Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu016657.1 Olea europaea HOM05D006925 ORTHO05D008830 9.6e-37 156.4 82 100.0
MSTRG.16455 Avicennia marina HOM05D006925 ORTHO05D008830 4.2e-24 114.4 61 95.1
Migut.B00701 Erythranthe guttata HOM05D006925 ORTHO05D008830 2.7e-23 111.7 61 93.4
Cc02_g23820 Coffea canephora HOM05D006925 ORTHO05D008830 1.3e-22 109.4 60 93.3
Nitab4.5_0000288g0050 Nicotiana tabacum HOM05D006925 ORTHO05D008830 1.5e-21 105.9 60 88.3
Nitab4.5_0002274g0030 Nicotiana tabacum HOM05D006925 ORTHO05D008830 1.5e-21 105.9 60 88.3
Hma1.2p1_0157F.1_g069250 Hydrangea macrophylla HOM05D006925 ORTHO05D008830 5.6e-21 104.0 65 83.1
Sopen10g013620 Solanum pennellii HOM05D006925 ORTHO05D008830 1.6e-20 102.4 62 82.3
FvH4_5g27220 Fragaria vesca HOM05D006925 ORTHO05D008830 2.1e-20 102.1 59 86.4
FAN08G3037 Fragaria x ananassa HOM05D006925 ORTHO05D008830 2.1e-20 102.1 59 86.4
FAN18G1352 Fragaria x ananassa HOM05D006925 ORTHO05D008830 2.1e-20 102.1 59 86.4
RcHm_v2.0_Chr7g0218321 Rosa chinensis HOM05D006925 ORTHO05D008830 2.1e-20 102.1 59 86.4
Solyc10g044840.2 Solanum lycopersicum HOM05D006925 ORTHO05D008830 2.1e-20 102.1 62 82.3
PGSC0003DMG400003436 Solanum tuberosum HOM05D006925 ORTHO05D008830 2.1e-20 102.1 60 85.0
Aqoxy5G01835 Aquilegia oxysepala HOM05D006925 ORTHO05D008830 2.8e-20 101.7 60 85.0
unitig_8.g4519 Utricularia gibba HOM05D006925 ORTHO05D008830 2.8e-20 101.7 65 81.5
GSVIVG01023121001 Vitis vinifera HOM05D006925 ORTHO05D008830 2.8e-20 101.7 62 85.5
CSS0004280 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 6.2e-20 100.5 60 85.0
CSS0028149 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 6.2e-20 100.5 60 85.0
CiPaw.05G000400 Carya illinoinensis HOM05D006925 ORTHO05D008830 6.2e-20 100.5 60 85.0
PGR042G2053 Punica granatum HOM05D006925 ORTHO05D008830 6.2e-20 100.5 60 85.0
Gorai.011G089700 Gossypium raimondii HOM05D006925 ORTHO05D008830 8.1e-20 100.1 60 85.0
DCAR_004828 Daucus carota HOM05D006925 ORTHO05D008830 1.1e-19 99.8 62 82.3
ECA248G0237 Erigeron canadensis HOM05D002199 ORTHO05D007829 1.1e-19 99.8 59 84.7
HanXRQChr03g0071141 Helianthus annuus HOM05D006925 ORTHO05D008830 1.1e-19 99.8 59 86.4
QL02p103778 Quercus lobata HOM05D006925 ORTHO05D008830 1.1e-19 99.8 60 86.7
CAN.G402.4 Capsicum annuum HOM05D006925 ORTHO05D008830 1.4e-19 99.4 63 79.4
Glyma.07G271000 Glycine max HOM05D006925 ORTHO05D008830 1.4e-19 99.4 62 80.6
Prupe.1G587400 Prunus persica HOM05D006925 ORTHO05D008830 2.4e-19 98.6 59 84.7
Aa31LG2G7670 Aethionema arabicum HOM05D006925 ORTHO05D008830 3.1e-19 98.2 60 83.3
Medtr4g134410 Medicago truncatula HOM05D006925 ORTHO05D008830 3.1e-19 98.2 62 80.6
Glyma.17G002900 Glycine max HOM05D006925 ORTHO05D008830 4.0e-19 97.8 62 80.6
MD15G1445500 Malus domestica HOM05D006925 ORTHO05D008830 4.0e-19 97.8 59 83.1
BcaC06g31233 Brassica carinata HOM05D006925 ORTHO05D008830 5.3e-19 97.4 60 81.7
BcaC06g34054 Brassica carinata HOM05D006925 ORTHO05D008830 5.3e-19 97.4 60 81.7
A06p43640 Brassica napus HOM05D006925 ORTHO05D008830 5.3e-19 97.4 60 81.7
C07p33220 Brassica napus HOM05D006925 ORTHO05D008830 5.3e-19 97.4 60 81.7
BolC7t43833H Brassica oleracea HOM05D006925 ORTHO05D008830 5.3e-19 97.4 60 81.7
BraA06t27246Z Brassica rapa HOM05D006925 ORTHO05D008830 5.3e-19 97.4 60 81.7
Dinv30983 Davidia involucrata HOM05D006925 ORTHO05D008830 5.3e-19 97.4 60 83.3
Gohir.D10G082800 Gossypium hirsutum HOM05D006925 ORTHO05D008830 5.3e-19 97.4 60 83.3
AL5G11640 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 6.9e-19 97.1 60 80.0
AL5G11650 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 6.9e-19 97.1 60 80.0
arahy.Tifrunner.gnm1.ann1.EDE5FN Arachis hypogaea HOM05D006925 ORTHO05D008830 6.9e-19 97.1 62 80.6
arahy.Tifrunner.gnm1.ann1.MTF64G Arachis hypogaea HOM05D006925 ORTHO05D008830 6.9e-19 97.1 62 80.6
Carub.0005s0146 Capsella rubella HOM05D006925 ORTHO05D008830 6.9e-19 97.1 60 80.0
Lj4g0023352 Lotus japonicus HOM05D006925 ORTHO05D008830 6.9e-19 97.1 62 80.6
Sp2g13680 Schrenkiella parvula HOM05D006925 ORTHO05D008830 6.9e-19 97.1 60 80.0
CANSAT01G0563 Cannabis sativa HOM05D006925 ORTHO05D008830 9.0e-19 96.7 58 86.2
SGA_v2.0_scaffold254G45226 Striga asiatica HOM05D006925 ORTHO05D008830 9.0e-19 96.7 59 86.4
THA.LOC104824095 Tarenaya hassleriana HOM05D006925 ORTHO05D008830 1.2e-18 96.3 60 80.0
TWI14G0460 Tripterygium wilfordii HOM05D006925 ORTHO05D008830 1.2e-18 96.3 58 86.2
Haze_09956 Corylus avellana HOM05D006925 ORTHO05D008830 1.5e-18 95.9 60 86.7
VMungo1215G1006 Vigna mungo HOM05D006925 ORTHO05D008830 1.5e-18 95.9 62 77.4
Ah.02g128580 Amaranthus hybridus HOM05D006925 ORTHO05D008830 2.6e-18 95.1 60 78.3
ClCG10G007640 Citrullus lanatus HOM05D006925 ORTHO05D008830 5.8e-18 94.0 60 78.3
Duzib160G0166 Durio zibethinus HOM05D006925 ORTHO05D008830 5.8e-18 94.0 60 80.0
Lalb_Chr07g0176851 Lupinus albus HOM05D006925 ORTHO05D008830 5.8e-18 94.0 62 77.4
Cfa004416 Carpinus fangiana HOM05D006925 ORTHO05D008830 7.6e-18 93.6 59 86.4
MBI06_g17054_MAGBIO Magnolia biondii HOM05D006925 ORTHO05D008830 7.6e-18 93.6 60 78.3
COL.COLO4_31098 Corchorus olitorius HOM05D006925 ORTHO05D008830 1.0e-17 93.2 60 78.3
Sabra03G0019700 Salix brachista HOM05D006925 ORTHO05D000812 1.3e-17 92.8 60 78.3
CsaV3_3G006780 Cucumis sativus L. HOM05D006925 ORTHO05D008830 2.2e-17 92.0 60 76.7
Potri.003G046600 Populus trichocarpa HOM05D006925 ORTHO05D008830 2.9e-17 91.7 60 76.7
CDE05G0936 Ceratophyllum demersum HOM05D006925 ORTHO05D008830 3.8e-17 91.3 60 76.7
Nn5g27113 Nelumbo nucifera HOM05D006925 ORTHO05D008830 2.5e-16 88.6 60 78.3
PSO210G4845 Papaver somniferum HOM05D006925 ORTHO05D008830 4.2e-16 87.8 59 72.9
Actinidia00135 Actinidia chinensis HOM05D006925 ORTHO05D008830 5.5e-16 87.4 60 75.0
Peaxi162Scf00055g00018 Petunia axillaris HOM05D006925 ORTHO05D008830 2.1e-15 85.5 94 54.3
ATR1089G139 Amborella trichopoda HOM05D006925 ORTHO05D008830 5.1e-14 80.9 59 69.5
HPP92_001204 Vanilla planifolia HOM05D006925 ORTHO05D008830 5.1e-14 80.9 59 71.2
FAN13G1230 Fragaria x ananassa HOM05D006925 ORTHO05D008830 4.3e-13 77.8 46 87.0
Psat4g001760 Pisum sativum HOM05D006925 ORTHO05D008830 4.3e-13 77.8 60 63.3
EL10Ac6g13953 Beta vulgaris HOM05D006925 ORTHO05D008830 4.8e-12 74.3 48 77.1
Os03g0843200 Oryza sativa ssp. japonica HOM05D006925 ORTHO05D008830 6.2e-12 73.9 59 62.7
Lsat_1_v5_gn_7_69720 Lactuca sativa HOM05D006925 ORTHO05D008830 9.3e-08 60.1 77 45.5
SMO358G0233 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 2.7e-07 58.5 57 50.9
Mapoly0001s0380 Marchantia polymorpha HOM05D006925 ORTHO05D008830 4.6e-07 57.8 57 42.1
Pp3c9_8480 Physcomitrium patens HOM05D006925 ORTHO05D008830 4.6e-07 57.8 57 49.1
vmacro01629 Vaccinium macrocarpon HOM05D006925 ORTHO05D008830 7.9e-07 57.0 51 56.9
Lj5A307T31 Lonicera japonica HOM05D006925 ORTHO05D008830 3.9e-06 54.7 53 56.6
Ciclev10003790m.g Citrus clementina HOM05D006925 ORTHO05D008830 6.7e-06 53.9 32 81.2


User provided reference genes

Program Settings