Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu016401.1 Olea europaea HOM05D000922 ORTHO05D007418 0.0e+00 1927.5 969 100.0
MSTRG.23139 Avicennia marina HOM05D000922 ORTHO05D007418 1.9e-309 1065.8 978 59.9
SalBow5G3118 Salvia bowleyana HOM05D000922 ORTHO05D007418 5.0e-294 1014.6 980 57.3
Migut.O00098 Erythranthe guttata HOM05D000922 ORTHO05D007418 5.8e-290 1001.1 972 57.2
SalBow5G1735 Salvia bowleyana HOM05D000922 ORTHO05D007418 2.9e-289 998.8 980 56.7
Lj9A446G57 Lonicera japonica HOM05D000922 ORTHO05D007418 1.6e-244 850.1 975 51.4
SGA_v2.0_scaffold90G27900 Striga asiatica HOM05D000922 ORTHO05D007418 3.1e-243 845.9 955 52.5
Cc04_g12110 Coffea canephora HOM05D000922 ORTHO05D007418 1.7e-241 840.1 949 52.1
Peaxi162Scf00255g01019 Petunia axillaris HOM05D000922 ORTHO05D007418 2.0e-234 816.6 1038 47.9
CSS0017974 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D007418 3.4e-234 815.8 1039 48.3
Nitab4.5_0001514g0050 Nicotiana tabacum HOM05D000922 ORTHO05D007418 2.9e-233 812.8 1029 48.2
GSVIVG01007724001 Vitis vinifera HOM05D000922 ORTHO05D007418 4.2e-232 808.9 976 49.9
Hma1.2p1_2469F.1_g322680 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 1.3e-225 787.3 1037 48.2
Thecc.03G014400 Theobroma cacao HOM05D000922 ORTHO05D007418 1.9e-224 783.5 987 48.5
Atru.chr9.2494 Acer truncatum HOM05D000922 ORTHO05D007418 7.2e-224 781.6 1043 47.7
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 9.4e-224 781.2 1038 47.8
MD06G1172500 Malus domestica HOM05D000922 ORTHO05D007418 2.0e-221 773.5 1051 46.4
FvH4_5g05470 Fragaria vesca HOM05D000922 ORTHO05D007418 1.2e-218 764.2 1032 47.2
Sabra15G0102900 Salix brachista HOM05D000922 ORTHO05D007418 4.5e-218 762.3 1029 46.5
FAN18G1332 Fragaria x ananassa HOM05D000922 ORTHO05D007418 3.8e-217 759.2 1032 47.1
Cfa019149 Carpinus fangiana HOM05D000922 ORTHO05D007418 6.5e-217 758.4 1081 45.7
FAN08G1289 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.1e-216 757.7 1036 46.6
Hma1.2p1_2165F.1_g315780 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 3.2e-216 756.1 783 54.4
RcHm_v2.0_Chr7g0193371 Rosa chinensis HOM05D000922 ORTHO05D007418 1.2e-215 754.2 1024 47.1
MD14G1178400 Malus domestica HOM05D000922 ORTHO05D007418 1.6e-215 753.8 1033 46.6
Potri.012G082500 Populus trichocarpa HOM05D000922 ORTHO05D007418 2.7e-215 753.1 999 47.3
CiPaw.11G024700 Carya illinoinensis HOM05D000922 ORTHO05D007418 1.0e-214 751.1 1062 45.6
QL10p011002 Quercus lobata HOM05D000922 ORTHO05D007418 1.0e-214 751.1 1005 46.5
Prupe.5G171800 Prunus persica HOM05D000922 ORTHO05D007418 6.7e-214 748.4 1054 45.8
Gorai.008G296200 Gossypium raimondii HOM05D000922 ORTHO05D007418 1.5e-213 747.3 979 46.7
Manes.14G064400 Manihot esculenta HOM05D000922 ORTHO05D007418 2.8e-212 743.0 1035 46.2
Potri.015G078300 Populus trichocarpa HOM05D000922 ORTHO05D007418 4.8e-212 742.3 1007 46.3
Duzib205G1607 Durio zibethinus HOM05D000922 ORTHO05D007418 8.2e-212 741.5 944 47.6
Gohir.D12G275700 Gossypium hirsutum HOM05D000922 ORTHO05D007418 2.4e-211 740.0 979 46.4
TAR622G0946 Trochodendron aralioides HOM05D000922 ORTHO05D007418 1.2e-210 737.6 1072 44.8
FAN18G2587 Fragaria x ananassa HOM05D000922 ORTHO05D007418 3.5e-210 736.1 1080 44.9
Haze_07516 Corylus avellana HOM05D000922 ORTHO05D007418 4.5e-210 735.7 1104 43.8
unitig_26.g9619 Utricularia gibba HOM05D000922 ORTHO05D007418 1.3e-209 734.2 972 46.0
Sabra12G0059200 Salix brachista HOM05D000922 ORTHO05D007418 2.9e-209 733.0 1018 45.9
DCAR_016480 Daucus carota HOM05D000922 ORTHO05D007418 9.4e-208 728.0 1035 45.6
FAN04G3074 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.4e-206 724.2 846 50.0
FAN13G2825 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.8e-206 723.8 1083 44.4
Peaxi162Scf00089g01840 Petunia axillaris HOM05D000922 ORTHO05D007418 2.0e-205 720.3 787 50.8
Sc04g0001750 Simmondsia chinensis HOM05D000922 ORTHO05D007418 5.7e-205 718.8 1021 45.2
CAN.G1166.3 Capsicum annuum HOM05D000922 ORTHO05D007418 9.7e-205 718.0 773 51.2
Ciclev10018588m.g Citrus clementina HOM05D000922 ORTHO05D007418 4.8e-204 715.7 1063 44.7
Sopen03g031910 Solanum pennellii HOM05D000922 ORTHO05D007418 1.1e-203 714.5 972 45.5
Duzib068G1349 Durio zibethinus HOM05D000922 ORTHO05D007418 4.0e-198 696.0 982 45.2
Lsat_1_v5_gn_5_15041 Lactuca sativa HOM05D000922 ORTHO05D007418 8.8e-198 694.9 974 45.4
CANSAT80G2096 Cannabis sativa HOM05D000922 ORTHO05D007418 7.5e-197 691.8 1050 43.6
TWI23G1000 Tripterygium wilfordii HOM05D000922 ORTHO05D007418 1.1e-195 688.0 984 45.2
arahy.Tifrunner.gnm1.ann1.9TFG5W Arachis hypogaea HOM05D000922 ORTHO05D007418 9.1e-195 684.9 1016 43.7
Nn4g22714 Nelumbo nucifera HOM05D000922 ORTHO05D007418 6.6e-193 678.7 1116 41.0
arahy.Tifrunner.gnm1.ann1.F0ZNJX Arachis hypogaea HOM05D000922 ORTHO05D007418 1.1e-192 677.9 1015 43.6
Eucgr.B00297 Eucalyptus grandis HOM05D000922 ORTHO05D007418 1.1e-192 677.9 1030 43.1
PSO478G1387 Papaver somniferum HOM05D000922 ORTHO05D007418 1.4e-190 671.0 1022 42.8
PGR083G1532 Punica granatum HOM05D000922 ORTHO05D007418 3.0e-190 669.8 1000 43.3
PSO017G6576 Papaver somniferum HOM05D000922 ORTHO05D007418 4.4e-189 666.0 1026 42.8
Aqoxy3G02884 Aquilegia oxysepala HOM05D000922 ORTHO05D007418 4.9e-188 662.5 1061 42.3
ClCG06G017060 Citrullus lanatus HOM05D000922 ORTHO05D007418 8.3e-188 661.8 1055 41.1
vmacro19399 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 7.0e-187 658.7 455 69.9
Dinv38573 Davidia involucrata HOM05D000922 ORTHO05D007418 9.2e-187 658.3 701 52.5
AUR62008194 Chenopodium quinoa HOM05D000922 ORTHO05D007418 1.7e-185 654.1 953 44.3
HanXRQChr05g0155771 Helianthus annuus HOM05D000922 ORTHO05D007418 2.9e-185 653.3 984 44.1
Ca_16166_v3 Cicer arietinum L. HOM05D000922 ORTHO05D007418 1.9e-184 650.6 969 43.7
Glyma.04G184600 Glycine max HOM05D000922 ORTHO05D007418 7.3e-184 648.7 978 43.0
Hund02754 Selenicereus undatus HOM05D000922 ORTHO05D007418 9.5e-184 648.3 993 44.4
Solyc03g112830.4 Solanum lycopersicum HOM05D000922 ORTHO05D007418 2.1e-183 647.1 968 43.0
AUR62030946 Chenopodium quinoa HOM05D000922 ORTHO05D007418 1.8e-182 644.0 980 43.1
Thhalv10010097m.g Eutrema salsugineum HOM05D000922 ORTHO05D007418 9.8e-181 638.3 945 43.0
Glyma.06G181100 Glycine max HOM05D000922 ORTHO05D007418 9.8e-181 638.3 982 42.0
Sed0021678 Sechium edule HOM05D000922 ORTHO05D007418 8.3e-180 635.2 1017 41.6
Sp5g13830 Schrenkiella parvula HOM05D000922 ORTHO05D007418 1.9e-179 634.0 983 43.0
Gohir.A12G275000 Gossypium hirsutum HOM05D000922 ORTHO05D007418 7.0e-179 632.1 920 44.1
CARHR156940 Cardamine hirsuta HOM05D000922 ORTHO05D007418 1.2e-178 631.3 951 42.8
Psat0ss3962g0400 Pisum sativum HOM05D000922 ORTHO05D007418 1.2e-178 631.3 946 43.0
Carub.0005s1432 Capsella rubella HOM05D000922 ORTHO05D007418 2.7e-178 630.2 990 41.6
Lj1g0015886 Lotus japonicus HOM05D000922 ORTHO05D007418 6.0e-178 629.0 956 42.6
THA.LOC104798972 Tarenaya hassleriana HOM05D000922 ORTHO05D007418 3.0e-177 626.7 998 42.2
Aa31LG4G16800 Aethionema arabicum HOM05D000922 ORTHO05D007418 5.0e-177 625.9 984 41.7
AL5G27540 Arabidopsis lyrata HOM05D000922 ORTHO05D007418 4.3e-176 622.9 995 42.0
Phvul.009G177300 Phaseolus vulgaris HOM05D000922 ORTHO05D007418 5.6e-176 622.5 965 42.4
EL10Ac5g10730 Beta vulgaris HOM05D000922 ORTHO05D007418 1.8e-174 617.5 980 42.6
Medtr3g077620 Medicago truncatula HOM05D000922 ORTHO05D007418 8.9e-174 615.1 966 42.3
TPR.G20687 Trifolium pratense HOM05D000922 ORTHO05D007418 8.9e-174 615.1 960 42.5
BcaB05g22925 Brassica carinata HOM05D000922 ORTHO05D007418 7.5e-173 612.1 991 40.4
Lalb_Chr23g0273281 Lupinus albus HOM05D000922 ORTHO05D007418 9.8e-173 611.7 452 67.3
Nitab4.5_0000025g0520 Nicotiana tabacum HOM05D000922 ORTHO05D007418 1.3e-172 611.3 906 43.9
MELO3C017091.2 Cucumis melo HOM05D000922 ORTHO05D007418 3.2e-171 606.7 1033 40.4
AT3G48195 Arabidopsis thaliana HOM05D000922 ORTHO05D007418 4.1e-171 606.3 941 42.2
VMungo1309G1607 Vigna mungo HOM05D000922 ORTHO05D007418 4.1e-171 606.3 961 41.9
Ah.02g110580 Amaranthus hybridus HOM05D000922 ORTHO05D007418 7.0e-171 605.5 1058 39.5
BolC1t03155H Brassica oleracea HOM05D000922 ORTHO05D007418 3.9e-169 599.7 946 41.6
BraA01t02462Z Brassica rapa HOM05D000922 ORTHO05D007418 1.2e-167 594.7 932 41.2
BcaC09g49852 Brassica carinata HOM05D000922 ORTHO05D007418 6.2e-167 592.4 946 41.4
A01p25510 Brassica napus HOM05D000922 ORTHO05D007418 1.2e-162 578.2 460 61.7
HPP92_009707 Vanilla planifolia HOM05D000922 ORTHO05D007418 3.0e-161 573.5 968 39.6
ATR1091G081 Amborella trichopoda HOM05D000922 ORTHO05D007418 1.6e-151 541.2 1043 37.9
CDE06G1806 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 8.4e-148 528.9 1005 38.2
Os01g0549500 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D007418 7.1e-147 525.8 476 55.0
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 2.7e-146 523.9 1033 38.3
Actinidia33077 Actinidia chinensis HOM05D000922 ORTHO05D007418 2.1e-135 487.6 513 52.2
Actinidia19330 Actinidia chinensis HOM05D000922 ORTHO05D007418 5.3e-126 456.4 868 39.1
CsaV3_1G001450 Cucumis sativus L. HOM05D000922 ORTHO05D007418 1.2e-125 455.3 915 37.5
Zm00001eb162380 Zea mays HOM05D000922 ORTHO05D007418 1.9e-123 448.0 417 55.6
COL.COLO4_30068 Corchorus olitorius HOM05D000922 ORTHO05D007418 6.3e-119 433.0 845 37.5
SEGI_24933 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 2.1e-114 417.9 524 45.8
SHI17077 Sapria himalayana HOM05D000922 ORTHO05D007418 1.2e-109 402.1 725 36.3
Mapoly0023s0026 Marchantia polymorpha HOM05D000922 ORTHO05D007418 3.2e-107 394.0 489 45.4
SMO367G0209 Selaginella moellendorffii HOM05D000922 ORTHO05D007418 7.9e-106 389.4 478 43.3
SEGI_19196 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 1.5e-104 385.2 432 47.9
Pp3c26_1280 Physcomitrium patens HOM05D000922 ORTHO05D007418 9.4e-99 365.9 489 41.7
Cpa.g.sc2974.2 Carica papaya HOM05D000922 ORTHO05D007418 4.5e-93 347.1 212 75.5
ECA246G0682 Erigeron canadensis HOM05D000922 ORTHO05D007418 2.0e-72 278.5 696 32.8
Cpa.g.sc2974.1 Carica papaya HOM05D000922 ORTHO05D007418 2.6e-72 278.1 748 34.8
C01p31950 Brassica napus HOM05D000922 ORTHO05D007418 1.2e-61 242.7 683 31.9
ECA246G4214 Erigeron canadensis HOM05D000922 ORTHO05D007418 4.0e-49 201.1 122 74.6
Dinv20638 Davidia involucrata HOM05D000922 ORTHO05D007418 4.6e-45 187.6 124 75.0
CDE07G0520 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 3.9e-28 131.3 279 31.9
vmacro19400 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 1.1e-27 129.8 583 29.2
Lalb_Chr23g0273291 Lupinus albus HOM05D000922 ORTHO05D007418 8.7e-20 103.6 541 25.9
PRCOL_00005721 Prasinoderma coloniale HOM05D000922 ORTHO05D007418 5.6e-19 100.9 305 29.2
Psat4g066520 Pisum sativum HOM05D001026 ORTHO05D007418 2.0e-16 92.4 91 54.9
Peaxi162Scf00397g00009 Petunia axillaris HOM05D000922 ORTHO05D015732 6.7e-12 77.4 58 58.6
Peaxi162Scf00009g02111 Petunia axillaris HOM05D000861 ORTHO05D007418 1.1e-11 76.6 49 69.4
Peaxi162Scf01130g00212 Petunia axillaris HOM05D000861 ORTHO05D007418 1.1e-11 76.6 49 69.4
Peaxi162Scf00470g00024 Petunia axillaris HOM05D000861 ORTHO05D007418 2.5e-11 75.5 89 44.9
CAN.G1651.1 Capsicum annuum HOM05D003439 ORTHO05D000484 2.8e-10 72.0 48 66.7
Actinidia33076 Actinidia chinensis HOM05D000922 ORTHO05D007418 6.3e-10 70.9 65 60.0
Peaxi162Scf00304g01332 Petunia axillaris HOM05D000922 ORTHO05D007418 6.3e-10 70.9 49 63.3
Dinv38572 Davidia involucrata HOM05D000922 ORTHO05D008200 3.1e-09 68.6 134 45.5
Cfa000646 Carpinus fangiana HOM05D000922 ORTHO05D007418 7.2e-06 57.4 34 70.6


User provided reference genes

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