Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu016658.1 Olea europaea HOM05D006925 ORTHO05D008830 2.1e-55 218.8 110 100.0
Dinv30983 Davidia involucrata HOM05D006925 ORTHO05D008830 3.1e-30 135.2 111 65.8
Cc02_g23820 Coffea canephora HOM05D006925 ORTHO05D008830 6.8e-30 134.0 92 75.0
MSTRG.16455 Avicennia marina HOM05D006925 ORTHO05D008830 2.6e-29 132.1 109 66.1
Hma1.2p1_0157F.1_g069250 Hydrangea macrophylla HOM05D006925 ORTHO05D008830 7.5e-29 130.6 106 65.1
Migut.B00701 Erythranthe guttata HOM05D006925 ORTHO05D008830 1.1e-27 126.7 109 64.2
Nitab4.5_0000288g0050 Nicotiana tabacum HOM05D006925 ORTHO05D008830 7.1e-27 124.0 90 68.9
Nitab4.5_0002274g0030 Nicotiana tabacum HOM05D006925 ORTHO05D008830 7.1e-27 124.0 90 68.9
CSS0028149 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 1.2e-26 123.2 97 61.9
TWI14G0460 Tripterygium wilfordii HOM05D006925 ORTHO05D008830 1.2e-26 123.2 90 66.7
unitig_8.g4519 Utricularia gibba HOM05D006925 ORTHO05D008830 1.2e-26 123.2 86 72.1
SGA_v2.0_scaffold254G45226 Striga asiatica HOM05D006925 ORTHO05D008830 1.6e-26 122.9 86 74.4
CAN.G402.4 Capsicum annuum HOM05D006925 ORTHO05D008830 2.7e-26 122.1 90 66.7
CSS0004280 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 1.0e-25 120.2 116 56.0
Manes.06G015100 Manihot esculenta HOM05D006925 ORTHO05D008830 1.3e-25 119.8 80 70.0
Sabra03G0019700 Salix brachista HOM05D006925 ORTHO05D000812 2.3e-25 119.0 92 66.3
Sabra03G0019900 Salix brachista HOM05D006925 ORTHO05D008830 2.3e-25 119.0 92 66.3
Sc03g0005610 Simmondsia chinensis HOM05D006925 ORTHO05D008830 3.0e-25 118.6 82 65.9
MBI06_g17054_MAGBIO Magnolia biondii HOM05D006925 ORTHO05D008830 5.1e-25 117.9 87 66.7
PGSC0003DMG400003436 Solanum tuberosum HOM05D006925 ORTHO05D008830 5.1e-25 117.9 110 56.4
Lsat_1_v5_gn_7_69720 Lactuca sativa HOM05D006925 ORTHO05D008830 8.6e-25 117.1 107 60.7
Ah.02g128580 Amaranthus hybridus HOM05D006925 ORTHO05D008830 1.1e-24 116.7 86 68.6
Solyc10g044840.2 Solanum lycopersicum HOM05D006925 ORTHO05D008830 1.1e-24 116.7 88 64.8
THA.LOC104824095 Tarenaya hassleriana HOM05D006925 ORTHO05D008830 1.1e-24 116.7 66 83.3
HanXRQChr03g0071141 Helianthus annuus HOM05D006925 ORTHO05D008830 1.9e-24 115.9 104 63.5
Potri.003G046600 Populus trichocarpa HOM05D006925 ORTHO05D008830 1.9e-24 115.9 91 65.9
DCAR_004828 Daucus carota HOM05D006925 ORTHO05D008830 4.3e-24 114.8 111 58.6
Sopen10g013620 Solanum pennellii HOM05D006925 ORTHO05D008830 4.3e-24 114.8 88 63.6
Ciclev10003645m.g Citrus clementina HOM05D006925 ORTHO05D008830 9.5e-24 113.6 65 83.1
CANSAT01G0563 Cannabis sativa HOM05D006925 ORTHO05D008830 8.1e-23 110.5 78 67.9
Cfa004416 Carpinus fangiana HOM05D006925 ORTHO05D008830 8.1e-23 110.5 78 66.7
Peaxi162Scf00055g00018 Petunia axillaris HOM05D006925 ORTHO05D008830 8.1e-23 110.5 65 76.9
GSVIVG01023121001 Vitis vinifera HOM05D006925 ORTHO05D008830 8.1e-23 110.5 83 66.3
QL02p103778 Quercus lobata HOM05D006925 ORTHO05D008830 1.1e-22 110.2 78 67.9
ATR1089G139 Amborella trichopoda HOM05D006925 ORTHO05D008830 1.4e-22 109.8 78 69.2
Gohir.D10G082800 Gossypium hirsutum HOM05D006925 ORTHO05D008830 1.8e-22 109.4 100 55.0
Gohir.A10G068400 Gossypium hirsutum HOM05D006925 ORTHO05D008830 5.2e-22 107.8 85 61.2
Gorai.011G089700 Gossypium raimondii HOM05D006925 ORTHO05D008830 5.2e-22 107.8 85 61.2
CiPaw.05G000400 Carya illinoinensis HOM05D006925 ORTHO05D008830 6.8e-22 107.5 79 63.3
PGR042G2053 Punica granatum HOM05D006925 ORTHO05D008830 6.8e-22 107.5 80 63.8
Thecc.06G062200 Theobroma cacao HOM05D006925 ORTHO05D008830 6.8e-22 107.5 96 56.2
TAR628G1169 Trochodendron aralioides HOM05D006925 ORTHO05D008830 6.8e-22 107.5 86 61.6
Haze_09956 Corylus avellana HOM05D006925 ORTHO05D008830 1.2e-21 106.7 74 67.6
Aqoxy5G01835 Aquilegia oxysepala HOM05D006925 ORTHO05D008830 3.4e-21 105.1 94 58.5
Hund15314 Selenicereus undatus HOM05D006925 ORTHO05D008830 3.4e-21 105.1 76 69.7
COL.COLO4_31098 Corchorus olitorius HOM05D006925 ORTHO05D008830 4.4e-21 104.8 79 64.6
arahy.Tifrunner.gnm1.ann1.EDE5FN Arachis hypogaea HOM05D006925 ORTHO05D008830 9.9e-21 103.6 85 62.4
CsaV3_3G006780 Cucumis sativus L. HOM05D006925 ORTHO05D008830 9.9e-21 103.6 58 82.8
Duzib160G0166 Durio zibethinus HOM05D006925 ORTHO05D008830 9.9e-21 103.6 98 54.1
ClCG10G007640 Citrullus lanatus HOM05D006925 ORTHO05D008830 1.3e-20 103.2 59 81.4
ECA248G0237 Erigeron canadensis HOM05D002199 ORTHO05D007829 1.3e-20 103.2 67 74.6
Prupe.1G587400 Prunus persica HOM05D006925 ORTHO05D008830 1.3e-20 103.2 64 75.0
arahy.Tifrunner.gnm1.ann1.MTF64G Arachis hypogaea HOM05D006925 ORTHO05D008830 2.2e-20 102.4 80 67.5
EL10Ac6g13952 Beta vulgaris HOM05D006925 ORTHO05D008830 3.8e-20 101.7 80 62.5
Glyma.07G271000 Glycine max HOM05D006925 ORTHO05D008830 3.8e-20 101.7 84 64.3
Sed0012673 Sechium edule HOM05D006925 ORTHO05D008830 3.8e-20 101.7 59 78.0
Actinidia00135 Actinidia chinensis HOM05D006925 ORTHO05D008830 4.9e-20 101.3 82 61.0
RcHm_v2.0_Chr7g0218321 Rosa chinensis HOM05D006925 ORTHO05D008830 4.9e-20 101.3 103 53.4
AUR62040119 Chenopodium quinoa HOM05D006925 ORTHO05D008830 8.4e-20 100.5 80 63.8
Sp2g13680 Schrenkiella parvula HOM05D006925 ORTHO05D008830 8.4e-20 100.5 76 64.5
AL5G11640 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 1.1e-19 100.1 77 66.2
AT2G02410 Arabidopsis thaliana HOM05D006925 ORTHO05D008830 1.1e-19 100.1 77 66.2
BcaC06g31233 Brassica carinata HOM05D006925 ORTHO05D008830 1.4e-19 99.8 81 63.0
Phvul.003G090400 Phaseolus vulgaris HOM05D006925 ORTHO05D008830 2.4e-19 99.0 80 66.2
Thhalv10004663m.g Eutrema salsugineum HOM05D006925 ORTHO05D008830 4.1e-19 98.2 81 58.0
VMungo1215G1006 Vigna mungo HOM05D006925 ORTHO05D008830 5.4e-19 97.8 80 63.8
AUR62032491 Chenopodium quinoa HOM05D006925 ORTHO05D008830 7.1e-19 97.4 65 69.2
CARHR144990 Cardamine hirsuta HOM05D006925 ORTHO05D008830 9.2e-19 97.1 81 58.0
A06p43640 Brassica napus HOM05D006925 ORTHO05D008830 1.6e-18 96.3 80 62.5
BraA06t27246Z Brassica rapa HOM05D006925 ORTHO05D008830 1.6e-18 96.3 80 62.5
BcaC06g34054 Brassica carinata HOM05D006925 ORTHO05D008830 3.5e-18 95.1 84 58.3
C07p33220 Brassica napus HOM05D006925 ORTHO05D008830 3.5e-18 95.1 84 58.3
BolC7t43833H Brassica oleracea HOM05D006925 ORTHO05D008830 3.5e-18 95.1 84 58.3
CDE05G0936 Ceratophyllum demersum HOM05D006925 ORTHO05D008830 7.8e-18 94.0 83 55.4
Rhsim11G0114700 Rhododendron simsii HOM05D006925 ORTHO05D008830 3.0e-17 92.0 80 58.8
Ca_13518_v3 Cicer arietinum L. HOM05D006925 ORTHO05D008830 3.9e-17 91.7 86 59.3
MD15G1445500 Malus domestica HOM05D006925 ORTHO05D008830 5.1e-17 91.3 96 50.0
Lj4g0023352 Lotus japonicus HOM05D006925 ORTHO05D008830 8.7e-17 90.5 80 61.2
PSO210G4845 Papaver somniferum HOM05D006925 ORTHO05D008830 1.5e-16 89.7 79 54.4
Lalb_Chr07g0176851 Lupinus albus HOM05D006925 ORTHO05D008830 2.5e-16 89.0 106 50.9
Lj5A307T31 Lonicera japonica HOM05D006925 ORTHO05D008830 9.6e-16 87.0 66 65.2
Medtr4g134410 Medicago truncatula HOM05D006925 ORTHO05D008830 9.6e-16 87.0 59 69.5
FvH4_5g27220 Fragaria vesca HOM05D006925 ORTHO05D008830 1.6e-15 86.3 58 67.2
FAN08G3037 Fragaria x ananassa HOM05D006925 ORTHO05D008830 1.6e-15 86.3 58 67.2
FAN13G1230 Fragaria x ananassa HOM05D006925 ORTHO05D008830 1.6e-15 86.3 58 67.2
FAN18G1352 Fragaria x ananassa HOM05D006925 ORTHO05D008830 1.6e-15 86.3 58 67.2
Eucgr.G00053 Eucalyptus grandis HOM05D006925 ORTHO05D008830 1.4e-14 83.2 65 63.1
vmacro01630 Vaccinium macrocarpon HOM05D006925 ORTHO05D008830 1.8e-14 82.8 84 54.8
Psat4g001760 Pisum sativum HOM05D006925 ORTHO05D008830 2.2e-12 75.9 49 71.4
Mapoly0001s0380 Marchantia polymorpha HOM05D006925 ORTHO05D008830 3.8e-12 75.1 101 46.5
Aa31LG2G7670 Aethionema arabicum HOM05D006925 ORTHO05D008830 4.9e-12 74.7 76 53.9
Nn5g27113 Nelumbo nucifera HOM05D006925 ORTHO05D008830 1.1e-11 73.6 42 76.2
HPP92_001204 Vanilla planifolia HOM05D006925 ORTHO05D008830 5.4e-11 71.2 59 61.0
Pp3c9_8480 Physcomitrium patens HOM05D006925 ORTHO05D008830 9.3e-11 70.5 68 52.9
Pp3c15_4340 Physcomitrium patens HOM05D006925 ORTHO05D008830 6.0e-10 67.8 80 43.8
MELO3C016443.2 Cucumis melo HOM05D006925 ORTHO05D008830 7.8e-10 67.4 42 71.4
TPR.G5931 Trifolium pratense HOM05D006925 ORTHO05D008830 9.6e-08 60.5 73 47.9
SMO358G0233 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 4.8e-07 58.2 63 46.0
SEGI_06138 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 6.2e-07 57.8 84 41.7
SEGI_30664 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 6.2e-07 57.8 84 41.7
AagrBONN_evm.TU.Sc2ySwM_369.585 Anthoceros agrestis HOM05D006925 ORTHO05D008830 4.0e-06 55.1 68 45.6


User provided reference genes

Program Settings