Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu016254.2 Olea europaea HOM05D005204 ORTHO05D006037 0.0e+00 1409.0 714 100.0
Oeu031982.1 Olea europaea HOM05D005204 ORTHO05D006037 0.0e+00 1090.9 736 79.3
Migut.N00079 Erythranthe guttata HOM05D005204 ORTHO05D006037 2.2e-209 733.0 726 58.3
SalBow5G0318 Salvia bowleyana HOM05D005204 ORTHO05D006037 6.5e-206 721.5 737 57.9
CSS0048761 Camellia sinensis var. sinensis HOM05D005204 ORTHO05D006037 6.7e-203 711.4 737 55.9
Rhsim02G0007000 Rhododendron simsii HOM05D005204 ORTHO05D006037 4.8e-201 705.3 727 57.1
MSTRG.24802 Avicennia marina HOM05D005204 ORTHO05D006037 7.0e-200 701.4 731 56.6
SGA_v2.0_scaffold428G51532 Striga asiatica HOM05D005204 ORTHO05D006037 3.5e-199 699.1 739 57.0
QL06p010355 Quercus lobata HOM05D005204 ORTHO05D006037 1.2e-196 690.6 737 55.2
Cc03_g01540 Coffea canephora HOM05D005204 ORTHO05D006037 1.0e-195 687.6 741 57.0
Hma1.2p1_0078F.1_g040360 Hydrangea macrophylla HOM05D005204 ORTHO05D006037 2.2e-193 679.9 716 56.0
TAR633G1027 Trochodendron aralioides HOM05D005204 ORTHO05D006037 7.0e-192 674.9 723 56.0
Cfa015426 Carpinus fangiana HOM05D005204 ORTHO05D006037 6.5e-190 668.3 743 52.4
CiPaw.02G079900 Carya illinoinensis HOM05D005204 ORTHO05D006037 1.1e-189 667.5 724 54.1
Thecc.04G288800 Theobroma cacao HOM05D005204 ORTHO05D006037 3.6e-188 662.5 747 53.5
CAN.G484.49 Capsicum annuum HOM05D005204 ORTHO05D006037 8.0e-188 661.4 718 54.9
Actinidia14280 Actinidia chinensis HOM05D005204 ORTHO05D006037 1.4e-187 660.6 673 56.3
vmacro15212 Vaccinium macrocarpon HOM05D005204 ORTHO05D006037 1.4e-187 660.6 732 54.4
Peaxi162Scf00646g00324 Petunia axillaris HOM05D005204 ORTHO05D006037 5.7e-186 655.2 730 54.5
PGSC0003DMG400004628 Solanum tuberosum HOM05D005204 ORTHO05D006037 1.6e-183 647.1 730 53.2
Sopen12g034090 Solanum pennellii HOM05D005204 ORTHO05D006037 1.0e-182 644.4 722 53.5
Solyc12g099420.2 Solanum lycopersicum HOM05D005204 ORTHO05D006037 2.9e-182 642.9 721 54.0
MD16G1164600 Malus domestica HOM05D005204 ORTHO05D006037 1.5e-181 640.6 719 52.7
Nitab4.5_0003767g0030 Nicotiana tabacum HOM05D005204 ORTHO05D006037 1.5e-181 640.6 732 53.1
Duzib052G0651 Durio zibethinus HOM05D005204 ORTHO05D006037 2.5e-181 639.8 728 52.2
Ciclev10004466m.g Citrus clementina HOM05D005204 ORTHO05D006037 4.2e-181 639.0 719 53.7
Peaxi162Scf00065g01219 Petunia axillaris HOM05D005204 ORTHO05D006037 5.5e-181 638.6 723 53.1
COL.COLO4_13824 Corchorus olitorius HOM05D005204 ORTHO05D006037 6.1e-180 635.2 738 51.5
GSVIVG01035108001 Vitis vinifera HOM05D005204 ORTHO05D006037 1.4e-179 634.0 753 51.9
Nn1g01973 Nelumbo nucifera HOM05D005204 ORTHO05D006037 4.0e-179 632.5 713 53.3
Prupe.1G123900 Prunus persica HOM05D005204 ORTHO05D006037 4.4e-178 629.0 722 51.5
Nitab4.5_0000695g0090 Nicotiana tabacum HOM05D005204 ORTHO05D006037 2.2e-177 626.7 734 52.3
Manes.03G200100 Manihot esculenta HOM05D005204 ORTHO05D006037 8.3e-177 624.8 724 51.0
Atru.chr4.2898 Acer truncatum HOM05D005204 ORTHO05D006037 1.4e-176 624.0 714 52.1
TWI73G0558 Tripterygium wilfordii HOM05D005204 ORTHO05D006037 2.4e-176 623.2 745 51.7
Nitab4.5_0000570g0320 Nicotiana tabacum HOM05D005204 ORTHO05D006037 4.7e-172 609.0 720 51.9
Lj6A680G91 Lonicera japonica HOM05D005204 ORTHO05D006037 1.0e-171 607.8 604 59.3
Haze_01167 Corylus avellana HOM05D005204 ORTHO05D006037 1.8e-171 607.1 891 44.2
Potri.008G219100 Populus trichocarpa HOM05D005204 ORTHO05D006037 1.8e-171 607.1 702 51.4
MBI18_g25094_MAGBIO Magnolia biondii HOM05D005204 ORTHO05D006037 3.0e-171 606.3 733 50.6
ECA246G1739 Erigeron canadensis HOM05D005204 ORTHO05D006037 1.2e-170 604.4 732 50.0
Gohir.A02G050800 Gossypium hirsutum HOM05D005204 ORTHO05D006037 1.5e-170 604.0 736 51.5
RcHm_v2.0_Chr4g0423341 Rosa chinensis HOM05D005204 ORTHO05D006037 3.2e-168 596.3 721 50.8
PGR004G0276 Punica granatum HOM05D005204 ORTHO05D006037 1.2e-167 594.3 732 49.6
Gohir.D02G055700 Gossypium hirsutum HOM05D005204 ORTHO05D006037 1.6e-167 594.0 729 51.4
Cpa.g.sc50.164 Carica papaya HOM05D005204 ORTHO05D006037 7.8e-167 591.7 742 49.5
Nitab4.5_0003484g0040 Nicotiana tabacum HOM05D005204 ORTHO05D006037 2.3e-166 590.1 722 50.7
FvH4_4g18640 Fragaria vesca HOM05D005204 ORTHO05D006037 3.9e-166 589.3 728 50.5
HanXRQChr06g0173751 Helianthus annuus HOM05D005204 ORTHO05D006037 3.9e-166 589.3 743 49.3
Sabra08G0151500 Salix brachista HOM05D005204 ORTHO05D006037 6.6e-166 588.6 704 50.0
FAN12G0364 Fragaria x ananassa HOM05D005204 ORTHO05D006037 2.5e-165 586.6 728 50.7
Potri.010G010480 Populus trichocarpa HOM05D005204 ORTHO05D006037 7.3e-165 585.1 703 50.2
Gorai.005G061700 Gossypium raimondii HOM05D005204 ORTHO05D006037 3.6e-164 582.8 729 50.9
MD13G1164900 Malus domestica HOM05D005204 ORTHO05D006037 3.6e-164 582.8 721 50.1
FAN07G2681 Fragaria x ananassa HOM05D005204 ORTHO05D006037 1.8e-163 580.5 728 50.3
arahy.Tifrunner.gnm1.ann1.J2HRGN Arachis hypogaea HOM05D005204 ORTHO05D006037 2.3e-163 580.1 731 49.7
FAN12G3005 Fragaria x ananassa HOM05D005204 ORTHO05D006037 2.3e-163 580.1 676 52.5
Sc13g0003240 Simmondsia chinensis HOM05D005204 ORTHO05D006037 4.0e-163 579.3 703 52.5
Dinv29726 Davidia involucrata HOM05D005204 ORTHO05D006037 2.0e-162 577.0 591 56.3
arahy.Tifrunner.gnm1.ann1.02VXE5 Arachis hypogaea HOM05D005204 ORTHO05D006037 7.5e-162 575.1 731 49.5
FAN17G1530 Fragaria x ananassa HOM05D005204 ORTHO05D006037 2.2e-161 573.5 735 49.8
Lsat_1_v5_gn_3_21680 Lactuca sativa HOM05D005204 ORTHO05D006037 8.3e-161 571.6 727 49.7
Glyma.15G150700 Glycine max HOM05D005204 ORTHO05D006037 3.0e-158 563.1 727 49.4
Aqoxy5G00784 Aquilegia oxysepala HOM05D005204 ORTHO05D006037 5.0e-158 562.4 672 50.6
EL10Ac3g06651 Beta vulgaris HOM05D005204 ORTHO05D006037 1.5e-157 560.8 747 48.1
Ca_01912_v3 Cicer arietinum L. HOM05D005204 ORTHO05D006037 2.8e-156 556.6 736 48.4
TPR.G28067 Trifolium pratense HOM05D005204 ORTHO05D006037 4.0e-155 552.7 670 50.0
Glyma.09G042300 Glycine max HOM05D005204 ORTHO05D006037 8.9e-155 551.6 727 48.4
Lj6g0026338 Lotus japonicus HOM05D005204 ORTHO05D006037 2.6e-154 550.1 734 48.6
Sabra10G0006400 Salix brachista HOM05D005204 ORTHO05D006037 1.3e-153 547.7 705 48.2
Sed0015514 Sechium edule HOM05D005204 ORTHO05D006037 2.9e-153 546.6 717 48.7
VMungo1309G0885 Vigna mungo HOM05D005204 ORTHO05D006037 3.7e-153 546.2 744 47.0
Eucgr.H03961 Eucalyptus grandis HOM05D005204 ORTHO05D006037 3.5e-151 539.7 728 48.1
Psat1g155920 Pisum sativum HOM05D005204 ORTHO05D006037 1.3e-150 537.7 744 45.7
AUR62018070 Chenopodium quinoa HOM05D005204 ORTHO05D006037 2.5e-149 533.5 728 47.8
Hund20528 Selenicereus undatus HOM05D005204 ORTHO05D006037 1.2e-148 531.2 718 48.3
Medtr2g436080 Medicago truncatula HOM05D005204 ORTHO05D006037 3.6e-148 529.6 668 49.0
Lalb_Chr18g0054391 Lupinus albus HOM05D005204 ORTHO05D006037 4.7e-148 529.3 684 47.8
Phvul.009G250500 Phaseolus vulgaris HOM05D005204 ORTHO05D006037 4.0e-147 526.2 672 49.1
PSO832G0069 Papaver somniferum HOM05D005204 ORTHO05D006037 6.8e-147 525.4 754 46.0
Lalb_Chr20g0117381 Lupinus albus HOM05D005204 ORTHO05D006037 1.5e-146 524.2 664 47.0
Manes.03G198500 Manihot esculenta HOM05D005204 ORTHO05D006037 4.4e-146 522.7 647 48.7
THA.LOC104820287 Tarenaya hassleriana HOM05D005204 ORTHO05D006037 2.4e-144 516.9 721 46.7
DCAR_030505 Daucus carota HOM05D005204 ORTHO05D006037 3.2e-144 516.5 677 46.5
BcaB06g25769 Brassica carinata HOM05D005204 ORTHO05D006037 1.0e-142 511.5 702 47.3
MELO3C010685.2 Cucumis melo HOM05D005204 ORTHO05D006037 6.6e-142 508.8 642 48.3
AT3G16730 Arabidopsis thaliana HOM05D005204 ORTHO05D006037 8.6e-142 508.4 710 47.3
AUR62015273 Chenopodium quinoa HOM05D005204 ORTHO05D006037 1.5e-141 507.7 719 46.0
PSO210G5425 Papaver somniferum HOM05D005204 ORTHO05D006037 3.3e-141 506.5 750 45.3
AL3G29660 Arabidopsis lyrata HOM05D005204 ORTHO05D006037 7.3e-141 505.4 715 46.7
ClCG08G017750 Citrullus lanatus HOM05D005204 ORTHO05D006037 1.6e-140 504.2 665 47.8
BcaC05g28856 Brassica carinata HOM05D005204 ORTHO05D006037 2.1e-140 503.8 700 47.1
Sp3g15000 Schrenkiella parvula HOM05D005204 ORTHO05D006037 1.8e-139 500.7 709 47.0
C05p49580 Brassica napus HOM05D005204 ORTHO05D006037 5.2e-139 499.2 701 47.1
Carub.0003s1646 Capsella rubella HOM05D005204 ORTHO05D006037 5.2e-139 499.2 714 47.5
BolC5t33716H Brassica oleracea HOM05D005204 ORTHO05D006037 1.2e-138 498.0 701 47.1
A05p32870 Brassica napus HOM05D005204 ORTHO05D006037 2.9e-137 493.4 700 46.0
BraA05t22110Z Brassica rapa HOM05D005204 ORTHO05D006037 1.1e-136 491.5 702 46.2
Thhalv10020220m.g Eutrema salsugineum HOM05D005204 ORTHO05D006037 2.4e-136 490.3 713 45.9
A01p37560 Brassica napus HOM05D005204 ORTHO05D006037 5.4e-136 489.2 710 45.5
BraA01t03817Z Brassica rapa HOM05D005204 ORTHO05D006037 7.1e-136 488.8 715 45.7
Ah.04g153660 Amaranthus hybridus HOM05D005204 ORTHO05D006037 1.9e-133 480.7 722 45.8
Aa31LG8G3820 Aethionema arabicum HOM05D005204 ORTHO05D006037 9.6e-133 478.4 714 45.0
C01p47610 Brassica napus HOM05D005204 ORTHO05D006037 1.3e-132 478.0 713 45.0
BolC1t04731H Brassica oleracea HOM05D005204 ORTHO05D006037 2.1e-132 477.2 710 45.6
BcaC09g48627 Brassica carinata HOM05D005204 ORTHO05D006037 3.6e-132 476.5 713 45.2
ATR0693G386 Amborella trichopoda HOM05D005204 ORTHO05D006037 6.2e-132 475.7 708 45.2
CsaV3_7G000690 Cucumis sativus L. HOM05D005204 ORTHO05D006037 1.7e-129 467.6 672 44.9
DCAR_023300 Daucus carota HOM05D005204 ORTHO05D006037 4.2e-128 463.0 683 44.5
HPP92_012404 Vanilla planifolia HOM05D005204 ORTHO05D006037 9.9e-122 441.8 704 43.9
CsaV3_2G024870 Cucumis sativus L. HOM05D005204 ORTHO05D006037 2.9e-121 440.3 659 44.5
Zm00001eb322750 Zea mays HOM05D005204 ORTHO05D006037 4.6e-119 433.0 717 43.1
SHI00244 Sapria himalayana HOM05D005204 ORTHO05D006037 1.0e-118 431.8 782 41.0
CDE05G2961 Ceratophyllum demersum HOM05D005204 ORTHO05D006037 1.8e-115 421.0 717 40.3
Os07g0517300 Oryza sativa ssp. japonica HOM05D005204 ORTHO05D006037 2.5e-109 400.6 706 41.4
Nn3g19294 Nelumbo nucifera HOM05D005204 ORTHO05D006037 1.0e-102 378.6 666 39.8
TAR362G0889 Trochodendron aralioides HOM05D005204 ORTHO05D006037 9.7e-101 372.1 541 45.7
CARHR091990 Cardamine hirsuta HOM05D005204 ORTHO05D006037 6.1e-87 326.2 464 45.9
SEGI_08509 Sequoiadendron giganteum HOM05D005204 ORTHO05D006037 1.8e-86 324.7 735 35.0
Zm00001eb106060 Zea mays HOM05D005204 ORTHO05D006037 2.9e-81 307.4 590 39.7
unitig_749.g14080 Utricularia gibba HOM05D005204 ORTHO05D006037 3.0e-78 297.4 703 33.6
Dinv44351 Davidia involucrata HOM05D005204 ORTHO05D006037 6.5e-65 253.1 727 31.9
SMO367G0335 Selaginella moellendorffii HOM05D005204 ORTHO05D006037 9.4e-64 249.2 705 31.8
Mapoly0137s0008 Marchantia polymorpha HOM05D005204 ORTHO05D006037 2.0e-61 241.5 741 31.2
TAR624G0487 Trochodendron aralioides HOM05D005204 ORTHO05D006037 2.1e-55 221.5 316 44.6
Actinidia13388 Actinidia chinensis HOM05D005204 ORTHO05D006037 3.3e-48 197.6 215 55.3
CARHR091980 Cardamine hirsuta HOM05D005204 ORTHO05D006037 3.4e-45 187.6 227 52.0
CBR_g38039 Chara braunii HOM05D005204 ORTHO05D006037 1.7e-44 185.3 786 29.3
ATR0693G078 Amborella trichopoda HOM05D005204 ORTHO05D006037 4.3e-40 170.6 222 47.7
Dinv29725 Davidia involucrata HOM05D005204 ORTHO05D006037 3.7e-36 157.5 98 81.6
TAR624G0737 Trochodendron aralioides HOM05D005204 ORTHO05D006037 1.4e-35 155.6 217 47.5
AagrBONN_evm.TU.Sc2ySwM_340.303 Anthoceros agrestis HOM05D005204 ORTHO05D006037 2.7e-34 151.4 530 28.1
PGR004G0772 Punica granatum HOM05D005204 ORTHO05D006037 9.9e-29 132.9 176 49.4
DCAR_031703 Daucus carota HOM05D005204 ORTHO05D006037 1.6e-26 125.6 105 61.0
Manes.17G118669 Manihot esculenta HOM05D005204 ORTHO05D006037 4.7e-23 114.0 160 46.2
PRCOL_00000998 Prasinoderma coloniale HOM05D005204 ORTHO05D006037 2.0e-21 108.6 692 25.6
Cre09.g408900 Chlamydomonas reinhardtii HOM05D005204 ORTHO05D006037 2.6e-13 81.6 99 43.4
Zm00001eb139240 Zea mays HOM05D001287 ORTHO05D006037 3.3e-08 64.7 59 52.5
ATR0296G001 Amborella trichopoda HOM05D005204 ORTHO05D006037 9.6e-08 63.2 63 60.3
Zm00001eb009560 Zea mays HOM05D005204 ORTHO05D006037 1.8e-06 58.9 116 35.3
Zm00001eb046380 Zea mays HOM05D005204 ORTHO05D006037 1.8e-06 58.9 116 35.3
Zm00001eb219840 Zea mays HOM05D005204 ORTHO05D006037 1.8e-06 58.9 116 35.3
Atru.chr3.336 Acer truncatum HOM05D004186 ORTHO05D006037 5.3e-06 57.4 64 50.0


User provided reference genes

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