Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu016678.1 Olea europaea HOM05D001846 ORTHO05D005785 1.6e-236 822.4 433 100.0
SGA_v2.0_scaffold8G04581 Striga asiatica HOM05D001846 ORTHO05D005785 7.4e-80 302.0 490 43.1
Dinv36247 Davidia involucrata HOM05D001846 ORTHO05D005785 4.4e-72 276.2 401 46.6
Hma1.2p1_1313F.1_g274970 Hydrangea macrophylla HOM05D001846 ORTHO05D005785 4.8e-71 272.7 370 48.1
ECA233G5307 Erigeron canadensis HOM05D001846 ORTHO05D005785 2.0e-69 267.3 457 42.2
Dinv22169 Davidia involucrata HOM05D001846 ORTHO05D005785 1.0e-68 265.0 374 47.1
HanXRQChr13g0401091 Helianthus annuus HOM05D001846 ORTHO05D005785 2.2e-68 263.8 446 42.2
TAR369G0438 Trochodendron aralioides HOM05D001846 ORTHO05D005785 3.2e-67 260.0 467 39.8
Sopen11g025350 Solanum pennellii HOM05D001846 ORTHO05D005785 5.5e-67 259.2 457 40.3
Solyc11g065630.3 Solanum lycopersicum HOM05D001846 ORTHO05D005785 7.2e-67 258.8 450 41.1
MSTRG.17597 Avicennia marina HOM05D001846 ORTHO05D005785 1.8e-65 254.2 456 42.3
CAN.G71.16 Capsicum annuum HOM05D001846 ORTHO05D005785 3.0e-65 253.4 370 44.9
Migut.D00610 Erythranthe guttata HOM05D001846 ORTHO05D005785 4.0e-65 253.1 341 49.3
QL01p004435 Quercus lobata HOM05D001846 ORTHO05D005785 2.0e-64 250.8 455 39.6
Lsat_1_v5_gn_6_25301 Lactuca sativa HOM05D001846 ORTHO05D005785 2.6e-64 250.4 438 40.4
Cpa.g.sc84.42 Carica papaya HOM05D001846 ORTHO05D005785 3.4e-64 250.0 422 40.5
QL01p004534 Quercus lobata HOM05D001846 ORTHO05D005785 3.7e-63 246.5 455 38.9
MSTRG.12465 Avicennia marina HOM05D001846 ORTHO05D005785 6.3e-63 245.7 459 41.4
Lj3g0017471 Lotus japonicus HOM05D001846 ORTHO05D005785 6.3e-63 245.7 457 40.0
Lj1A326G19 Lonicera japonica HOM05D001846 ORTHO05D005785 1.1e-62 245.0 403 41.9
Actinidia16341 Actinidia chinensis HOM05D001846 ORTHO05D005785 1.2e-61 241.5 430 40.5
Actinidia06915 Actinidia chinensis HOM05D001846 ORTHO05D005785 1.0e-60 238.4 396 43.2
Glyma.11G093300 Glycine max HOM05D001846 ORTHO05D005785 1.0e-60 238.4 358 43.9
Oeu026419.1 Olea europaea HOM05D001846 ORTHO05D005785 3.8e-60 236.5 483 39.5
Nitab4.5_0002741g0070 Nicotiana tabacum HOM05D001846 ORTHO05D005785 1.9e-59 234.2 460 40.0
VMungo1127G1936 Vigna mungo HOM05D001846 ORTHO05D005785 1.6e-58 231.1 456 38.2
Sc16g0011440 Simmondsia chinensis HOM05D001846 ORTHO05D005785 2.1e-58 230.7 355 44.2
Phvul.011G021900 Phaseolus vulgaris HOM05D001846 ORTHO05D005785 1.4e-57 228.0 456 37.5
Glyma.12G019500 Glycine max HOM05D001846 ORTHO05D005785 2.3e-57 227.3 354 43.8
TAR369G0720 Trochodendron aralioides HOM05D001846 ORTHO05D005785 6.8e-57 225.7 467 37.0
Ciclev10014939m.g Citrus clementina HOM05D001846 ORTHO05D005785 1.2e-56 224.9 464 37.3
Ah.06g194060 Amaranthus hybridus HOM05D001846 ORTHO05D005785 1.5e-56 224.6 399 41.4
Cc01_g04530 Coffea canephora HOM05D001846 ORTHO05D005785 1.5e-56 224.6 367 43.3
SalBow1G1572 Salvia bowleyana HOM05D001846 ORTHO05D005785 2.6e-56 223.8 407 41.8
AUR62019315 Chenopodium quinoa HOM05D001846 ORTHO05D005785 4.4e-56 223.0 379 40.9
Atru.chr3.2697 Acer truncatum HOM05D001846 ORTHO05D005785 5.7e-56 222.6 455 37.1
Lj3g0008415 Lotus japonicus HOM05D001846 ORTHO05D005785 1.7e-55 221.1 324 45.1
Lj3g0026618 Lotus japonicus HOM05D001846 ORTHO05D005785 1.7e-55 221.1 324 45.1
HanXRQChr02g0051491 Helianthus annuus HOM05D001846 ORTHO05D005785 4.9e-55 219.5 426 37.3
Sabra09G0038200 Salix brachista HOM05D001846 ORTHO05D005785 6.3e-55 219.2 461 36.9
CiPaw.13G159200 Carya illinoinensis HOM05D001846 ORTHO05D005785 2.4e-54 217.2 451 37.3
CANSAT54G0460 Cannabis sativa HOM05D001846 ORTHO05D005785 9.2e-54 215.3 423 38.1
AUR62000135 Chenopodium quinoa HOM05D001846 ORTHO05D005785 1.2e-53 214.9 379 41.2
GSVIVG01025241001 Vitis vinifera HOM05D001846 ORTHO05D005785 1.0e-52 211.8 460 35.2
Cfa009785 Carpinus fangiana HOM05D001846 ORTHO05D005785 1.3e-52 211.5 387 40.6
CiPaw.14G118000 Carya illinoinensis HOM05D001846 ORTHO05D005785 1.3e-52 211.5 387 40.3
PSO700G0220 Papaver somniferum HOM05D001846 ORTHO05D005785 8.6e-52 208.8 449 35.9
Manes.06G163200 Manihot esculenta HOM05D001846 ORTHO05D005785 3.3e-51 206.8 303 43.9
TWI60G1588 Tripterygium wilfordii HOM05D001846 ORTHO05D005785 3.3e-51 206.8 470 36.2
Nn7g36246 Nelumbo nucifera HOM05D001846 ORTHO05D005785 5.6e-51 206.1 332 41.3
Manes.14G003700 Manihot esculenta HOM05D001846 ORTHO05D005785 1.2e-50 204.9 462 34.2
Thecc.09G235700 Theobroma cacao HOM05D001846 ORTHO05D005785 2.8e-50 203.8 455 35.8
Potri.001G256700 Populus trichocarpa HOM05D001846 ORTHO05D005785 6.2e-50 202.6 433 37.2
Thecc.09G236100 Theobroma cacao HOM05D001846 ORTHO05D005785 1.0e-49 201.8 451 35.9
MSTRG.21370 Avicennia marina HOM05D001846 ORTHO05D005785 1.4e-49 201.4 244 52.0
MD11G1191400 Malus domestica HOM05D001846 ORTHO05D005785 1.4e-49 201.4 466 35.4
Duzib150G0388 Durio zibethinus HOM05D001846 ORTHO05D005785 1.8e-49 201.1 455 36.0
Potri.009G052400 Populus trichocarpa HOM05D001846 ORTHO05D005785 3.1e-49 200.3 431 36.9
EL10Ac4g10235 Beta vulgaris HOM05D001846 ORTHO05D005785 4.0e-49 199.9 334 39.5
PSO170G6025 Papaver somniferum HOM05D001846 ORTHO05D005785 6.8e-49 199.1 462 34.8
Hund22024 Selenicereus undatus HOM05D001846 ORTHO05D005785 1.2e-48 198.4 419 35.1
Haze_23151 Corylus avellana HOM05D001846 ORTHO05D005785 2.0e-48 197.6 485 34.2
Eucgr.J00759 Eucalyptus grandis HOM05D001846 ORTHO05D005785 2.0e-48 197.6 486 33.7
Gohir.D13G220500 Gossypium hirsutum HOM05D001846 ORTHO05D005785 7.5e-48 195.7 347 40.1
DCAR_023761 Daucus carota HOM05D001846 ORTHO05D005785 2.2e-47 194.1 478 33.3
FAN21G3148 Fragaria x ananassa HOM05D001846 ORTHO05D005785 3.7e-47 193.4 365 39.5
Sabra16G0155900 Salix brachista HOM05D001846 ORTHO05D005785 4.9e-47 193.0 434 35.5
Ca_18965_v3 Cicer arietinum L. HOM05D001846 ORTHO05D005785 1.4e-46 191.4 492 33.7
Aqoxy2G00165 Aquilegia oxysepala HOM05D001846 ORTHO05D005785 7.0e-46 189.1 460 33.3
FAN16G0902 Fragaria x ananassa HOM05D001846 ORTHO05D005785 1.2e-45 188.3 384 38.0
Gohir.D09G110300 Gossypium hirsutum HOM05D001846 ORTHO05D005785 2.0e-45 187.6 348 39.1
Medtr4g077160 Medicago truncatula HOM05D001846 ORTHO05D005785 7.8e-45 185.7 451 35.5
Lalb_Chr19g0139851 Lupinus albus HOM05D001846 ORTHO05D005785 1.0e-44 185.3 468 34.4
PGR119G1478 Punica granatum HOM05D001846 ORTHO05D005785 1.0e-44 185.3 372 37.9
FvH4_3g28690 Fragaria vesca HOM05D001846 ORTHO05D005785 1.3e-44 184.9 313 41.5
Psat7g170880 Pisum sativum HOM05D001846 ORTHO05D005785 1.3e-44 184.9 453 34.4
CsaV3_6G039320 Cucumis sativus L. HOM05D001846 ORTHO05D005785 3.9e-44 183.3 265 45.3
Peaxi162Scf00004g02629 Petunia axillaris HOM05D001846 ORTHO05D005785 1.9e-43 181.0 416 35.8
RcHm_v2.0_Chr5g0052391 Rosa chinensis HOM05D001846 ORTHO05D005785 9.5e-43 178.7 349 39.8
Gorai.006G127900 Gossypium raimondii HOM05D001846 ORTHO05D005785 6.2e-42 176.0 401 36.2
Gorai.013G251400 Gossypium raimondii HOM05D001846 ORTHO05D005785 6.2e-42 176.0 359 36.8
MELO3C014586.2 Cucumis melo HOM05D001846 ORTHO05D005785 8.1e-42 175.6 258 45.7
Sed0016770 Sechium edule HOM05D001846 ORTHO05D005785 1.1e-41 175.3 285 41.1
ClCG02G023130 Citrullus lanatus HOM05D001846 ORTHO05D005785 1.4e-41 174.9 273 42.9
Duzib168G1640 Durio zibethinus HOM05D001846 ORTHO05D005785 1.4e-41 174.9 500 32.2
Prupe.4G251400 Prunus persica HOM05D001846 ORTHO05D005785 3.1e-41 173.7 369 38.2
Nitab4.5_0007154g0020 Nicotiana tabacum HOM05D001846 ORTHO05D005785 2.6e-40 170.6 400 36.2
MD03G1173500 Malus domestica HOM05D001846 ORTHO05D005785 5.8e-40 169.5 394 36.8
FAN11G2083 Fragaria x ananassa HOM05D001846 ORTHO05D005785 7.5e-40 169.1 341 37.8
THA.LOC104817913 Tarenaya hassleriana HOM05D001846 ORTHO05D005785 7.5e-40 169.1 318 39.0
CDE05G0547 Ceratophyllum demersum HOM05D001846 ORTHO05D005785 6.4e-39 166.0 417 32.4
FAN25G3740 Fragaria x ananassa HOM05D001846 ORTHO05D005785 2.4e-38 164.1 369 37.1
arahy.Tifrunner.gnm1.ann1.8PYD8T Arachis hypogaea HOM05D001846 ORTHO05D005785 5.4e-38 162.9 339 38.1
Carub.0001s4028 Capsella rubella HOM05D001846 ORTHO05D005785 1.6e-37 161.4 262 41.2
AT1G51405 Arabidopsis thaliana HOM05D001846 ORTHO05D005785 2.7e-37 160.6 318 38.1
MBI04_g43760_MAGBIO Magnolia biondii HOM05D001846 ORTHO05D005785 7.8e-37 159.1 363 34.4
THA.LOC104811173 Tarenaya hassleriana HOM05D001846 ORTHO05D005785 5.1e-36 156.4 393 32.6
vmacro04149 Vaccinium macrocarpon HOM05D001846 ORTHO05D005785 6.6e-36 156.0 305 36.4
FAN25G3801 Fragaria x ananassa HOM05D001846 ORTHO05D005785 1.5e-35 154.8 320 37.5
arahy.Tifrunner.gnm1.ann1.563I02 Arachis hypogaea HOM05D001846 ORTHO05D005785 7.3e-35 152.5 340 37.1
COL.COLO4_06126 Corchorus olitorius HOM05D001846 ORTHO05D005785 2.1e-34 151.0 417 31.7
Rhsim13G0220400 Rhododendron simsii HOM05D001846 ORTHO05D005785 8.1e-34 149.1 416 33.2
BraA06t23456Z Brassica rapa HOM05D001846 ORTHO05D005785 5.2e-33 146.4 299 35.5
PGSC0003DMG400010305 Solanum tuberosum HOM05D001846 ORTHO05D005785 2.2e-31 141.0 212 44.8
BcaB07g33587 Brassica carinata HOM05D001846 ORTHO05D005785 1.1e-30 138.7 314 33.8
Thhalv10011423m.g Eutrema salsugineum HOM05D001846 ORTHO05D005785 2.7e-29 134.0 282 34.4
SEGI_01920 Sequoiadendron giganteum HOM05D001846 ORTHO05D005785 1.5e-27 128.3 460 28.0
Aa31LG10G3580 Aethionema arabicum HOM05D000089 ORTHO05D005785 1.9e-27 127.9 263 36.1
Zm00001eb400050 Zea mays HOM05D001846 ORTHO05D005785 1.9e-27 127.9 375 30.7
BcaC01g01249 Brassica carinata HOM05D001846 ORTHO05D005785 3.3e-27 127.1 290 33.4
C03p89760 Brassica napus HOM05D001846 ORTHO05D005785 3.3e-27 127.1 290 33.4
Sp1g38080 Schrenkiella parvula HOM05D001846 ORTHO05D005785 2.8e-26 124.0 294 32.0
BolC3t21298H Brassica oleracea HOM05D001846 ORTHO05D005785 4.7e-26 123.2 295 31.9
BcaC08g43310 Brassica carinata HOM05D001846 ORTHO05D005785 8.1e-26 122.5 251 35.1
C06p06570 Brassica napus HOM05D001846 ORTHO05D005785 1.8e-25 121.3 251 35.1
BolC6t35770H Brassica oleracea HOM05D001846 ORTHO05D005785 1.8e-25 121.3 251 35.1
MSTRG.18433 Avicennia marina HOM05D001846 ORTHO05D005785 3.1e-25 120.6 198 42.9
SGA_v2.0_scaffold247G44890 Striga asiatica HOM05D001846 ORTHO05D005785 6.8e-25 119.4 247 37.2
FAN25G3220 Fragaria x ananassa HOM05D001846 ORTHO05D005785 1.5e-24 118.2 205 41.0
AL1G59260 Arabidopsis lyrata HOM05D001846 ORTHO05D005785 2.0e-24 117.9 281 33.8
ATR0332G095 Amborella trichopoda HOM05D001846 ORTHO05D005785 3.4e-24 117.1 358 27.7
Zm00001eb008800 Zea mays HOM05D001846 ORTHO05D005785 5.8e-24 116.3 340 31.5
BraA08t32338Z Brassica rapa HOM05D001846 ORTHO05D005785 2.2e-23 114.4 250 34.4
A06p02500 Brassica napus HOM05D001846 ORTHO05D005785 9.3e-22 109.0 386 27.7
Gohir.A09G113600 Gossypium hirsutum HOM05D001846 ORTHO05D005785 9.3e-22 109.0 191 39.8
MSTRG.18434 Avicennia marina HOM05D001846 ORTHO05D005785 1.6e-21 108.2 215 39.5
CARHR041560 Cardamine hirsuta HOM05D001846 ORTHO05D005785 2.1e-21 107.8 347 29.4
MBI04_g45701_MAGBIO Magnolia biondii HOM05D001846 ORTHO05D005785 2.7e-21 107.5 187 40.1
HPP92_007908 Vanilla planifolia HOM05D001846 ORTHO05D005785 1.1e-19 102.1 329 28.6
A08p03060 Brassica napus HOM05D001846 ORTHO05D005785 1.9e-19 101.3 248 33.1
BcaB04g17234 Brassica carinata HOM05D001846 ORTHO05D005785 1.3e-18 98.6 240 32.1
Actinidia26798 Actinidia chinensis HOM05D001846 ORTHO05D005785 1.6e-18 98.2 79 62.0
CDE05G3609 Ceratophyllum demersum HOM05D001846 ORTHO05D005785 4.8e-18 96.7 229 36.2
CDE05G1816 Ceratophyllum demersum HOM05D001846 ORTHO05D005785 8.1e-18 95.9 107 46.7
Gohir.A09G113700 Gossypium hirsutum HOM05D001846 ORTHO05D005785 7.6e-16 89.4 81 56.8
Nn6g35051 Nelumbo nucifera HOM05D001846 ORTHO05D005785 2.4e-14 84.3 124 41.9
Os03g0216900 Oryza sativa ssp. japonica HOM05D001846 ORTHO05D005785 3.9e-12 77.0 115 40.0
Nn2g13769 Nelumbo nucifera HOM05D001846 ORTHO05D005785 6.9e-09 66.2 157 32.5
SEGI_28173 Sequoiadendron giganteum HOM05D001846 ORTHO05D005785 2.2e-07 61.2 86 37.2
Pp3c6_6740 Physcomitrium patens HOM05D019331 ORTHO05D026050 1.1e-06 58.9 334 24.3
Mapoly0001s0089 Marchantia polymorpha HOM05D001846 ORTHO05D005785 3.2e-06 57.4 95 32.6
ATR0118G002 Amborella trichopoda HOM05D001846 ORTHO05D067839 9.3e-06 55.8 186 23.1


User provided reference genes

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