Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu016511.2 Olea europaea HOM05D004508 ORTHO05D005180 1.0e-226 789.6 376 100.0
MSTRG.12061 Avicennia marina HOM05D004508 ORTHO05D005180 7.3e-140 501.1 389 64.3
SGA_v2.0_scaffold25G11118 Striga asiatica HOM05D004508 ORTHO05D005180 1.2e-139 500.4 383 65.3
SalBow5G3960 Salvia bowleyana HOM05D004508 ORTHO05D005180 1.6e-139 500.0 391 64.2
SalBow5G2183 Salvia bowleyana HOM05D004508 ORTHO05D005180 3.6e-139 498.8 391 64.2
SGA_v2.0_scaffold146G36178 Striga asiatica HOM05D004508 ORTHO05D005180 4.0e-138 495.4 383 64.8
Nitab4.5_0003534g0110 Nicotiana tabacum HOM05D004508 ORTHO05D005180 9.8e-137 490.7 394 62.7
Actinidia27434 Actinidia chinensis HOM05D004508 ORTHO05D005180 3.7e-136 488.8 390 62.1
Nitab4.5_0005465g0020 Nicotiana tabacum HOM05D004508 ORTHO05D005180 1.0e-133 480.7 394 61.7
PGSC0003DMG400003935 Solanum tuberosum HOM05D004508 ORTHO05D005180 1.7e-133 479.9 387 62.3
Sopen08g027840 Solanum pennellii HOM05D004508 ORTHO05D005180 3.9e-133 478.8 388 61.9
Cc08_g13230 Coffea canephora HOM05D004508 ORTHO05D005180 5.0e-133 478.4 394 61.4
Dinv37763 Davidia involucrata HOM05D004508 ORTHO05D005180 5.0e-133 478.4 392 61.5
Gohir.A12G221000 Gossypium hirsutum HOM05D004508 ORTHO05D005180 5.0e-133 478.4 392 62.0
Rhsim07G0101600 Rhododendron simsii HOM05D004508 ORTHO05D005180 5.0e-133 478.4 391 60.6
Thecc.03G261800 Theobroma cacao HOM05D004508 ORTHO05D005180 6.6e-133 478.0 388 61.9
Hma1.2p1_0108F.1_g051860 Hydrangea macrophylla HOM05D004508 ORTHO05D005180 8.6e-133 477.6 386 61.4
CSS0027133 Camellia sinensis var. sinensis HOM05D004508 ORTHO05D005180 4.3e-132 475.3 398 60.8
CSS0042805 Camellia sinensis var. sinensis HOM05D004508 ORTHO05D005180 4.3e-132 475.3 398 60.8
Solyc08g079470.3 Solanum lycopersicum HOM05D004508 ORTHO05D005180 4.3e-132 475.3 388 61.3
CiPaw.11G147500 Carya illinoinensis HOM05D004508 ORTHO05D005180 7.3e-132 474.6 393 60.3
Nitab4.5_0007591g0010 Nicotiana tabacum HOM05D004508 ORTHO05D005180 9.5e-132 474.2 388 61.6
CAN.G630.82 Capsicum annuum HOM05D004508 ORTHO05D005180 1.2e-131 473.8 394 60.4
Duzib205G1463 Durio zibethinus HOM05D004508 ORTHO05D005180 1.2e-131 473.8 392 61.7
Gohir.D12G223300 Gossypium hirsutum HOM05D004508 ORTHO05D005180 1.2e-131 473.8 392 61.5
Manes.01G073700 Manihot esculenta HOM05D004508 ORTHO05D005180 1.6e-131 473.4 387 60.7
TAR374G1167 Trochodendron aralioides HOM05D004508 ORTHO05D005180 3.6e-131 472.2 390 60.3
Gorai.008G239600 Gossypium raimondii HOM05D004508 ORTHO05D005180 4.7e-131 471.9 392 61.2
vmacro14042 Vaccinium macrocarpon HOM05D004508 ORTHO05D005180 8.1e-131 471.1 393 60.6
Ciclev10020216m.g Citrus clementina HOM05D004508 ORTHO05D005180 3.1e-130 469.2 397 59.9
Hma1.2p1_1654F.1_g295900 Hydrangea macrophylla HOM05D004508 ORTHO05D005180 5.2e-130 468.4 396 59.1
Sp6g05370 Schrenkiella parvula HOM05D004508 ORTHO05D005180 5.2e-130 468.4 392 59.9
CARHR254050 Cardamine hirsuta HOM05D004508 ORTHO05D005180 8.9e-130 467.6 392 59.4
Prupe.5G079500 Prunus persica HOM05D004508 ORTHO05D005180 1.2e-129 467.2 392 60.5
HanXRQChr17g0549071 Helianthus annuus HOM05D004508 ORTHO05D005180 2.6e-129 466.1 394 60.2
Cpa.g.sc29.91 Carica papaya HOM05D004508 ORTHO05D005180 3.4e-129 465.7 395 59.5
Lsat_1_v5_gn_3_3920 Lactuca sativa HOM05D004508 ORTHO05D005180 4.4e-129 465.3 397 58.4
BcaC04g21205 Brassica carinata HOM05D004508 ORTHO05D005180 9.8e-129 464.2 393 59.8
C09p34340 Brassica napus HOM05D004508 ORTHO05D005180 9.8e-129 464.2 393 59.8
BcaB01g01727 Brassica carinata HOM05D004508 ORTHO05D005180 1.3e-128 463.8 392 59.2
arahy.Tifrunner.gnm1.ann1.VMS6QR Arachis hypogaea HOM05D004508 ORTHO05D005180 1.7e-128 463.4 397 58.2
BolC9t56277H Brassica oleracea HOM05D004508 ORTHO05D005180 2.2e-128 463.0 386 60.6
ClCG10G003140 Citrullus lanatus HOM05D004508 ORTHO05D005180 2.9e-128 462.6 392 58.2
Eucgr.D01989 Eucalyptus grandis HOM05D004508 ORTHO05D005180 3.7e-128 462.2 390 59.0
arahy.Tifrunner.gnm1.ann1.CN31X8 Arachis hypogaea HOM05D004508 ORTHO05D005180 4.9e-128 461.8 397 57.9
GSVIVG01004911001 Vitis vinifera HOM05D004508 ORTHO05D005180 8.3e-128 461.1 391 59.1
Atru.chr9.1431 Acer truncatum HOM05D004508 ORTHO05D005180 1.1e-127 460.7 397 58.9
RcHm_v2.0_Chr7g0201591 Rosa chinensis HOM05D004508 ORTHO05D005180 1.4e-127 460.3 391 58.6
A09p27030 Brassica napus HOM05D004508 ORTHO05D005180 1.9e-127 459.9 392 59.4
BraA09t38274Z Brassica rapa HOM05D004508 ORTHO05D005180 1.9e-127 459.9 392 59.4
AT4G12130 Arabidopsis thaliana HOM05D004508 ORTHO05D005180 2.4e-127 459.5 392 58.9
FvH4_5g00670 Fragaria vesca HOM05D004508 ORTHO05D005180 3.2e-127 459.1 390 58.7
Thhalv10028714m.g Eutrema salsugineum HOM05D004508 ORTHO05D005180 4.1e-127 458.8 392 58.2
FAN08G3098 Fragaria x ananassa HOM05D004508 ORTHO05D005180 4.1e-127 458.8 390 58.5
CANSAT21G2188 Cannabis sativa HOM05D004508 ORTHO05D005180 7.1e-127 458.0 392 56.9
QL12p014971 Quercus lobata HOM05D004508 ORTHO05D005180 9.2e-127 457.6 390 57.7
AL6G47050 Arabidopsis lyrata HOM05D004508 ORTHO05D005180 1.6e-126 456.8 392 58.4
BcaC01g04604 Brassica carinata HOM05D004508 ORTHO05D005180 1.6e-126 456.8 385 60.0
TWI81G0341 Tripterygium wilfordii HOM05D004508 ORTHO05D005180 1.6e-126 456.8 393 59.0
Lj8C255T7 Lonicera japonica HOM05D004508 ORTHO05D005180 2.1e-126 456.4 394 59.6
FAN18G1402 Fragaria x ananassa HOM05D004508 ORTHO05D005180 2.7e-126 456.1 390 58.5
PGR031G2216 Punica granatum HOM05D004508 ORTHO05D005180 3.5e-126 455.7 388 58.2
RcHm_v2.0_Chr4g0419741 Rosa chinensis HOM05D004508 ORTHO05D005180 4.6e-126 455.3 391 58.1
MD04G1079500 Malus domestica HOM05D004508 ORTHO05D005180 6.0e-126 454.9 390 58.7
Aa31LG9G10340 Aethionema arabicum HOM05D004508 ORTHO05D005180 7.8e-126 454.5 398 57.3
BolC3t15891H Brassica oleracea HOM05D004508 ORTHO05D005180 7.8e-126 454.5 382 59.9
FAN04G0404 Fragaria x ananassa HOM05D004508 ORTHO05D005180 1.0e-125 454.1 390 58.5
BraA03t12150Z Brassica rapa HOM05D004508 ORTHO05D005180 1.3e-125 453.8 381 59.3
BcaB01g02657 Brassica carinata HOM05D004508 ORTHO05D005180 1.7e-125 453.4 384 59.4
Carub.0006s3132 Capsella rubella HOM05D004508 ORTHO05D005180 1.7e-125 453.4 392 57.7
Hund14651 Selenicereus undatus HOM05D004508 ORTHO05D005180 1.7e-125 453.4 389 59.4
FAN13G3174 Fragaria x ananassa HOM05D004508 ORTHO05D005180 2.3e-125 453.0 390 57.9
Aa31LG11G5140 Aethionema arabicum HOM05D004508 ORTHO05D005180 3.0e-125 452.6 399 57.6
Lj2g0024595 Lotus japonicus HOM05D004508 ORTHO05D005180 3.0e-125 452.6 394 57.9
Medtr3g078637 Medicago truncatula HOM05D004508 ORTHO05D005180 8.6e-125 451.1 391 56.8
Gorai.003G166400 Gossypium raimondii HOM05D004508 ORTHO05D005180 1.9e-124 449.9 385 62.1
Sed0020035 Sechium edule HOM05D004508 ORTHO05D005180 1.9e-124 449.9 391 57.5
Potri.001G117700 Populus trichocarpa HOM05D004508 ORTHO05D005180 2.5e-124 449.5 392 57.7
Phvul.002G060100 Phaseolus vulgaris HOM05D004508 ORTHO05D005180 9.5e-124 447.6 391 57.0
TWI60G0362 Tripterygium wilfordii HOM05D004508 ORTHO05D005180 1.2e-123 447.2 390 57.7
Haze_02980 Corylus avellana HOM05D004508 ORTHO05D005180 2.8e-123 446.0 418 55.3
Glyma.11G029800 Glycine max HOM05D004508 ORTHO05D005180 2.8e-123 446.0 388 57.2
PSO782G0229 Papaver somniferum HOM05D004508 ORTHO05D005180 2.8e-123 446.0 392 57.7
Sc07g0009440 Simmondsia chinensis HOM05D004508 ORTHO05D005180 2.8e-123 446.0 396 57.1
Aa31LG11G5170 Aethionema arabicum HOM05D004508 ORTHO05D005180 6.2e-123 444.9 410 55.4
Peaxi162Scf00271g00023 Petunia axillaris HOM05D004508 ORTHO05D005180 1.1e-122 444.1 393 59.0
CsaV3_3G003200 Cucumis sativus L. HOM05D004508 ORTHO05D005180 2.3e-122 443.0 390 55.9
Lj4g0011407 Lotus japonicus HOM05D004508 ORTHO05D005180 2.3e-122 443.0 385 58.4
Ca_16218_v3 Cicer arietinum L. HOM05D004508 ORTHO05D005180 5.2e-122 441.8 390 57.2
EL10Ac5g12616 Beta vulgaris HOM05D004508 ORTHO05D005180 1.5e-121 440.3 382 57.6
unitig_8.g3903 Utricularia gibba HOM05D004508 ORTHO05D005180 1.5e-121 440.3 383 56.9
ECA246G1898 Erigeron canadensis HOM05D004508 ORTHO05D005180 4.9e-120 435.3 391 56.3
CDE04G2826 Ceratophyllum demersum HOM05D004508 ORTHO05D005180 1.9e-119 433.3 384 55.2
VMungo1215G0237 Vigna mungo HOM05D004508 ORTHO05D005180 4.1e-119 432.2 370 58.6
Ah.12g058230 Amaranthus hybridus HOM05D004508 ORTHO05D005180 1.6e-118 430.3 396 53.5
Lalb_Chr25g0283101 Lupinus albus HOM05D004508 ORTHO05D005180 1.7e-117 426.8 379 56.5
ECA234G2416 Erigeron canadensis HOM05D004508 ORTHO05D005180 6.6e-117 424.9 390 55.4
ATR0757G012 Amborella trichopoda HOM05D004508 ORTHO05D005180 1.5e-113 413.7 395 53.4
PSO478G4546 Papaver somniferum HOM05D004508 ORTHO05D005180 2.0e-113 413.3 462 48.9
COL.COLO4_23880 Corchorus olitorius HOM05D004508 ORTHO05D005180 4.4e-113 412.1 386 54.9
C03p35810 Brassica napus HOM05D004508 ORTHO05D005180 2.9e-112 409.5 340 61.8
HPP92_014947 Vanilla planifolia HOM05D004508 ORTHO05D005180 3.2e-111 406.0 391 54.2
HPP92_014982 Vanilla planifolia HOM05D004508 ORTHO05D005180 3.2e-111 406.0 391 54.2
AUR62010510 Chenopodium quinoa HOM05D004508 ORTHO05D005180 4.6e-110 402.1 386 53.9
Os06g0134800 Oryza sativa ssp. japonica HOM05D004508 ORTHO05D005180 1.9e-108 396.7 395 51.9
Sabra01G0090400 Salix brachista HOM05D004508 ORTHO05D005180 3.3e-108 396.0 393 52.7
Zm00001eb377920 Zea mays HOM05D004508 ORTHO05D005180 7.6e-105 384.8 395 50.1
Oeu022318.1 Olea europaea HOM05D004508 ORTHO05D005180 2.1e-102 376.7 236 77.5
Nn2g12338 Nelumbo nucifera HOM05D004508 ORTHO05D005180 2.3e-101 373.2 295 63.1
Dinv39078 Davidia involucrata HOM05D004508 ORTHO05D005180 7.3e-100 368.2 363 53.7
SEGI_30484 Sequoiadendron giganteum HOM05D004508 ORTHO05D005180 3.1e-98 362.8 379 48.8
Pp3c2_10920 Physcomitrium patens HOM05D004508 ORTHO05D005180 5.8e-97 358.6 380 49.2
Pp3c14_15790 Physcomitrium patens HOM05D004508 ORTHO05D005180 8.4e-96 354.8 390 46.4
AagrBONN_evm.TU.Sc2ySwM_344.736 Anthoceros agrestis HOM05D004508 ORTHO05D005180 9.3e-95 351.3 381 48.3
SMO165G0061 Selaginella moellendorffii HOM05D004508 ORTHO05D005180 3.5e-94 349.4 379 48.0
Psat1g081320 Pisum sativum HOM05D004508 ORTHO05D005180 5.1e-93 345.5 274 60.9
Psat5g109880 Pisum sativum HOM05D004508 ORTHO05D005180 6.7e-93 345.1 274 61.3
Mapoly0014s0047 Marchantia polymorpha HOM05D004508 ORTHO05D005180 1.9e-92 343.6 386 45.9
C07p28450 Brassica napus HOM05D004508 ORTHO05D005180 6.2e-91 338.6 287 57.1
Migut.A00834 Erythranthe guttata HOM05D004508 ORTHO05D005180 6.2e-91 338.6 236 69.1
SMO230G0075 Selaginella moellendorffii HOM05D004508 ORTHO05D005180 1.5e-89 334.0 377 45.1
MBI04_g30221_MAGBIO Magnolia biondii HOM05D004508 ORTHO05D005180 1.3e-88 330.9 618 35.0
CiPaw.12G105000 Carya illinoinensis HOM05D004508 ORTHO05D005180 1.4e-87 327.4 391 47.1
Glyma.01G212000 Glycine max HOM05D004508 ORTHO05D005180 1.9e-87 327.0 282 57.1
VMungo1215G2974 Vigna mungo HOM05D004508 ORTHO05D005180 3.2e-87 326.2 276 58.0
A03p29560 Brassica napus HOM05D004508 ORTHO05D005180 2.5e-84 316.6 276 55.1
AagrBONN_evm.TU.Sc2ySwM_344.739 Anthoceros agrestis HOM05D004508 ORTHO05D005180 4.8e-83 312.4 366 46.4
BolC7t43385H Brassica oleracea HOM05D004508 ORTHO05D005180 2.4e-82 310.1 267 55.8
BcaC06g34438 Brassica carinata HOM05D004508 ORTHO05D005180 4.1e-82 309.3 260 57.3
CBR_g46688 Chara braunii HOM05D004508 ORTHO05D005180 4.2e-79 299.3 404 41.6
PSO017G0573 Papaver somniferum HOM05D004508 ORTHO05D005180 4.6e-78 295.8 273 55.3
AUR62017391 Chenopodium quinoa HOM05D004508 ORTHO05D005180 1.8e-77 293.9 261 55.9
Gohir.D03G157900 Gossypium hirsutum HOM05D004508 ORTHO05D005180 7.9e-70 268.5 227 63.4
MELO3C013985.2 Cucumis melo HOM05D004508 ORTHO05D005180 4.8e-67 259.2 219 55.7
Eucgr.D02019 Eucalyptus grandis HOM05D004508 ORTHO05D005180 9.4e-63 245.0 385 39.0
TPR.G214 Trifolium pratense HOM05D004508 ORTHO05D005180 5.9e-57 225.7 184 59.2
Gohir.A03G011900 Gossypium hirsutum HOM05D004508 ORTHO05D005180 1.4e-50 204.5 254 50.0
Lsat_1_v5_gn_3_76480 Lactuca sativa HOM05D004508 ORTHO05D005180 1.7e-43 181.0 188 53.7
vmacro17466 Vaccinium macrocarpon HOM05D004508 ORTHO05D005180 2.7e-41 173.7 154 55.8
AagrBONN_evm.TU.Sc2ySwM_344.731 Anthoceros agrestis HOM05D004508 ORTHO05D005180 1.1e-39 168.3 198 43.9
MELO3C021762.2 Cucumis melo HOM05D004508 ORTHO05D005180 4.0e-37 159.8 118 61.0
MCO07G558 Micromonas commoda HOM05D004508 ORTHO05D005180 6.8e-37 159.1 391 33.5
VMungo1215G1224 Vigna mungo HOM05D004508 ORTHO05D005180 2.5e-31 140.6 119 58.8
Duzib084G0179 Durio zibethinus HOM05D004508 ORTHO05D005180 4.0e-29 133.3 147 53.1
Nn8g40647 Nelumbo nucifera HOM05D004508 ORTHO05D005180 2.9e-27 127.1 200 40.5
CSS0024785 Camellia sinensis var. sinensis HOM05D004508 ORTHO05D005180 2.4e-26 124.0 119 53.8
Cre10.g459000 Chlamydomonas reinhardtii HOM05D004508 ORTHO05D005180 2.4e-26 124.0 260 31.9
PRCOL_00002067 Prasinoderma coloniale HOM05D004508 ORTHO05D005180 2.4e-26 124.0 371 27.2
BolC6t40022H Brassica oleracea HOM05D004508 ORTHO05D005180 4.9e-19 99.8 90 54.4
Cfa023844 Carpinus fangiana HOM05D004508 ORTHO05D005180 5.4e-18 96.3 273 28.6
BcaC06g35234 Brassica carinata HOM05D004508 ORTHO05D005180 4.6e-17 93.2 68 60.3
SGA_v2.0_scaffold120G32815 Striga asiatica HOM05D004508 ORTHO05D005180 1.6e-14 84.7 55 65.5
BolC7t43387H Brassica oleracea HOM05D004508 ORTHO05D005180 8.1e-14 82.4 119 42.9
C03p35830 Brassica napus HOM05D004508 ORTHO05D005180 2.6e-12 77.4 119 41.2
C07p28470 Brassica napus HOM05D004508 ORTHO05D005180 2.9e-11 73.9 119 40.3
BolC3t15893H Brassica oleracea HOM05D004508 ORTHO05D005180 3.9e-08 63.5 44 52.3
CDE04G3100 Ceratophyllum demersum HOM05D004508 ORTHO05D005180 6.6e-08 62.8 54 51.9


User provided reference genes

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