Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu016332.2 Olea europaea HOM05D006519 ORTHO05D008306 8.1e-163 577.0 291 100.0
Migut.I00056 Erythranthe guttata HOM05D006519 ORTHO05D008306 1.8e-117 426.4 302 73.8
MSTRG.11426 Avicennia marina HOM05D006519 ORTHO05D008306 1.7e-112 409.8 297 73.4
Nitab4.5_0003386g0010 Nicotiana tabacum HOM05D006519 ORTHO05D008306 3.0e-109 399.1 279 72.4
Solyc03g113860.2 Solanum lycopersicum HOM05D006519 ORTHO05D008306 5.1e-109 398.3 277 73.3
Cc04_g13570 Coffea canephora HOM05D006519 ORTHO05D008306 6.7e-109 397.9 289 68.2
PGSC0003DMG400024585 Solanum tuberosum HOM05D006519 ORTHO05D008306 1.5e-108 396.7 280 73.2
Sopen03g032910 Solanum pennellii HOM05D006519 ORTHO05D008306 5.7e-108 394.8 277 72.9
CAN.G853.13 Capsicum annuum HOM05D006519 ORTHO05D008306 6.3e-107 391.3 281 72.6
CiPaw.11G031700 Carya illinoinensis HOM05D006519 ORTHO05D008306 4.1e-106 388.7 275 71.6
Gorai.012G002000 Gossypium raimondii HOM05D006519 ORTHO05D008306 4.1e-106 388.7 281 69.0
ECA232G3316 Erigeron canadensis HOM05D006519 ORTHO05D008306 6.9e-106 387.9 291 68.7
RcHm_v2.0_Chr7g0179701 Rosa chinensis HOM05D006519 ORTHO05D008306 1.5e-105 386.7 291 68.0
SalBow5G0752 Salvia bowleyana HOM05D006519 ORTHO05D008306 1.5e-105 386.7 338 61.8
SalBow5G4476 Salvia bowleyana HOM05D006519 ORTHO05D008306 2.0e-105 386.3 338 61.8
Sc12g0005660 Simmondsia chinensis HOM05D006519 ORTHO05D008306 1.0e-104 384.0 283 70.0
CSS0018091 Camellia sinensis var. sinensis HOM05D006519 ORTHO05D008306 1.7e-104 383.3 293 66.9
CSS0037543 Camellia sinensis var. sinensis HOM05D006519 ORTHO05D008306 2.2e-104 382.9 293 66.9
Gohir.D04G001000 Gossypium hirsutum HOM05D006519 ORTHO05D008306 2.9e-104 382.5 279 68.1
Lsat_1_v5_gn_4_73480 Lactuca sativa HOM05D006519 ORTHO05D008306 8.5e-104 380.9 291 66.3
MD06G1181000 Malus domestica HOM05D006519 ORTHO05D008306 8.5e-104 380.9 275 69.5
Actinidia34959 Actinidia chinensis HOM05D006519 ORTHO05D008306 1.1e-103 380.6 277 68.6
HanXRQChr09g0271821 Helianthus annuus HOM05D006519 ORTHO05D008306 1.4e-103 380.2 285 66.3
Haze_07439 Corylus avellana HOM05D006519 ORTHO05D008306 1.9e-103 379.8 275 69.5
Gohir.A05G415200 Gossypium hirsutum HOM05D006519 ORTHO05D008306 3.2e-103 379.0 271 68.3
TAR629G1196 Trochodendron aralioides HOM05D006519 ORTHO05D008306 5.5e-103 378.3 277 69.7
CANSAT80G0931 Cannabis sativa HOM05D006519 ORTHO05D008306 9.4e-103 377.5 276 69.6
Duzib068G0259 Durio zibethinus HOM05D006519 ORTHO05D008306 9.4e-103 377.5 280 68.2
DCAR_031285 Daucus carota HOM05D006519 ORTHO05D008306 1.6e-102 376.7 291 68.4
Prupe.5G179000 Prunus persica HOM05D006519 ORTHO05D008306 1.0e-101 374.0 276 69.6
TWI81G0852 Tripterygium wilfordii HOM05D006519 ORTHO05D008306 6.7e-101 371.3 285 66.0
Thecc.03G004500 Theobroma cacao HOM05D006519 ORTHO05D008306 3.3e-100 369.0 283 65.7
GSVIVG01007824001 Vitis vinifera HOM05D006519 ORTHO05D008306 3.3e-100 369.0 278 68.0
FvH4_5g16400 Fragaria vesca HOM05D006519 ORTHO05D008306 4.4e-100 368.6 287 64.8
FAN18G3891 Fragaria x ananassa HOM05D006519 ORTHO05D008306 4.4e-100 368.6 287 64.8
Ciclev10021480m.g Citrus clementina HOM05D006519 ORTHO05D008306 9.7e-100 367.5 284 66.5
Ah.11g046180 Amaranthus hybridus HOM05D006519 ORTHO05D008306 1.3e-99 367.1 291 63.2
Potri.012G076100 Populus trichocarpa HOM05D006519 ORTHO05D008306 2.2e-99 366.3 283 66.1
FAN13G2537 Fragaria x ananassa HOM05D006519 ORTHO05D008306 4.8e-99 365.2 287 65.2
Nn3g17016 Nelumbo nucifera HOM05D006519 ORTHO05D008306 8.2e-99 364.4 291 63.9
Sabra12G0054300 Salix brachista HOM05D006519 ORTHO05D008306 1.8e-98 363.2 277 66.1
FAN08G1114 Fragaria x ananassa HOM05D006519 ORTHO05D008306 4.1e-98 362.1 285 64.9
Hund02710 Selenicereus undatus HOM05D006519 ORTHO05D008306 1.5e-97 360.1 280 66.8
THA.LOC104809258 Tarenaya hassleriana HOM05D006519 ORTHO05D008306 1.0e-96 357.5 287 63.4
MBI14_g12785_MAGBIO Magnolia biondii HOM05D006519 ORTHO05D008306 1.7e-96 356.7 275 65.8
Psat0s1227g0160 Pisum sativum HOM05D006519 ORTHO05D008306 5.0e-96 355.1 272 65.8
TPR.G37507 Trifolium pratense HOM05D006519 ORTHO05D008306 6.5e-96 354.8 272 65.8
CsaV3_1G008220 Cucumis sativus L. HOM05D006519 ORTHO05D008306 3.2e-95 352.4 279 65.2
Glyma.05G033800 Glycine max HOM05D006519 ORTHO05D008306 4.2e-95 352.1 291 62.9
Lj4g0003537 Lotus japonicus HOM05D006519 ORTHO05D008306 7.2e-95 351.3 275 65.8
Medtr4g106410 Medicago truncatula HOM05D006519 ORTHO05D008306 4.7e-94 348.6 271 64.9
Sed0010209 Sechium edule HOM05D006519 ORTHO05D008306 6.1e-94 348.2 276 65.9
arahy.Tifrunner.gnm1.ann1.IBQC5J Arachis hypogaea HOM05D006519 ORTHO05D008306 3.0e-93 345.9 294 60.9
arahy.Tifrunner.gnm1.ann1.L198ZR Arachis hypogaea HOM05D006519 ORTHO05D008306 3.0e-93 345.9 294 61.9
Carub.0008s1012 Capsella rubella HOM05D006519 ORTHO05D008306 3.0e-93 345.9 276 62.0
AUR62008282 Chenopodium quinoa HOM05D006519 ORTHO05D008306 3.0e-93 345.9 269 63.9
MELO3C002238.2 Cucumis melo HOM05D006519 ORTHO05D008306 3.0e-93 345.9 278 64.4
Lalb_Chr07g0182571 Lupinus albus HOM05D006519 ORTHO05D008306 3.0e-93 345.9 275 63.6
Ca_21889_v3 Cicer arietinum L. HOM05D006519 ORTHO05D008306 8.8e-93 344.4 272 65.1
AT5G50110 Arabidopsis thaliana HOM05D006519 ORTHO05D008306 1.5e-92 343.6 276 62.7
Peaxi162Scf00017g02523 Petunia axillaris HOM05D006519 ORTHO05D008306 1.5e-92 343.6 210 81.0
EL10Ac5g10829 Beta vulgaris HOM05D006519 ORTHO05D008306 2.0e-92 343.2 330 54.5
SGA_v2.0_scaffold467G52031 Striga asiatica HOM05D006519 ORTHO05D008306 5.7e-92 341.7 263 68.1
Sp6g11980 Schrenkiella parvula HOM05D006519 ORTHO05D008306 1.3e-91 340.5 276 61.2
PGR083G2560 Punica granatum HOM05D006519 ORTHO05D008306 1.7e-91 340.1 279 64.5
ClCG01G014120 Citrullus lanatus HOM05D006519 ORTHO05D008306 3.7e-91 339.0 291 61.2
PSO591G0501 Papaver somniferum HOM05D006519 ORTHO05D008306 1.4e-90 337.0 308 59.1
BcaC01g04830 Brassica carinata HOM05D006519 ORTHO05D008306 2.4e-90 336.3 276 62.3
CARHR258520 Cardamine hirsuta HOM05D006519 ORTHO05D008306 2.4e-90 336.3 283 59.7
Aa31sc174G50 Aethionema arabicum HOM05D006519 ORTHO05D008306 3.1e-90 335.9 290 59.7
BolC3t15659H Brassica oleracea HOM05D006519 ORTHO05D008306 5.3e-90 335.1 276 62.0
A03p27660 Brassica napus HOM05D006519 ORTHO05D008306 1.6e-89 333.6 276 62.3
BraA03t11979Z Brassica rapa HOM05D006519 ORTHO05D008306 1.6e-89 333.6 276 62.3
C03p33370 Brassica napus HOM05D006519 ORTHO05D008306 3.5e-89 332.4 276 61.6
BcaB01g02918 Brassica carinata HOM05D006519 ORTHO05D008306 3.8e-88 328.9 279 59.9
COL.COLO4_04635 Corchorus olitorius HOM05D006519 ORTHO05D008306 2.3e-85 319.7 239 71.1
Atru.chr9.2404 Acer truncatum HOM05D006519 ORTHO05D008306 1.2e-84 317.4 283 62.2
ATR0314G030 Amborella trichopoda HOM05D006519 ORTHO05D008306 4.1e-82 308.9 263 60.8
Eucgr.B00339 Eucalyptus grandis HOM05D006519 ORTHO05D008306 4.5e-81 305.4 209 72.2
unitig_62.g23572 Utricularia gibba HOM05D006519 ORTHO05D008306 2.2e-80 303.1 246 62.6
Rhsim12G0161700 Rhododendron simsii HOM05D006519 ORTHO05D008306 6.5e-80 301.6 290 59.7
Thhalv10014373m.g Eutrema salsugineum HOM05D006519 ORTHO05D008306 2.5e-79 299.7 276 56.9
AL8G24100 Arabidopsis lyrata HOM05D006519 ORTHO05D008306 4.0e-77 292.4 209 66.0
Lj9C454G3 Lonicera japonica HOM05D006519 ORTHO05D008306 1.2e-76 290.8 285 55.8
Phvul.003G197000 Phaseolus vulgaris HOM05D006519 ORTHO05D008306 2.2e-75 286.6 197 72.1
AUR62031043 Chenopodium quinoa HOM05D006519 ORTHO05D008306 3.7e-75 285.8 230 63.0
Zm00001eb279990 Zea mays HOM05D006519 ORTHO05D008306 3.7e-75 285.8 230 61.7
Mapoly0003s0145 Marchantia polymorpha HOM05D006519 ORTHO05D008306 7.2e-71 271.6 244 57.4
Pp3c21_11830 Physcomitrium patens HOM05D006519 ORTHO05D008306 6.1e-70 268.5 234 56.8
SMO236G0037 Selaginella moellendorffii HOM05D006519 ORTHO05D008306 7.8e-65 251.5 225 55.6
vmacro16588 Vaccinium macrocarpon HOM05D006519 ORTHO05D008306 8.6e-64 248.1 184 67.9
Hma1.2p1_0002F.1_g002810 Hydrangea macrophylla HOM05D006519 ORTHO05D008306 1.6e-62 243.8 223 60.5
Manes.06G100700 Manihot esculenta HOM05D006519 ORTHO05D008306 1.8e-61 240.4 193 63.2
MD14G1186900 Malus domestica HOM05D006519 ORTHO05D008306 4.9e-59 232.3 173 69.4
MD14G1186100 Malus domestica HOM05D006519 ORTHO05D008306 2.4e-58 229.9 217 57.6
VMungo1215G1861 Vigna mungo HOM05D006519 ORTHO05D008306 4.4e-52 209.1 212 53.8
MD13G1183500 Malus domestica HOM05D006519 ORTHO05D008306 5.8e-52 208.8 167 63.5
Nitab4.5_0001642g0020 Nicotiana tabacum HOM05D006519 ORTHO05D008306 5.8e-52 208.8 133 78.9
Hma1.2p1_0002F.1_g002800 Hydrangea macrophylla HOM05D006519 ORTHO05D008306 9.8e-52 208.0 182 60.4
AagrBONN_evm.TU.Sc2ySwM_228.2029 Anthoceros agrestis HOM05D006519 ORTHO05D008306 2.3e-45 186.8 176 56.2
HPP92_010835 Vanilla planifolia HOM05D006519 ORTHO05D008306 2.6e-44 183.3 172 55.8
Cre09.g394584 Chlamydomonas reinhardtii HOM05D006519 ORTHO05D008306 3.4e-44 183.0 307 37.8
MCO15G300 Micromonas commoda HOM05D006519 ORTHO05D008306 1.6e-41 174.1 239 45.2
Nitab4.5_0001642g0010 Nicotiana tabacum HOM05D006519 ORTHO05D008306 1.2e-38 164.5 135 63.7
Actinidia19081 Actinidia chinensis HOM05D006519 ORTHO05D008306 2.1e-38 163.7 141 58.2
Glyma.17G093302 Glycine max HOM05D006519 ORTHO05D008306 3.1e-37 159.8 102 75.5
Cpa.g.sc35.56 Carica papaya HOM05D006519 ORTHO05D008306 1.4e-34 151.0 116 66.4
SEGI_15669 Sequoiadendron giganteum HOM05D006519 ORTHO05D008306 1.2e-33 147.9 126 56.3
arahy.Tifrunner.gnm1.ann1.KZGX7R Arachis hypogaea HOM05D006519 ORTHO05D008306 3.6e-30 136.3 104 62.5
HanXRQChr11g0328331 Helianthus annuus HOM05D006519 ORTHO05D008306 3.1e-29 133.3 93 64.5
C05p16930 Brassica napus HOM05D006519 ORTHO05D008306 4.0e-29 132.9 97 66.0
Os06g0239000 Oryza sativa ssp. japonica HOM05D006519 ORTHO05D008306 3.2e-26 123.2 100 63.0
CDE06G0478 Ceratophyllum demersum HOM05D006519 ORTHO05D008306 5.4e-26 122.5 88 67.0
arahy.Tifrunner.gnm1.ann1.J4WABN Arachis hypogaea HOM05D006519 ORTHO05D008306 9.3e-26 121.7 97 57.7
arahy.Tifrunner.gnm1.ann1.9L22J7 Arachis hypogaea HOM05D006519 ORTHO05D014446 5.6e-23 112.5 113 52.2
BcaC05g25762 Brassica carinata HOM05D006519 ORTHO05D008306 3.8e-19 99.8 78 62.8
Dinv20697 Davidia involucrata HOM05D006519 ORTHO05D008306 4.9e-19 99.4 145 45.5
PRCOL_00000545 Prasinoderma coloniale HOM05D006519 ORTHO05D008306 5.4e-18 95.9 233 30.9
arahy.Tifrunner.gnm1.ann1.MFZI3Y Arachis hypogaea HOM05D005365 ORTHO05D006910 1.6e-17 94.4 85 51.8
CBR_g30328 Chara braunii HOM05D000019 ORTHO05D000048 1.8e-16 90.9 120 45.0
arahy.Tifrunner.gnm1.ann1.4TMU9W Arachis hypogaea HOM05D005365 ORTHO05D006910 2.8e-14 83.6 68 58.8
arahy.Tifrunner.gnm1.ann1.RNN7F2 Arachis hypogaea HOM05D006519 ORTHO05D008306 2.8e-14 83.6 65 61.5
arahy.Tifrunner.gnm1.ann1.PY279F Arachis hypogaea HOM05D006519 ORTHO05D008306 1.8e-13 80.9 65 64.6
SEGI_16810 Sequoiadendron giganteum HOM05D006519 ORTHO05D008306 4.0e-13 79.7 47 78.7
Potri.015G071001 Populus trichocarpa HOM05D006519 ORTHO05D008306 8.4e-11 72.0 54 68.5


User provided reference genes

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