Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu016568.1 Olea europaea HOM05D013350 ORTHO05D020848 1.6e-98 362.8 200 100.0
Oeu003206.1 Olea europaea HOM05D013350 ORTHO05D020848 8.2e-58 227.6 145 81.4
Oeu014454.1 Olea europaea HOM05D013350 ORTHO05D020848 1.1e-46 190.7 129 77.5
Oeu011310.1 Olea europaea HOM05D013350 ORTHO05D020848 6.8e-28 128.3 118 61.9
MSTRG.5029 Avicennia marina HOM05D003531 ORTHO05D004354 1.3e-15 87.4 108 54.6
Nn2g15298 Nelumbo nucifera HOM05D003531 ORTHO05D004354 1.6e-13 80.5 129 43.4
SGA_v2.0_scaffold24G10668 Striga asiatica HOM05D003531 ORTHO05D004354 3.6e-13 79.3 109 47.7
Migut.N01608 Erythranthe guttata HOM05D003531 ORTHO05D004354 1.4e-12 77.4 107 48.6
Nn7g36242 Nelumbo nucifera HOM05D003531 ORTHO05D004354 3.1e-12 76.3 103 49.5
Cc02_g28130 Coffea canephora HOM05D003531 ORTHO05D004354 6.8e-12 75.1 106 46.2
MBI04_g44436_MAGBIO Magnolia biondii HOM05D003531 ORTHO05D004354 8.9e-12 74.7 106 45.3
TAR633G0763 Trochodendron aralioides HOM05D003531 ORTHO05D004354 3.4e-11 72.8 104 46.2
ECA248G0343 Erigeron canadensis HOM05D003531 ORTHO05D004354 1.3e-10 70.9 103 43.7
Lsat_1_v5_gn_1_106281 Lactuca sativa HOM05D003531 ORTHO05D004354 2.2e-10 70.1 116 41.4
unitig_8.g3623 Utricularia gibba HOM05D003531 ORTHO05D004354 2.9e-10 69.7 101 44.6
Lj9C634G4 Lonicera japonica HOM05D003531 ORTHO05D004354 3.8e-10 69.3 104 45.2
GSVIVG01032131001 Vitis vinifera HOM05D003531 ORTHO05D004354 8.4e-10 68.2 104 46.2
Manes.07G007000 Manihot esculenta HOM05D003531 ORTHO05D004354 3.2e-09 66.2 109 43.1
Actinidia21545 Actinidia chinensis HOM05D003531 ORTHO05D004354 4.1e-09 65.9 103 45.6
Sc11g0009100 Simmondsia chinensis HOM05D003531 ORTHO05D004354 4.1e-09 65.9 104 47.1
TWI73G0346 Tripterygium wilfordii HOM05D003531 ORTHO05D004354 4.1e-09 65.9 108 41.7
Cpa.g.sc125.24 Carica papaya HOM05D003531 ORTHO05D004354 7.1e-09 65.1 107 43.0
Oeu063180.2 Olea europaea HOM05D003531 ORTHO05D004354 7.1e-09 65.1 116 42.2
AL3G19400 Arabidopsis lyrata HOM05D003531 ORTHO05D004354 2.1e-08 63.5 117 41.0
MBI18_g27016_MAGBIO Magnolia biondii HOM05D003531 ORTHO05D020848 2.1e-08 63.5 95 41.1
DCAR_029680 Daucus carota HOM05D003531 ORTHO05D004354 3.5e-08 62.8 108 38.0
Manes.10G140700 Manihot esculenta HOM05D003531 ORTHO05D004354 3.5e-08 62.8 128 38.3
MBI18_g46194_MAGBIO Magnolia biondii HOM05D003531 ORTHO05D020848 4.6e-08 62.4 97 40.2
AUR62023077 Chenopodium quinoa HOM05D003531 ORTHO05D004354 6.0e-08 62.0 100 44.0
AUR62043479 Chenopodium quinoa HOM05D003531 ORTHO05D004354 6.0e-08 62.0 100 44.0
TWI09G1532 Tripterygium wilfordii HOM05D003531 ORTHO05D004354 6.0e-08 62.0 106 41.5
unitig_699.g19827 Utricularia gibba HOM05D013350 ORTHO05D020848 6.0e-08 62.0 84 40.5
ATR0332G091 Amborella trichopoda HOM05D003531 ORTHO05D004354 1.0e-07 61.2 103 43.7
Potri.001G264800 Populus trichocarpa HOM05D003531 ORTHO05D004354 1.3e-07 60.8 109 40.4
HanXRQChr17g0563011 Helianthus annuus HOM05D003531 ORTHO05D004354 1.7e-07 60.5 104 41.3
Sabra16G0162700 Salix brachista HOM05D003531 ORTHO05D004354 1.7e-07 60.5 110 41.8
TAR369G0316 Trochodendron aralioides HOM05D003531 ORTHO05D004354 2.3e-07 60.1 107 40.2
Carub.0003s0760 Capsella rubella HOM05D003531 ORTHO05D004354 3.0e-07 59.7 114 40.4
Sopen01g034360 Solanum pennellii HOM05D003531 ORTHO05D004354 3.0e-07 59.7 103 42.7
Solyc01g087390.2 Solanum lycopersicum HOM05D003531 ORTHO05D004354 5.1e-07 58.9 128 39.8
HanXRQChr09g0251321 Helianthus annuus HOM05D003531 ORTHO05D004354 6.6e-07 58.5 104 42.3
AT3G08020 Arabidopsis thaliana HOM05D003531 ORTHO05D004354 1.1e-06 57.8 117 40.2
Sed0002980 Sechium edule HOM05D003531 ORTHO05D004354 1.5e-06 57.4 105 41.0
Solyc01g087430.3 Solanum lycopersicum HOM05D003531 ORTHO05D004354 1.5e-06 57.4 107 40.2
Sopen01g034370 Solanum pennellii HOM05D003531 ORTHO05D004354 1.9e-06 57.0 107 40.2
Sopen01g034460 Solanum pennellii HOM05D003531 ORTHO05D004354 1.9e-06 57.0 107 44.9
CARHR082750 Cardamine hirsuta HOM05D003531 ORTHO05D004354 3.3e-06 56.2 118 37.3
CsaV3_7G030950 Cucumis sativus L. HOM05D003531 ORTHO05D004354 3.3e-06 56.2 110 40.9
Solyc01g087410.4 Solanum lycopersicum HOM05D003531 ORTHO05D004354 3.3e-06 56.2 107 43.9
ClCG09G004050 Citrullus lanatus HOM05D003531 ORTHO05D004354 4.3e-06 55.8 110 40.0
CDE05G0662 Ceratophyllum demersum HOM05D003531 ORTHO05D004354 7.3e-06 55.1 103 34.0
MELO3C023561.2 Cucumis melo HOM05D003531 ORTHO05D004354 7.3e-06 55.1 110 40.0
Potri.009G059500 Populus trichocarpa HOM05D003531 ORTHO05D004354 9.6e-06 54.7 106 36.8


User provided reference genes

Program Settings