Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu016610.1 Olea europaea HOM05D004197 ORTHO05D004975 3.8e-66 254.6 120 100.0
MSTRG.27564 Avicennia marina HOM05D004197 ORTHO05D004975 1.9e-57 225.7 120 85.8
PSO832G1844 Papaver somniferum HOM05D004197 ORTHO05D004975 2.7e-56 221.9 116 88.8
Cc02_g26370 Coffea canephora HOM05D004197 ORTHO05D004975 7.9e-56 220.3 120 84.2
Duzib212G0574 Durio zibethinus HOM05D004197 ORTHO05D004975 7.9e-56 220.3 120 85.0
Hma1.2p1_0307F.1_g119895 Hydrangea macrophylla HOM05D004197 ORTHO05D004975 7.9e-56 220.3 120 87.5
Lsat_1_v5_gn_6_33001 Lactuca sativa HOM05D004197 ORTHO05D004975 1.3e-55 219.5 120 85.8
SalBow6G6028 Salvia bowleyana HOM05D004197 ORTHO05D004975 1.3e-55 219.5 119 82.4
Thecc.04G166300 Theobroma cacao HOM05D004197 ORTHO05D004975 1.3e-55 219.5 120 85.0
Gohir.A10G143100 Gossypium hirsutum HOM05D004197 ORTHO05D004975 1.8e-55 219.2 120 85.0
Gorai.011G136700 Gossypium raimondii HOM05D004197 ORTHO05D004975 1.8e-55 219.2 120 85.0
Gorai.012G053000 Gossypium raimondii HOM05D004197 ORTHO05D004975 1.8e-55 219.2 120 85.0
Hund04335 Selenicereus undatus HOM05D004197 ORTHO05D004975 1.8e-55 219.2 120 83.3
MELO3C017759.2 Cucumis melo HOM05D004197 ORTHO05D004975 3.0e-55 218.4 120 80.0
Duzib151G0052 Durio zibethinus HOM05D004197 ORTHO05D004975 3.9e-55 218.0 120 84.2
Migut.F01587 Erythranthe guttata HOM05D004197 ORTHO05D004975 3.9e-55 218.0 120 82.5
Gohir.A05G367700 Gossypium hirsutum HOM05D004197 ORTHO05D004975 5.1e-55 217.6 120 84.2
Gohir.D10G123800 Gossypium hirsutum HOM05D004197 ORTHO05D004975 6.7e-55 217.2 120 84.2
Rhsim03G0176800 Rhododendron simsii HOM05D004197 ORTHO05D004975 6.7e-55 217.2 118 87.3
ECA240G1468 Erigeron canadensis HOM05D004197 ORTHO05D004975 8.7e-55 216.9 120 82.5
Gohir.D04G047600 Gossypium hirsutum HOM05D004197 ORTHO05D004975 8.7e-55 216.9 120 84.2
PSO017G5565 Papaver somniferum HOM05D004197 ORTHO05D004975 8.7e-55 216.9 116 86.2
PSO675G0737 Papaver somniferum HOM05D004197 ORTHO05D004975 8.7e-55 216.9 116 86.2
CSS0039414 Camellia sinensis var. sinensis HOM05D004197 ORTHO05D004975 1.5e-54 216.1 120 84.2
CSS0047181 Camellia sinensis var. sinensis HOM05D004197 ORTHO05D004975 1.5e-54 216.1 120 84.2
HanXRQChr10g0286001 Helianthus annuus HOM05D004197 ORTHO05D004975 1.5e-54 216.1 120 82.5
ECA247G1539 Erigeron canadensis HOM05D004197 ORTHO05D004975 3.3e-54 214.9 120 83.3
Peaxi162Scf00196g00222 Petunia axillaris HOM05D004197 ORTHO05D004975 3.3e-54 214.9 120 83.3
PSO591G0183 Papaver somniferum HOM05D004197 ORTHO05D004975 4.3e-54 214.5 116 85.3
Dinv33200 Davidia involucrata HOM05D004197 ORTHO05D004975 5.7e-54 214.2 117 87.2
Nn1g09691 Nelumbo nucifera HOM05D004197 ORTHO05D004975 5.7e-54 214.2 120 82.5
GSVIVG01038138001 Vitis vinifera HOM05D004197 ORTHO05D004975 5.7e-54 214.2 120 84.2
CAN.G525.23 Capsicum annuum HOM05D004197 ORTHO05D004975 7.4e-54 213.8 120 81.7
Ciclev10022904m.g Citrus clementina HOM05D004197 ORTHO05D004975 7.4e-54 213.8 120 82.5
Nitab4.5_0007872g0010 Nicotiana tabacum HOM05D004197 ORTHO05D004975 7.4e-54 213.8 120 80.8
TWI32G1250 Tripterygium wilfordii HOM05D004197 ORTHO05D004975 7.4e-54 213.8 120 84.2
CiPaw.11G096400 Carya illinoinensis HOM05D004197 ORTHO05D004975 9.7e-54 213.4 120 81.7
PGR142G4086 Punica granatum HOM05D004197 ORTHO05D004975 9.7e-54 213.4 120 83.3
EL10Ac6g15364 Beta vulgaris HOM05D004197 ORTHO05D004975 1.3e-53 213.0 120 82.5
Cpa.g.sc10.180 Carica papaya HOM05D004197 ORTHO05D004975 1.3e-53 213.0 120 83.3
Cc03_g14030 Coffea canephora HOM05D004197 ORTHO05D004975 1.3e-53 213.0 120 83.3
Phvul.003G238300 Phaseolus vulgaris HOM05D004197 ORTHO05D004975 1.3e-53 213.0 118 81.4
Lsat_1_v5_gn_5_190681 Lactuca sativa HOM05D004197 ORTHO05D004975 2.2e-53 212.2 120 82.5
Atru.chr12.1293 Acer truncatum HOM05D004197 ORTHO05D004975 2.8e-53 211.8 120 80.0
ClCG07G015230 Citrullus lanatus HOM05D004197 ORTHO05D004975 2.8e-53 211.8 120 80.0
VMungo0251G3068 Vigna mungo HOM05D004197 ORTHO05D004975 2.8e-53 211.8 118 81.4
Nitab4.5_0000902g0310 Nicotiana tabacum HOM05D004197 ORTHO05D004975 3.7e-53 211.5 120 80.0
Aa31LG10G13940 Aethionema arabicum HOM05D004197 ORTHO05D004975 4.8e-53 211.1 120 80.0
Manes.06G021100 Manihot esculenta HOM05D004197 ORTHO05D004975 4.8e-53 211.1 120 83.3
FvH4_7g06200 Fragaria vesca HOM05D004197 ORTHO05D004975 6.3e-53 210.7 120 80.8
RcHm_v2.0_Chr1g0333831 Rosa chinensis HOM05D004197 ORTHO05D004975 6.3e-53 210.7 120 80.0
Solyc04g014390.3 Solanum lycopersicum HOM05D004197 ORTHO05D004975 8.2e-53 210.3 120 80.0
Sopen04g006520 Solanum pennellii HOM05D004197 ORTHO05D004975 8.2e-53 210.3 120 80.0
Atru.chr4.2919 Acer truncatum HOM05D004197 ORTHO05D004975 1.8e-52 209.1 120 79.2
FAN01G1948 Fragaria x ananassa HOM05D004197 ORTHO05D004975 1.8e-52 209.1 120 80.0
FAN06G1493 Fragaria x ananassa HOM05D004197 ORTHO05D004975 1.8e-52 209.1 120 80.0
Prupe.1G206900 Prunus persica HOM05D004197 ORTHO05D004975 1.8e-52 209.1 120 81.7
AT3G59650 Arabidopsis thaliana HOM05D004197 ORTHO05D004975 2.4e-52 208.8 120 79.2
CARHR170020 Cardamine hirsuta HOM05D004197 ORTHO05D004975 2.4e-52 208.8 120 78.3
Ah.13g073520 Amaranthus hybridus HOM05D004197 ORTHO05D004975 3.1e-52 208.4 120 80.8
AL5G41720 Arabidopsis lyrata HOM05D004197 ORTHO05D004975 3.1e-52 208.4 120 78.3
Carub.0005s2637 Capsella rubella HOM05D004197 ORTHO05D004975 3.1e-52 208.4 120 78.3
CsaV3_4G002820 Cucumis sativus L. HOM05D004197 ORTHO05D004975 3.1e-52 208.4 120 76.7
THA.LOC104804007 Tarenaya hassleriana HOM05D004197 ORTHO05D004975 3.1e-52 208.4 120 80.0
arahy.Tifrunner.gnm1.ann1.4JR04K Arachis hypogaea HOM05D004197 ORTHO05D004975 4.1e-52 208.0 120 80.8
arahy.Tifrunner.gnm1.ann1.5DCW4K Arachis hypogaea HOM05D004197 ORTHO05D004975 4.1e-52 208.0 120 80.8
CiPaw.12G066300 Carya illinoinensis HOM05D004197 ORTHO05D004975 4.1e-52 208.0 120 79.2
FAN03G3355 Fragaria x ananassa HOM05D004197 ORTHO05D004975 4.1e-52 208.0 120 79.2
Os03g0207250 Oryza sativa ssp. japonica HOM05D004197 ORTHO05D004975 4.1e-52 208.0 120 80.0
arahy.Tifrunner.gnm1.ann1.E9H45Q Arachis hypogaea HOM05D004197 ORTHO05D004975 5.3e-52 207.6 118 81.4
unitig_899.g14470 Utricularia gibba HOM05D004197 ORTHO05D004975 5.3e-52 207.6 120 76.7
Eucgr.G02225 Eucalyptus grandis HOM05D004197 ORTHO05D004975 9.0e-52 206.8 120 80.8
BcaB02g07455 Brassica carinata HOM05D004197 ORTHO05D004975 1.2e-51 206.5 120 78.3
PGSC0003DMG401023624 Solanum tuberosum HOM05D004197 ORTHO05D004975 1.2e-51 206.5 120 79.2
AUR62023799 Chenopodium quinoa HOM05D004197 ORTHO05D004975 1.5e-51 206.1 120 79.2
HPP92_007604 Vanilla planifolia HOM05D004197 ORTHO05D004975 2.6e-51 205.3 120 80.0
BcaC07g40496 Brassica carinata HOM05D004197 ORTHO05D004975 3.4e-51 204.9 120 77.5
A09p51920 Brassica napus HOM05D004197 ORTHO05D004975 3.4e-51 204.9 120 77.5
C08p34650 Brassica napus HOM05D004197 ORTHO05D004975 3.4e-51 204.9 120 77.5
BolC8t51067H Brassica oleracea HOM05D004197 ORTHO05D004975 3.4e-51 204.9 120 77.5
BraA09t40628Z Brassica rapa HOM05D004197 ORTHO05D004975 3.4e-51 204.9 120 77.5
CDE02G1869 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 3.4e-51 204.9 118 79.7
Thhalv10006316m.g Eutrema salsugineum HOM05D004197 ORTHO05D004975 3.4e-51 204.9 120 77.5
Glyma.17G164900 Glycine max HOM05D004197 ORTHO05D004975 3.4e-51 204.9 118 79.7
BcaC08g44998 Brassica carinata HOM05D004197 ORTHO05D004975 4.5e-51 204.5 120 78.3
A07p24720 Brassica napus HOM05D000455 ORTHO05D000434 4.5e-51 204.5 120 78.3
C06p26290 Brassica napus HOM05D000455 ORTHO05D000434 4.5e-51 204.5 120 78.3
BolC6t37793H Brassica oleracea HOM05D004197 ORTHO05D004975 4.5e-51 204.5 120 78.3
BraA07t30117Z Brassica rapa HOM05D004197 ORTHO05D004975 4.5e-51 204.5 120 78.3
Sp5g03530 Schrenkiella parvula HOM05D004197 ORTHO05D004975 4.5e-51 204.5 120 77.5
Cfa015042 Carpinus fangiana HOM05D004197 ORTHO05D004975 7.7e-51 203.8 120 78.3
Lalb_Chr04g0253841 Lupinus albus HOM05D004197 ORTHO05D004975 7.7e-51 203.8 120 79.2
QL10p055721 Quercus lobata HOM05D004197 ORTHO05D004975 7.7e-51 203.8 118 81.4
Aqoxy7G00569 Aquilegia oxysepala HOM05D004197 ORTHO05D004975 1.3e-50 203.0 120 80.0
CANSAT80G2644 Cannabis sativa HOM05D004197 ORTHO05D004975 1.7e-50 202.6 120 78.3
TAR362G0244 Trochodendron aralioides HOM05D000090 ORTHO05D001584 1.7e-50 202.6 111 85.6
Zm00001eb400580 Zea mays HOM05D004197 ORTHO05D004975 1.7e-50 202.6 120 78.3
Glyma.05G102000 Glycine max HOM05D004197 ORTHO05D004975 2.9e-50 201.8 118 79.7
Potri.013G126200 Populus trichocarpa HOM05D004197 ORTHO05D004975 2.9e-50 201.8 120 78.3
Sed0002539 Sechium edule HOM05D004197 ORTHO05D004975 2.9e-50 201.8 120 77.5
ATR0733G162 Amborella trichopoda HOM05D004197 ORTHO05D004975 3.8e-50 201.4 120 77.5
EL10Ac3g06082 Beta vulgaris HOM05D004197 ORTHO05D004975 3.8e-50 201.4 120 77.5
Lalb_Chr10g0101191 Lupinus albus HOM05D004197 ORTHO05D004975 3.8e-50 201.4 120 78.3
Lj1g0017974 Lotus japonicus HOM05D004197 ORTHO05D004975 5.0e-50 201.1 115 79.1
Ca_10539_v3 Cicer arietinum L. HOM05D004197 ORTHO05D004975 8.5e-50 200.3 118 78.8
Ca_23424_v3 Cicer arietinum L. HOM05D004197 ORTHO05D004975 1.1e-49 199.9 118 79.7
TAR629G0957 Trochodendron aralioides HOM05D004197 ORTHO05D004975 1.9e-49 199.1 110 86.4
MD08G1230600 Malus domestica HOM05D004197 ORTHO05D004975 2.5e-49 198.7 117 79.5
Phvul.010G124900 Phaseolus vulgaris HOM05D004197 ORTHO05D004975 3.2e-49 198.4 111 82.9
Psat1g223520 Pisum sativum HOM05D004197 ORTHO05D004975 3.2e-49 198.4 118 77.1
TWI34G1638 Tripterygium wilfordii HOM05D004197 ORTHO05D004975 4.2e-49 198.0 144 70.1
TPR.G16667 Trifolium pratense HOM05D004197 ORTHO05D004975 7.2e-49 197.2 118 77.1
Medtr8g022770 Medicago truncatula HOM05D004197 ORTHO05D004975 1.2e-48 196.4 118 77.1
Sp2g07880 Schrenkiella parvula HOM05D004197 ORTHO05D004975 2.1e-48 195.7 120 74.2
Psat4g166320 Pisum sativum HOM05D004197 ORTHO05D004975 4.6e-48 194.5 120 73.3
QL04p073242 Quercus lobata HOM05D004197 ORTHO05D004975 1.0e-47 193.4 118 76.3
FAN24G1973 Fragaria x ananassa HOM05D004197 ORTHO05D004975 1.4e-47 193.0 110 80.0
Actinidia11444 Actinidia chinensis HOM05D005056 ORTHO05D006487 2.3e-47 192.2 110 80.9
FvH4_2g13530 Fragaria vesca HOM05D004197 ORTHO05D004975 2.3e-47 192.2 112 79.5
SGA_v2.0_scaffold49G18240 Striga asiatica HOM05D004197 ORTHO05D004975 6.7e-47 190.7 110 80.0
CDE09G0571 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 7.4e-46 187.2 110 79.1
TAR493G0004 Trochodendron aralioides HOM05D004197 ORTHO05D004975 3.4e-43 178.3 107 82.2
QL04p093649 Quercus lobata HOM05D004197 ORTHO05D004975 1.0e-42 176.8 111 74.8
HanXRQChr09g0264591 Helianthus annuus HOM05D004197 ORTHO05D004975 6.1e-40 167.5 94 81.9
arahy.Tifrunner.gnm1.ann1.XY21PC Arachis hypogaea HOM05D004197 ORTHO05D004975 7.9e-40 167.2 131 63.4
Mapoly0027s0066 Marchantia polymorpha HOM05D004197 ORTHO05D004975 1.8e-39 166.0 120 66.7
SEGI_18755 Sequoiadendron giganteum HOM05D004197 ORTHO05D004975 2.3e-39 165.6 115 65.2
AUR62002389 Chenopodium quinoa HOM05D004197 ORTHO05D004975 3.0e-39 165.2 213 44.6
Gorai.004G083000 Gossypium raimondii HOM05D004197 ORTHO05D004975 5.1e-39 164.5 95 80.0
MBI11_g23942_MAGBIO Magnolia biondii HOM05D004197 ORTHO05D004975 3.3e-38 161.8 95 81.1
Lj3g0000340 Lotus japonicus HOM05D004197 ORTHO05D004975 9.7e-38 160.2 119 68.1
C04p24770 Brassica napus HOM05D004197 ORTHO05D004975 2.2e-37 159.1 110 70.9
BolC4t23981H Brassica oleracea HOM05D004197 ORTHO05D004975 2.2e-37 159.1 110 70.9
SalBow2G3321 Salvia bowleyana HOM05D004197 ORTHO05D004975 3.7e-37 158.3 90 80.0
Gohir.D10G075200 Gossypium hirsutum HOM05D004197 ORTHO05D004975 6.3e-37 157.5 91 80.2
Gohir.D08G078000 Gossypium hirsutum HOM05D004197 ORTHO05D004975 1.1e-36 156.8 93 78.5
BcaC02g10824 Brassica carinata HOM05D004197 ORTHO05D004975 1.8e-36 156.0 110 70.0
Peaxi162Scf00474g00723 Petunia axillaris HOM05D004197 ORTHO05D004975 1.8e-36 156.0 120 65.0
SHI24203 Sapria himalayana HOM05D004197 ORTHO05D004975 1.8e-36 156.0 133 56.4
Gohir.D02G135200 Gossypium hirsutum HOM05D004197 ORTHO05D004975 4.1e-36 154.8 91 79.1
Gorai.011G081000 Gossypium raimondii HOM05D004197 ORTHO05D004975 2.0e-35 152.5 91 79.1
Sabra13G0105500 Salix brachista HOM05D004197 ORTHO05D004975 2.0e-35 152.5 169 50.9
Atru.chr12.1301 Acer truncatum HOM05D004197 ORTHO05D004975 4.5e-35 151.4 91 74.7
Gorai.005G151300 Gossypium raimondii HOM05D004197 ORTHO05D004975 4.5e-35 151.4 91 76.9
Rhsim02G0084000 Rhododendron simsii HOM05D004197 ORTHO05D004975 1.0e-34 150.2 85 82.4
Atru.chr12.1273 Acer truncatum HOM05D004197 ORTHO05D004975 1.3e-34 149.8 93 73.1
Pp3c1_20100 Physcomitrium patens HOM05D004197 ORTHO05D004975 3.8e-34 148.3 120 59.2
unitig_736.g22525 Utricularia gibba HOM05D000398 ORTHO05D000551 3.8e-34 148.3 86 73.3
DCAR_029674 Daucus carota HOM05D004197 ORTHO05D004975 6.5e-34 147.5 91 74.7
arahy.Tifrunner.gnm1.ann1.60591L Arachis hypogaea HOM05D004197 ORTHO05D004975 1.9e-33 146.0 136 59.6
Zm00001eb007240 Zea mays HOM05D004197 ORTHO05D004975 1.9e-33 146.0 91 74.7
DCAR_009572 Daucus carota HOM05D004197 ORTHO05D004975 3.2e-33 145.2 91 73.6
Gohir.D08G220700 Gossypium hirsutum HOM05D004197 ORTHO05D004975 3.3e-30 135.2 77 81.8
CARHR099320 Cardamine hirsuta HOM05D004197 ORTHO05D004975 1.3e-29 133.3 83 72.3
Lsat_1_v5_gn_6_23540 Lactuca sativa HOM05D004197 ORTHO05D004975 8.2e-29 130.6 95 66.3
TPR.G31074 Trifolium pratense HOM05D004197 ORTHO05D006502 1.0e-26 123.6 93 63.4
COL.COLO4_08144 Corchorus olitorius HOM05D004197 ORTHO05D004975 1.1e-25 120.2 62 85.5
Hma1.2p1_0150F.1_g066800 Hydrangea macrophylla HOM05D004197 ORTHO05D004975 1.5e-25 119.8 62 87.1
vmacro16589 Vaccinium macrocarpon HOM05D004197 ORTHO05D004975 1.5e-25 119.8 62 87.1
SMO347G0376 Selaginella moellendorffii HOM05D004197 ORTHO05D004975 9.4e-25 117.1 119 45.4
arahy.Tifrunner.gnm1.ann1.GGUP18 Arachis hypogaea HOM05D004197 ORTHO05D004975 3.6e-24 115.2 62 82.3
Gorai.004G076200 Gossypium raimondii HOM05D004197 ORTHO05D004975 1.0e-23 113.6 120 52.5
Cre06.g270650 Chlamydomonas reinhardtii HOM05D004197 ORTHO05D004975 2.0e-22 109.4 110 45.5
Glyma.07G044001 Glycine max HOM05D004197 ORTHO05D004975 8.3e-21 104.0 85 63.5
Lsat_1_v5_gn_2_131080 Lactuca sativa HOM05D004197 ORTHO05D004975 8.3e-21 104.0 82 64.6
arahy.Tifrunner.gnm1.ann1.HJ8Q1I Arachis hypogaea HOM05D004197 ORTHO05D004975 1.7e-18 96.3 56 75.0
Gohir.D04G172540 Gossypium hirsutum HOM05D004197 ORTHO05D004975 2.2e-18 95.9 62 74.2
Gorai.012G161800 Gossypium raimondii HOM05D004197 ORTHO05D004975 1.1e-17 93.6 62 72.6
MCO09G643 Micromonas commoda HOM05D004197 ORTHO05D004975 1.6e-16 89.7 115 39.1
Gorai.004G234500 Gossypium raimondii HOM05D004197 ORTHO05D004975 2.0e-14 82.8 57 70.2
Actinidia27110 Actinidia chinensis HOM05D004197 ORTHO05D004975 4.2e-09 65.1 44 68.2
Thecc.10G088100 Theobroma cacao HOM05D004197 ORTHO05D004975 1.4e-07 60.1 37 73.0


User provided reference genes

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