7
unitig_699.g19136 Utricularia gibba HOM05D004378 ORTHO05D005269 2.3e-132 476.1 338 72.5
Lalb_Chr15g0082531 Lupinus albus HOM05D004378 ORTHO05D005269 3.9e-132 475.3 332 72.6
RcHm_v2.0_Chr5g0052271 Rosa chinensis HOM05D004378 ORTHO05D005269 3.9e-132 475.3 337 72.4
Nitab4.5_0000023g0700 Nicotiana tabacum HOM05D004378 ORTHO05D005269 5.1e-132 474.9 340 70.9
Prupe.4G250000 Prunus persica HOM05D004378 ORTHO05D005269 5.1e-132 474.9 329 72.9
QL01p004640 Quercus lobata HOM05D004378 ORTHO05D005269 5.1e-132 474.9 330 74.5
FAN16G3181 Fragaria x ananassa HOM05D004378 ORTHO05D005269 8.7e-132 474.2 332 72.6
Glyma.08G336000 Glycine max HOM05D004378 ORTHO05D005269 8.7e-132 474.2 332 72.6
TPR.G14725 Trifolium pratense HOM05D004378 ORTHO05D005269 8.7e-132 474.2 332 71.7
TWI34G1172 Tripterygium wilfordii HOM05D004378 ORTHO05D005269 1.1e-131 473.8 341 70.7
CSS0001002 Camellia sinensis var. sinensis HOM05D004378 ORTHO05D005269 1.5e-131 473.4 329 73.3
Potri.001G257500 Populus trichocarpa HOM05D004378 ORTHO05D005269 1.5e-131 473.4 332 72.6
CAN.G1204.2 Capsicum annuum HOM05D004378 ORTHO05D005269 2.5e-131 472.6 331 72.8
Sabra16G0157500 Salix brachista HOM05D004378 ORTHO05D005269 7.4e-131 471.1 332 72.3
FvH4_3g28770 Fragaria vesca HOM05D004378 ORTHO05D005269 1.3e-130 470.3 340 71.5
SGA_v2.0_scaffold8G04586 Striga asiatica HOM05D004378 ORTHO05D005269 2.8e-130 469.2 316 74.1
VMungo0540G0714 Vigna mungo HOM05D004378 ORTHO05D005269 2.8e-130 469.2 339 71.7
MD11G1192300 Malus domestica HOM05D004378 ORTHO05D005269 4.8e-130 468.4 330 73.9
Nitab4.5_0002786g0020 Nicotiana tabacum HOM05D004378 ORTHO05D005269 8.2e-130 467.6 345 69.3
Eucgr.J00761 Eucalyptus grandis HOM05D004378 ORTHO05D005269 1.1e-129 467.2 335 72.2
Sed0026402 Sechium edule HOM05D004378 ORTHO05D005269 1.1e-129 467.2 332 72.0
PGSC0003DMG400010703 Solanum tuberosum HOM05D004378 ORTHO05D005269 1.1e-129 467.2 340 71.8
HanXRQChr13g0401501 Helianthus annuus HOM05D004378 ORTHO05D005269 2.4e-129 466.1 330 72.7
ClCG03G013210 Citrullus lanatus HOM05D004378 ORTHO05D005269 9.0e-129 464.2 332 74.1
Nitab4.5_0001587g0030 Nicotiana tabacum HOM05D004378 ORTHO05D005269 3.4e-128 462.2 324 73.8
ECA233G1578 Erigeron canadensis HOM05D004378 ORTHO05D005269 5.9e-128 461.5 327 70.3
MELO3C015197.2 Cucumis melo HOM05D004378 ORTHO05D005269 7.6e-128 461.1 334 73.7
Glyma.18G071100 Glycine max HOM05D004378 ORTHO05D005269 7.6e-128 461.1 328 71.0
Psat5g163880 Pisum sativum HOM05D004378 ORTHO05D005269 7.6e-128 461.1 328 69.2
Sopen01g003990 Solanum pennellii HOM05D004378 ORTHO05D005269 7.6e-128 461.1 336 72.0
Phvul.006G062100 Phaseolus vulgaris HOM05D004378 ORTHO05D005269 1.7e-127 459.9 346 70.5
THA.LOC104799106 Tarenaya hassleriana HOM05D004378 ORTHO05D005269 2.9e-127 459.1 322 72.4
Aqoxy1G00284 Aquilegia oxysepala HOM05D004378 ORTHO05D005269 3.8e-127 458.8 333 69.7
MBI04_g36075_MAGBIO Magnolia biondii HOM05D004378 ORTHO05D005269 3.8e-127 458.8 329 70.5
Solyc01g008470.3 Solanum lycopersicum HOM05D004378 ORTHO05D005269 3.8e-127 458.8 336 71.4
CsaV3_1G042790 Cucumis sativus L. HOM05D004378 ORTHO05D005269 6.5e-127 458.0 332 73.2
EL10Ac4g10244 Beta vulgaris HOM05D004378 ORTHO05D005269 7.2e-126 454.5 332 69.3
Nitab4.5_0002741g0140 Nicotiana tabacum HOM05D004378 ORTHO05D005269 2.1e-125 453.0 323 72.4
HanXRQChr02g0051301 Helianthus annuus HOM05D004378 ORTHO05D005269 2.7e-125 452.6 290 76.6
Lj2A629T47 Lonicera japonica HOM05D004378 ORTHO05D005269 3.6e-125 452.2 332 72.3
PSO384G0525 Papaver somniferum HOM05D004378 ORTHO05D005269 6.1e-125 451.4 334 67.1
CDE05G0340 Ceratophyllum demersum HOM05D004378 ORTHO05D005269 1.3e-124 450.3 333 69.4
AUR62000126 Chenopodium quinoa HOM05D004378 ORTHO05D005269 3.9e-124 448.7 332 69.9
Lsat_1_v5_gn_2_31060 Lactuca sativa HOM05D004378 ORTHO05D005269 5.1e-124 448.4 299 74.2
Sabra09G0038500 Salix brachista HOM05D004378 ORTHO05D005269 1.5e-123 446.8 376 64.1
CDE05G0884 Ceratophyllum demersum HOM05D004378 ORTHO05D005269 3.3e-123 445.7 312 71.8
PGR119G1351 Punica granatum HOM05D004378 ORTHO05D005269 4.3e-123 445.3 327 72.8
PSO339G6315 Papaver somniferum HOM05D004378 ORTHO05D005269 5.7e-123 444.9 331 67.1
ATR0332G071 Amborella trichopoda HOM05D004378 ORTHO05D005269 3.7e-122 442.2 333 67.9
Ah.06g194140 Amaranthus hybridus HOM05D004378 ORTHO05D005269 4.8e-122 441.8 333 70.3
THA.LOC104816878 Tarenaya hassleriana HOM05D004378 ORTHO05D005269 1.8e-121 439.9 331 71.0
Aa31LG10G3540 Aethionema arabicum HOM05D004378 ORTHO05D005269 4.1e-121 438.7 278 79.1
CARHR096800 Cardamine hirsuta HOM05D004378 ORTHO05D005269 1.2e-120 437.2 309 72.5
Lsat_1_v5_gn_6_26200 Lactuca sativa HOM05D004378 ORTHO05D005269 4.5e-120 435.3 319 70.5
Dinv36255 Davidia involucrata HOM05D004378 ORTHO05D005269 1.7e-119 433.3 252 83.3
Hund22027 Selenicereus undatus HOM05D004378 ORTHO05D005269 7.2e-118 427.9 326 66.3
THA.LOC104824616 Tarenaya hassleriana HOM05D004378 ORTHO05D005269 1.8e-116 423.3 321 70.1
Manes.14G003200 Manihot esculenta HOM05D004378 ORTHO05D005269 3.9e-116 422.2 288 74.7
C05p43130 Brassica napus HOM05D004378 ORTHO05D005269 1.5e-115 420.2 339 67.0
BolC5t33043H Brassica oleracea HOM05D004378 ORTHO05D005269 1.5e-115 420.2 339 67.0
Os02g0435000 Oryza sativa ssp. japonica HOM05D004378 ORTHO05D005269 9.7e-115 417.5 332 62.7
Zm00001eb064100 Zea mays HOM05D004378 ORTHO05D005269 1.3e-114 417.2 333 61.0
BcaB04g20618 Brassica carinata HOM05D004378 ORTHO05D005269 1.7e-114 416.8 330 65.8
Carub.0003s2090 Capsella rubella HOM05D004378 ORTHO05D005269 1.7e-114 416.8 311 68.2
AT3G20920 Arabidopsis thaliana HOM05D004378 ORTHO05D005269 8.2e-114 414.5 302 70.2
A05p27790 Brassica napus HOM05D004378 ORTHO05D005269 1.1e-113 414.1 330 66.4
BraA05t21666Z Brassica rapa HOM05D004378 ORTHO05D005269 1.1e-113 414.1 330 66.1
BcaB06g26169 Brassica carinata HOM05D004378 ORTHO05D005269 1.4e-113 413.7 330 65.8
A01p33870 Brassica napus HOM05D004378 ORTHO05D005269 1.4e-113 413.7 311 66.9
Aa31LG8G7740 Aethionema arabicum HOM05D004378 ORTHO05D005269 5.3e-113 411.8 321 66.7
BraA01t03495Z Brassica rapa HOM05D004378 ORTHO05D005269 4.5e-112 408.7 311 66.2
Thhalv10021027m.g Eutrema salsugineum HOM05D004378 ORTHO05D005269 4.5e-112 408.7 306 68.0
Zm00001eb210940 Zea mays HOM05D004378 ORTHO05D005269 4.5e-112 408.7 330 59.1
Sp3g18950 Schrenkiella parvula HOM05D004378 ORTHO05D005269 1.0e-111 407.5 330 65.2
BolC3t17425H Brassica oleracea HOM05D004378 ORTHO05D005269 5.0e-111 405.2 317 65.3
BcaC01g03532 Brassica carinata HOM05D004378 ORTHO05D005269 8.5e-111 404.4 311 65.9
C03p51390 Brassica napus HOM05D004378 ORTHO05D005269 8.5e-111 404.4 311 65.9
A03p41980 Brassica napus HOM05D004378 ORTHO05D005269 2.5e-110 402.9 311 65.3
BraA03t13351Z Brassica rapa HOM05D004378 ORTHO05D005269 9.4e-110 401.0 327 64.2
BcaB06g26167 Brassica carinata HOM05D004378 ORTHO05D005269 7.9e-109 397.9 310 67.7
vmacro04153 Vaccinium macrocarpon HOM05D004378 ORTHO05D005269 1.4e-108 397.1 470 51.1
Actinidia06345 Actinidia chinensis HOM05D004378 ORTHO05D005269 4.4e-107 392.1 258 74.4
Sed0000917 Sechium edule HOM05D004378 ORTHO05D005269 1.2e-104 384.0 356 60.7
HPP92_024875 Vanilla planifolia HOM05D004378 ORTHO05D005269 2.6e-104 382.9 318 58.8
SEGI_31334 Sequoiadendron giganteum HOM05D004378 ORTHO05D005269 3.8e-103 379.0 336 58.6
AL3G34880 Arabidopsis lyrata HOM05D004378 ORTHO05D005269 2.6e-99 366.3 273 69.2
BcaC05g28205 Brassica carinata HOM05D004378 ORTHO05D005269 2.4e-97 359.8 329 59.6
SHI29790 Sapria himalayana HOM05D004378 ORTHO05D005269 1.0e-95 354.4 331 61.3
Lj1A330G22 Lonicera japonica HOM05D004378 ORTHO05D005269 1.2e-91 340.9 289 64.0
BolC1t04284H Brassica oleracea HOM05D004378 ORTHO05D005269 2.8e-90 336.3 258 67.4
SMO117G0234 Selaginella moellendorffii HOM05D004378 ORTHO05D005269 3.1e-89 332.8 323 53.6
Mapoly0080s0045 Marchantia polymorpha HOM05D004378 ORTHO05D005269 1.3e-87 327.4 348 50.3
AagrBONN_evm.TU.Sc2ySwM_228.3794 Anthoceros agrestis HOM05D004378 ORTHO05D005269 3.2e-86 322.8 316 55.7
Cpa.g.sc84.48 Carica papaya HOM05D004378 ORTHO05D005269 5.5e-86 322.0 217 74.2
Pp3c16_12820 Physcomitrium patens HOM05D004378 ORTHO05D005269 2.8e-82 309.7 270 56.7
CAN.G494.6 Capsicum annuum HOM05D004378 ORTHO05D005269 4.9e-82 308.9 225 72.0
Pp3c27_5530 Physcomitrium patens HOM05D004378 ORTHO05D005269 8.3e-82 308.1 340 50.3
MSTRG.21374 Avicennia marina HOM05D004378 ORTHO05D005269 1.4e-81 307.4 202 77.7
MD03G1174500 Malus domestica HOM05D004378 ORTHO05D005269 1.4e-76 290.8 222 70.7
FAN21G1987 Fragaria x ananassa HOM05D004378 ORTHO05D005269 5.2e-76 288.9 221 66.5
Lalb_Chr20g0115221 Lupinus albus HOM05D004378 ORTHO05D005269 9.8e-75 284.6 213 70.0
Sc09g0000750 Simmondsia chinensis HOM05D004378 ORTHO05D005269 6.4e-74 282.0 175 77.7
Peaxi162Scf00004g02528 Petunia axillaris HOM05D004378 ORTHO05D005269 5.6e-70 268.9 268 56.7
CBR_g54322 Chara braunii HOM05D004378 ORTHO05D005269 6.4e-66 255.4 297 46.5
TAR623G1006 Trochodendron aralioides HOM05D004378 ORTHO05D005269 1.8e-52 210.7 177 62.7
MSTRG.21373 Avicennia marina HOM05D004378 ORTHO05D005269 7.3e-46 188.7 105 84.8
TAR057G0002 Trochodendron aralioides HOM05D004378 ORTHO05D005269 2.1e-45 187.2 105 82.9
Lalb_Chr20g0115231 Lupinus albus HOM05D004378 ORTHO05D005269 9.9e-43 178.3 107 76.6
AUR62019307 Chenopodium quinoa HOM05D004378 ORTHO05D005269 9.3e-41 171.8 160 58.8
Sopen01g004010 Solanum pennellii HOM05D004378 ORTHO05D005269 1.1e-33 148.3 108 74.1
SHI32640 Sapria himalayana HOM05D004378 ORTHO05D000001 5.4e-33 146.0 89 75.3
Solyc03g096225.1 Solanum lycopersicum HOM05D004378 ORTHO05D005269 2.7e-24 117.1 92 59.8
Cre02.g084050 Chlamydomonas reinhardtii HOM05D004378 ORTHO05D005269 1.5e-22 111.3 268 26.9
MCO14G148 Micromonas commoda HOM05D004378 ORTHO05D005269 2.4e-20 104.0 234 31.2


User provided reference genes

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