Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu016286.1 Olea europaea HOM05D000088 ORTHO05D001030 4.5e-46 187.6 96 100.0
Oeu015748.1 Olea europaea HOM05D000088 ORTHO05D001030 8.0e-27 123.6 123 60.2
Oeu049724.1 Olea europaea HOM05D000088 ORTHO05D001030 2.6e-25 118.6 136 55.1
Oeu010327.1 Olea europaea HOM05D000088 ORTHO05D001030 1.6e-22 109.4 60 90.0
Oeu003170.1 Olea europaea HOM05D000088 ORTHO05D001030 1.7e-21 105.9 136 50.7
Migut.H01599 Erythranthe guttata HOM05D000088 ORTHO05D001030 1.1e-20 103.2 137 48.9
MSTRG.14618 Avicennia marina HOM05D000088 ORTHO05D001030 2.1e-19 99.0 137 47.4
Cpa.g.sc75.121 Carica papaya HOM05D000088 ORTHO05D001030 3.4e-17 91.7 148 42.6
Nitab4.5_0008006g0020 Nicotiana tabacum HOM05D000088 ORTHO05D001030 3.4e-17 91.7 139 44.6
Peaxi162Scf00442g00525 Petunia axillaris HOM05D000088 ORTHO05D001030 7.6e-17 90.5 137 45.3
Cc09_g01010 Coffea canephora HOM05D000088 ORTHO05D001030 9.9e-17 90.1 138 45.7
COL.COLO4_31860 Corchorus olitorius HOM05D000088 ORTHO05D001030 2.9e-16 88.6 137 43.8
Eucgr.D01384 Eucalyptus grandis HOM05D000088 ORTHO05D001030 3.7e-16 88.2 137 42.3
Manes.16G001500 Manihot esculenta HOM05D000088 ORTHO05D001030 8.3e-16 87.0 137 42.3
Solyc04g014690.3 Solanum lycopersicum HOM05D000088 ORTHO05D001030 1.4e-15 86.3 140 43.6
Sopen04g006790 Solanum pennellii HOM05D000088 ORTHO05D001030 1.4e-15 86.3 140 43.6
Ciclev10015659m.g Citrus clementina HOM05D000088 ORTHO05D001030 1.9e-15 85.9 137 41.6
Haze_06899 Corylus avellana HOM05D000088 ORTHO05D001030 1.9e-15 85.9 137 43.1
Dinv07386 Davidia involucrata HOM05D000088 ORTHO05D001030 1.9e-15 85.9 138 43.5
CiPaw.09G100500 Carya illinoinensis HOM05D000088 ORTHO05D001030 3.2e-15 85.1 137 42.3
Atru.chr1.2491 Acer truncatum HOM05D000088 ORTHO05D001030 4.1e-15 84.7 137 40.9
Thecc.06G231300 Theobroma cacao HOM05D000088 ORTHO05D001030 4.1e-15 84.7 137 42.3
Cfa000122 Carpinus fangiana HOM05D000088 ORTHO05D001030 5.4e-15 84.3 137 43.1
Duzib160G0922 Durio zibethinus HOM05D000088 ORTHO05D001030 5.4e-15 84.3 138 41.3
RcHm_v2.0_Chr5g0001701 Rosa chinensis HOM05D000088 ORTHO05D001030 7.1e-15 84.0 137 42.3
CSS0047284 Camellia sinensis var. sinensis HOM05D000088 ORTHO05D001030 9.2e-15 83.6 134 42.5
Duzib235G1532 Durio zibethinus HOM05D000088 ORTHO05D001030 2.1e-14 82.4 137 41.6
DCAR_002214 Daucus carota HOM05D000088 ORTHO05D001030 4.6e-14 81.3 138 41.3
Gohir.A06G152500 Gossypium hirsutum HOM05D000088 ORTHO05D001030 4.6e-14 81.3 136 41.9
Prupe.4G012600 Prunus persica HOM05D000088 ORTHO05D001030 4.6e-14 81.3 137 41.6
TAR626G1884 Trochodendron aralioides HOM05D000088 ORTHO05D001030 6.0e-14 80.9 137 40.9
DCAR_004871 Daucus carota HOM05D000088 ORTHO05D001030 7.8e-14 80.5 137 40.1
Duzib192G1011 Durio zibethinus HOM05D000088 ORTHO05D001030 7.8e-14 80.5 137 40.1
Gohir.D06G158800 Gossypium hirsutum HOM05D000088 ORTHO05D001030 1.0e-13 80.1 136 41.2
Gorai.010G185600 Gossypium raimondii HOM05D000088 ORTHO05D001030 1.3e-13 79.7 136 41.2
FvH4_3g01140 Fragaria vesca HOM05D000088 ORTHO05D001030 2.3e-13 79.0 138 42.0
FAN21G2480 Fragaria x ananassa HOM05D000088 ORTHO05D001030 2.3e-13 79.0 138 42.0
Solyc11g012050.1 Solanum lycopersicum HOM05D000088 ORTHO05D001030 3.0e-13 78.6 136 42.6
Potri.011G022800 Populus trichocarpa HOM05D000088 ORTHO05D001030 3.9e-13 78.2 137 38.0
PGR004G0007 Punica granatum HOM05D000088 ORTHO05D001030 3.9e-13 78.2 140 40.0
Sed0013456 Sechium edule HOM05D000088 ORTHO05D001030 3.9e-13 78.2 137 39.4
Sopen11g006840 Solanum pennellii HOM05D000088 ORTHO05D001030 5.1e-13 77.8 136 41.9
ClCG01G021570 Citrullus lanatus HOM05D000088 ORTHO05D001030 6.6e-13 77.4 137 38.7
MELO3C007427.2 Cucumis melo HOM05D000088 ORTHO05D001030 6.6e-13 77.4 137 38.7
vmacro15779 Vaccinium macrocarpon HOM05D000088 ORTHO05D001030 6.6e-13 77.4 140 40.0
CAN.G1186.17 Capsicum annuum HOM05D000088 ORTHO05D001030 8.6e-13 77.0 136 41.9
Rhsim02G0104100 Rhododendron simsii HOM05D000088 ORTHO05D001030 8.6e-13 77.0 140 40.0
CsaV3_6G048590 Cucumis sativus L. HOM05D000088 ORTHO05D001030 1.1e-12 76.6 137 38.0
Gohir.A10G009900 Gossypium hirsutum HOM05D000088 ORTHO05D001030 1.1e-12 76.6 138 39.9
Gohir.D10G009600 Gossypium hirsutum HOM05D000088 ORTHO05D001030 1.1e-12 76.6 138 39.9
Gorai.011G010500 Gossypium raimondii HOM05D000088 ORTHO05D001030 1.1e-12 76.6 138 39.9
SGA_v2.0_scaffold89G27494 Striga asiatica HOM05D000088 ORTHO05D001030 1.1e-12 76.6 138 39.9
Lj1A1238T59 Lonicera japonica HOM05D000088 ORTHO05D001030 1.5e-12 76.3 42 90.5
Glyma.07G264700 Glycine max HOM05D000088 ORTHO05D001030 1.9e-12 75.9 138 41.3
Ca_21052_v3 Cicer arietinum L. HOM05D000088 ORTHO05D001030 2.5e-12 75.5 42 90.5
Medtr4g132860 Medicago truncatula HOM05D000088 ORTHO05D001030 2.5e-12 75.5 42 90.5
Sabra04G0000800 Salix brachista HOM05D000088 ORTHO05D001030 2.5e-12 75.5 137 38.0
Aqoxy1G04155 Aquilegia oxysepala HOM05D000127 ORTHO05D001030 3.3e-12 75.1 42 90.5
TWI38G1928 Tripterygium wilfordii HOM05D000088 ORTHO05D001030 3.3e-12 75.1 137 38.7
Phvul.003G082800 Phaseolus vulgaris HOM05D000088 ORTHO05D001030 4.3e-12 74.7 138 40.6
Psat4g003560 Pisum sativum HOM05D000088 ORTHO05D001030 4.3e-12 74.7 42 90.5
TPR.G37119 Trifolium pratense HOM05D000088 ORTHO05D001030 4.3e-12 74.7 42 90.5
ECA100G0003 Erigeron canadensis HOM05D000088 ORTHO05D001030 5.6e-12 74.3 42 85.7
HanXRQChr15g0470831 Helianthus annuus HOM05D000088 ORTHO05D001030 5.6e-12 74.3 42 85.7
Actinidia26873 Actinidia chinensis HOM05D000088 ORTHO05D001030 7.3e-12 73.9 137 38.0
Glyma.17G009300 Glycine max HOM05D000088 ORTHO05D001030 7.3e-12 73.9 138 40.6
Lsat_1_v5_gn_7_13361 Lactuca sativa HOM05D000088 ORTHO05D001030 7.3e-12 73.9 42 85.7
Nitab4.5_0000143g0460 Nicotiana tabacum HOM05D000088 ORTHO05D001030 7.3e-12 73.9 136 40.4
Oeu003026.1 Olea europaea HOM05D000088 ORTHO05D001030 7.3e-12 73.9 40 90.0
Potri.004G001900 Populus trichocarpa HOM05D000088 ORTHO05D001030 7.3e-12 73.9 137 38.0
Hund23412 Selenicereus undatus HOM05D000088 ORTHO05D001030 7.3e-12 73.9 42 88.1
PGSC0003DMG400023610 Solanum tuberosum HOM05D000088 ORTHO05D001030 7.3e-12 73.9 42 88.1
CSS0020426 Camellia sinensis var. sinensis HOM05D000088 ORTHO05D001030 9.6e-12 73.6 143 37.8
CANSAT56G1021 Cannabis sativa HOM05D000088 ORTHO05D001030 9.6e-12 73.6 42 88.1
MD05G1356400 Malus domestica HOM05D000088 ORTHO05D001030 9.6e-12 73.6 138 39.9
Oeu002756.2 Olea europaea HOM05D000088 ORTHO05D001030 9.6e-12 73.6 42 85.7
EL10Ac5g12878 Beta vulgaris HOM05D000088 ORTHO05D001030 1.2e-11 73.2 42 88.1
FAN25G1268 Fragaria x ananassa HOM05D000088 ORTHO05D001030 1.6e-11 72.8 42 88.1
Lj4g0018257 Lotus japonicus HOM05D000088 ORTHO05D001030 1.6e-11 72.8 139 39.6
Aa31LG2G110 Aethionema arabicum HOM05D000088 ORTHO05D001030 2.1e-11 72.4 42 85.7
AL2G13490 Arabidopsis lyrata HOM05D000088 ORTHO05D001030 2.1e-11 72.4 42 85.7
AT1G62400 Arabidopsis thaliana HOM05D000088 ORTHO05D001030 2.1e-11 72.4 42 85.7
BcaB07g31324 Brassica carinata HOM05D000088 ORTHO05D001030 2.1e-11 72.4 42 85.7
BcaC04g22768 Brassica carinata HOM05D000088 ORTHO05D001030 2.1e-11 72.4 42 85.7
A09p16290 Brassica napus HOM05D000088 ORTHO05D001030 2.1e-11 72.4 42 85.7
BolC9t54456H Brassica oleracea HOM05D000088 ORTHO05D001030 2.1e-11 72.4 42 85.7
BraA09t36954Z Brassica rapa HOM05D000088 ORTHO05D001030 2.1e-11 72.4 42 85.7
BraA09t37267Z Brassica rapa HOM05D000088 ORTHO05D001030 2.1e-11 72.4 42 85.7
Carub.0002s0258 Capsella rubella HOM05D000088 ORTHO05D001030 2.1e-11 72.4 42 85.7
CiPaw.10G076500 Carya illinoinensis HOM05D000088 ORTHO05D001030 2.1e-11 72.4 137 38.7
Thhalv10023512m.g Eutrema salsugineum HOM05D000088 ORTHO05D001030 2.1e-11 72.4 42 85.7
Sp2g02210 Schrenkiella parvula HOM05D000088 ORTHO05D001030 2.1e-11 72.4 42 85.7
VMungo1215G2399 Vigna mungo HOM05D000088 ORTHO05D001030 2.1e-11 72.4 138 40.6
arahy.Tifrunner.gnm1.ann1.KD656J Arachis hypogaea HOM05D000088 ORTHO05D001030 2.8e-11 72.0 42 85.7
arahy.Tifrunner.gnm1.ann1.MA69BJ Arachis hypogaea HOM05D000088 ORTHO05D001030 2.8e-11 72.0 42 85.7
Nitab4.5_0001198g0210 Nicotiana tabacum HOM05D000088 ORTHO05D001030 2.8e-11 72.0 42 85.7
Peaxi162Scf00558g00116 Petunia axillaris HOM05D000088 ORTHO05D001030 3.6e-11 71.6 137 39.4
Ah.12g052250 Amaranthus hybridus HOM05D000088 ORTHO05D001030 4.7e-11 71.2 42 85.7
BcaC04g22396 Brassica carinata HOM05D000088 ORTHO05D001030 4.7e-11 71.2 42 83.3
C09p19800 Brassica napus HOM05D000088 ORTHO05D001030 4.7e-11 71.2 42 83.3
BolC9t54882H Brassica oleracea HOM05D000088 ORTHO05D001030 4.7e-11 71.2 42 83.3
Lj6g0011802 Lotus japonicus HOM05D000088 ORTHO05D001030 8.1e-11 70.5 138 41.3
BcaC02g10467 Brassica carinata HOM05D000088 ORTHO05D001030 1.4e-10 69.7 42 83.3
C04p28550 Brassica napus HOM05D000088 ORTHO05D001030 1.4e-10 69.7 42 83.3
BolC4t24399H Brassica oleracea HOM05D000088 ORTHO05D001030 1.4e-10 69.7 42 83.3
CARHR049530 Cardamine hirsuta HOM05D000088 ORTHO05D001030 1.4e-10 69.7 147 37.4
MD10G1329500 Malus domestica HOM05D000088 ORTHO05D001030 1.4e-10 69.7 42 83.3
PGSC0003DMG401013267 Solanum tuberosum HOM05D000088 ORTHO05D001030 1.4e-10 69.7 42 83.3
A09p13100 Brassica napus HOM05D000088 ORTHO05D001030 1.8e-10 69.3 42 83.3
C09p15510 Brassica napus HOM05D000088 ORTHO05D001030 1.8e-10 69.3 42 83.3
TWI63G1142 Tripterygium wilfordii HOM05D000088 ORTHO05D001030 1.8e-10 69.3 42 83.3
Nn1g03352 Nelumbo nucifera HOM05D000088 ORTHO05D001030 2.4e-10 68.9 134 38.1
Sed0027726 Sechium edule HOM05D000088 ORTHO05D001030 2.4e-10 68.9 42 85.7
Sc05g0009550 Simmondsia chinensis HOM05D000088 ORTHO05D001030 4.0e-10 68.2 42 83.3
Nitab4.5_0000574g0270 Nicotiana tabacum HOM05D000088 ORTHO05D001030 8.9e-10 67.0 127 38.6
QL10p003463 Quercus lobata HOM05D000088 ORTHO05D001030 1.2e-09 66.6 137 36.5
AUR62019801 Chenopodium quinoa HOM05D000088 ORTHO05D001030 1.5e-09 66.2 42 78.6
QL03p008454 Quercus lobata HOM05D000088 ORTHO05D001030 1.5e-09 66.2 145 35.9
AUR62010804 Chenopodium quinoa HOM05D000088 ORTHO05D001030 2.6e-09 65.5 42 78.6
MBI19_g29449_MAGBIO Magnolia biondii HOM05D000088 ORTHO05D001030 2.6e-09 65.5 42 81.0
PSO210G2529 Papaver somniferum HOM05D000088 ORTHO05D001030 3.4e-09 65.1 42 78.6
PSO832G1843 Papaver somniferum HOM05D000088 ORTHO05D001030 3.4e-09 65.1 42 78.6
HPP92_004754 Vanilla planifolia HOM05D000088 ORTHO05D001030 4.4e-09 64.7 42 76.2
Zm00001eb387440 Zea mays HOM05D000088 ORTHO05D001030 4.4e-09 64.7 42 76.2
Actinidia02327 Actinidia chinensis HOM05D000088 ORTHO05D001030 5.8e-09 64.3 136 35.3
Glyma.09G009100 Glycine max HOM05D000088 ORTHO05D001030 5.8e-09 64.3 140 36.4
Phvul.006G144200 Phaseolus vulgaris HOM05D000088 ORTHO05D001030 5.8e-09 64.3 139 36.0
HPP92_004749 Vanilla planifolia HOM05D000088 ORTHO05D001030 5.8e-09 64.3 42 76.2
Glyma.15G113500 Glycine max HOM05D000088 ORTHO05D001030 7.6e-09 63.9 140 36.4
Os06g0636600 Oryza sativa ssp. japonica HOM05D000088 ORTHO05D001030 7.6e-09 63.9 42 76.2
Zm00001eb275520 Zea mays HOM05D000088 ORTHO05D001030 1.3e-08 63.2 42 76.2
Lalb_Chr18g0056881 Lupinus albus HOM05D000088 ORTHO05D001030 1.7e-08 62.8 42 76.2
ATR1128G072 Amborella trichopoda HOM05D000088 ORTHO05D001030 2.9e-08 62.0 42 71.4
Lalb_Chr15g0087891 Lupinus albus HOM05D000088 ORTHO05D001030 3.8e-08 61.6 42 73.8
VMungo0540G1560 Vigna mungo HOM05D000088 ORTHO05D001030 6.4e-08 60.8 42 71.4
CAN.G60.1 Capsicum annuum HOM05D000088 ORTHO05D001030 8.4e-08 60.5 139 35.3
CDE04G0303 Ceratophyllum demersum HOM05D000088 ORTHO05D001030 3.2e-07 58.5 42 59.5
CDE07G0367 Ceratophyllum demersum HOM05D000088 ORTHO05D001030 3.2e-07 58.5 42 59.5
THA.LOC104809254 Tarenaya hassleriana HOM05D000088 ORTHO05D001030 3.5e-06 55.1 42 69.0
Dinv13956 Davidia involucrata HOM05D000088 ORTHO05D001030 6.0e-06 54.3 103 33.0


User provided reference genes

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