Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu016195.1 Olea europaea HOM05D003579 ORTHO05D004266 2.2e-79 298.9 152 100.0
Oeu023525.2 Olea europaea HOM05D003579 ORTHO05D004266 1.0e-44 183.7 117 83.8
Cc04_g09210 Coffea canephora HOM05D003579 ORTHO05D004266 4.5e-40 168.3 117 76.1
Lj5A164G66 Lonicera japonica HOM05D003579 ORTHO05D004266 7.7e-40 167.5 117 75.2
Rhsim08G0128400 Rhododendron simsii HOM05D003579 ORTHO05D004266 3.8e-39 165.2 117 75.2
vmacro17766 Vaccinium macrocarpon HOM05D003579 ORTHO05D004266 6.5e-39 164.5 117 75.2
SalBow1G2020 Salvia bowleyana HOM05D003579 ORTHO05D004266 8.5e-39 164.1 117 75.2
DCAR_011388 Daucus carota HOM05D003579 ORTHO05D004266 3.2e-38 162.2 117 74.4
Actinidia34663 Actinidia chinensis HOM05D003579 ORTHO05D004266 2.7e-37 159.1 117 71.8
Dinv07799 Davidia involucrata HOM05D003579 ORTHO05D004266 2.7e-37 159.1 117 70.9
PGSC0003DMG400026957 Solanum tuberosum HOM05D003579 ORTHO05D004266 3.6e-37 158.7 117 70.9
MSTRG.9359 Avicennia marina HOM05D003579 ORTHO05D004266 6.1e-37 157.9 117 72.6
MD14G1240900 Malus domestica HOM05D003579 ORTHO05D004266 6.1e-37 157.9 117 69.2
Solyc06g072380.3 Solanum lycopersicum HOM05D003579 ORTHO05D004266 8.0e-37 157.5 117 70.9
Sopen06g028750 Solanum pennellii HOM05D003579 ORTHO05D004266 8.0e-37 157.5 117 70.9
CAN.G65.87 Capsicum annuum HOM05D003579 ORTHO05D004266 2.3e-36 156.0 117 70.9
FAN04G1919 Fragaria x ananassa HOM05D003579 ORTHO05D004266 3.0e-36 155.6 117 70.9
FAN08G1300 Fragaria x ananassa HOM05D003579 ORTHO05D004266 3.0e-36 155.6 117 70.9
SGA_v2.0_scaffold74G24677 Striga asiatica HOM05D003579 ORTHO05D004266 4.0e-36 155.2 116 73.3
FvH4_5g17820 Fragaria vesca HOM05D003579 ORTHO05D004266 6.7e-36 154.5 117 70.1
RcHm_v2.0_Chr7g0177761 Rosa chinensis HOM05D003579 ORTHO05D004266 8.8e-36 154.1 117 69.2
CDE06G0014 Ceratophyllum demersum HOM05D003579 ORTHO05D004266 1.2e-35 153.7 117 70.9
Migut.D01207 Erythranthe guttata HOM05D003579 ORTHO05D004266 1.2e-35 153.7 117 73.5
PSO017G1464 Papaver somniferum HOM05D003579 ORTHO05D004266 1.2e-35 153.7 117 70.1
CiPaw.16G098300 Carya illinoinensis HOM05D003579 ORTHO05D004266 2.0e-35 152.9 117 69.2
MD06G1234200 Malus domestica HOM05D003579 ORTHO05D004266 2.0e-35 152.9 117 67.5
AUR62038599 Chenopodium quinoa HOM05D003579 ORTHO05D004266 3.3e-35 152.1 117 67.5
COL.COLO4_24456 Corchorus olitorius HOM05D003579 ORTHO05D004266 3.3e-35 152.1 116 68.1
Nitab4.5_0000033g0340 Nicotiana tabacum HOM05D003579 ORTHO05D004266 3.3e-35 152.1 124 68.5
PSO478G0806 Papaver somniferum HOM05D003579 ORTHO05D004266 3.3e-35 152.1 117 69.2
Nitab4.5_0003127g0010 Nicotiana tabacum HOM05D003579 ORTHO05D004266 4.4e-35 151.8 124 69.4
unitig_736.g22827 Utricularia gibba HOM05D003579 ORTHO05D004266 4.4e-35 151.8 117 70.9
Manes.06G001700 Manihot esculenta HOM05D003579 ORTHO05D004266 7.5e-35 151.0 117 68.4
Potri.012G041100 Populus trichocarpa HOM05D003579 ORTHO05D004266 1.3e-34 150.2 117 68.4
QL10p037085 Quercus lobata HOM05D003579 ORTHO05D004266 1.3e-34 150.2 117 68.4
Hund22317 Selenicereus undatus HOM05D003579 ORTHO05D004266 1.3e-34 150.2 117 69.2
Gohir.D02G120000 Gossypium hirsutum HOM05D003579 ORTHO05D004266 1.7e-34 149.8 117 70.1
Peaxi162Scf00643g00664 Petunia axillaris HOM05D003579 ORTHO05D004266 1.7e-34 149.8 133 63.2
Prupe.5G238700 Prunus persica HOM05D003579 ORTHO05D004266 1.7e-34 149.8 117 67.5
HanXRQChr03g0087091 Helianthus annuus HOM05D003579 ORTHO05D004266 2.2e-34 149.4 117 65.8
Gohir.A03G091600 Gossypium hirsutum HOM05D003579 ORTHO05D004266 2.8e-34 149.1 116 69.8
Nn3g19567 Nelumbo nucifera HOM05D003579 ORTHO05D004266 3.7e-34 148.7 117 67.5
GSVIVG01012941001 Vitis vinifera HOM05D003579 ORTHO05D004266 3.7e-34 148.7 116 67.2
Gorai.005G134000 Gossypium raimondii HOM05D003579 ORTHO05D004266 4.8e-34 148.3 116 69.8
AUR62034013 Chenopodium quinoa HOM05D003579 ORTHO05D004266 8.2e-34 147.5 117 65.8
Duzib205G0446 Durio zibethinus HOM05D003579 ORTHO05D004266 8.2e-34 147.5 116 68.1
Nn4g24545 Nelumbo nucifera HOM05D003579 ORTHO05D004266 8.2e-34 147.5 117 69.2
ECA233G2231 Erigeron canadensis HOM05D003579 ORTHO05D004266 1.1e-33 147.1 117 65.0
CiPaw.15G149000 Carya illinoinensis HOM05D003579 ORTHO05D004266 1.4e-33 146.7 117 67.5
Gohir.D07G065501 Gossypium hirsutum HOM05D003579 ORTHO05D004266 1.4e-33 146.7 116 68.1
Sabra12G0028200 Salix brachista HOM05D003579 ORTHO05D004266 1.4e-33 146.7 117 65.8
Gohir.A07G060800 Gossypium hirsutum HOM05D003579 ORTHO05D004266 3.1e-33 145.6 116 67.2
Thecc.03G066100 Theobroma cacao HOM05D003579 ORTHO05D004266 3.1e-33 145.6 116 68.1
arahy.Tifrunner.gnm1.ann1.SGC6ES Arachis hypogaea HOM05D003579 ORTHO05D004266 4.1e-33 145.2 116 68.1
Atru.chr9.1578_Atru.chr9.1579 Acer truncatum HOM05D003579 ORTHO05D004266 5.3e-33 144.8 117 66.7
Potri.015G032500 Populus trichocarpa HOM05D003579 ORTHO05D004266 5.3e-33 144.8 117 65.8
ATR0598G272 Amborella trichopoda HOM05D003579 ORTHO05D004266 7.0e-33 144.4 117 63.2
Ciclev10019405m.g Citrus clementina HOM05D003579 ORTHO05D004266 7.0e-33 144.4 117 65.0
Duzib084G0133 Durio zibethinus HOM05D003579 ORTHO05D004266 7.0e-33 144.4 116 68.1
PGR044G2375 Punica granatum HOM05D003579 ORTHO05D004266 7.0e-33 144.4 117 65.0
TWI60G0145 Tripterygium wilfordii HOM05D003579 ORTHO05D004266 9.1e-33 144.1 117 66.7
CANSAT56G2203 Cannabis sativa HOM05D003579 ORTHO05D004266 1.2e-32 143.7 117 66.7
Eucgr.H00571 Eucalyptus grandis HOM05D003579 ORTHO05D004266 1.2e-32 143.7 117 68.4
Lsat_1_v5_gn_8_1741 Lactuca sativa HOM05D003579 ORTHO05D004266 1.6e-32 143.3 119 65.5
TWI15G0294 Tripterygium wilfordii HOM05D003579 ORTHO05D004266 1.6e-32 143.3 117 65.0
Aqoxy3G00001 Aquilegia oxysepala HOM05D003579 ORTHO05D004266 2.7e-32 142.5 117 64.1
Glyma.09G170600 Glycine max HOM05D003579 ORTHO05D004266 3.5e-32 142.1 116 67.2
Sp3g15890 Schrenkiella parvula HOM05D003579 ORTHO05D004266 3.5e-32 142.1 116 62.9
CARHR093110 Cardamine hirsuta HOM05D003579 ORTHO05D004266 4.5e-32 141.7 116 62.9
PGR083G0897 Punica granatum HOM05D003579 ORTHO05D004266 4.5e-32 141.7 117 68.4
A08p04710 Brassica napus HOM05D003579 ORTHO05D004266 5.9e-32 141.4 117 62.4
VMungo0464G0093 Vigna mungo HOM05D003579 ORTHO05D004266 5.9e-32 141.4 116 66.4
Thhalv10020350m.g Eutrema salsugineum HOM05D003579 ORTHO05D004266 7.7e-32 141.0 116 62.1
EL10Ac8g19495 Beta vulgaris HOM05D003579 ORTHO05D004266 1.0e-31 140.6 117 66.7
Lalb_Chr24g0398301 Lupinus albus HOM05D003579 ORTHO05D004266 1.0e-31 140.6 116 66.4
AL3G30930 Arabidopsis lyrata HOM05D003579 ORTHO05D004266 1.3e-31 140.2 116 62.9
BcaC07g37135 Brassica carinata HOM05D003579 ORTHO05D004266 1.3e-31 140.2 117 62.4
Carub.0001s3756 Capsella rubella HOM05D003579 ORTHO05D004266 2.2e-31 139.4 117 61.5
A05p32070 Brassica napus HOM05D003579 ORTHO05D004266 2.9e-31 139.0 116 62.1
C05p48570 Brassica napus HOM05D003579 ORTHO05D004266 2.9e-31 139.0 116 62.1
BolC5t33593H Brassica oleracea HOM05D003579 ORTHO05D004266 2.9e-31 139.0 116 62.1
Carub.0003s1749 Capsella rubella HOM05D003579 ORTHO05D004266 2.9e-31 139.0 116 62.9
CARHR038050 Cardamine hirsuta HOM05D003579 ORTHO05D004266 3.8e-31 138.7 117 63.2
FAN13G2047 Fragaria x ananassa HOM05D003579 ORTHO05D004266 5.0e-31 138.3 138 59.4
AT3G17770 Arabidopsis thaliana HOM05D003579 ORTHO05D004266 8.5e-31 137.5 116 62.1
BcaNung05880 Brassica carinata HOM05D003579 ORTHO05D004266 8.5e-31 137.5 116 61.2
C08p05080 Brassica napus HOM05D003579 ORTHO05D004266 8.5e-31 137.5 117 61.5
Sc10g0008960 Simmondsia chinensis HOM05D003579 ORTHO05D004266 8.5e-31 137.5 117 63.2
HPP92_013127 Vanilla planifolia HOM05D003579 ORTHO05D004266 8.5e-31 137.5 117 64.1
HPP92_013151 Vanilla planifolia HOM05D003579 ORTHO05D004266 8.5e-31 137.5 117 64.1
AL1G55060 Arabidopsis lyrata HOM05D003579 ORTHO05D004266 1.1e-30 137.1 117 62.4
BraA08t32501Z Brassica rapa HOM05D003579 ORTHO05D004266 1.9e-30 136.3 117 60.7
CsaV3_1G004890 Cucumis sativus L. HOM05D003579 ORTHO05D004266 1.9e-30 136.3 117 64.1
Aa31LG8G4650 Aethionema arabicum HOM05D003579 ORTHO05D004266 2.5e-30 136.0 117 60.7
Os03g0719300 Oryza sativa ssp. japonica HOM05D003579 ORTHO05D004266 2.5e-30 136.0 117 62.4
MELO3C001926.2 Cucumis melo HOM05D003579 ORTHO05D004266 3.2e-30 135.6 117 64.1
Thhalv10011337m.g Eutrema salsugineum HOM05D003579 ORTHO05D004266 3.2e-30 135.6 117 61.5
SMO230G0064 Selaginella moellendorffii HOM05D003579 ORTHO05D004266 4.2e-30 135.2 117 59.8
arahy.Tifrunner.gnm1.ann1.7TIF1A Arachis hypogaea HOM05D003579 ORTHO05D004266 7.2e-30 134.4 116 66.4
arahy.Tifrunner.gnm1.ann1.N38075 Arachis hypogaea HOM05D003579 ORTHO05D004266 7.2e-30 134.4 116 66.4
Glyma.07G107100 Glycine max HOM05D003579 ORTHO05D004266 9.4e-30 134.0 116 65.5
Phvul.004G146300 Phaseolus vulgaris HOM05D003579 ORTHO05D004266 9.4e-30 134.0 116 62.9
Sabra15G0026700 Salix brachista HOM05D003579 ORTHO05D004266 1.2e-29 133.7 140 55.0
Sed0003427 Sechium edule HOM05D003579 ORTHO05D004266 1.6e-29 133.3 117 64.1
SabraUnG0005900 Salix brachista HOM05D003579 ORTHO05D004266 2.1e-29 132.9 140 54.3
TPR.G31707 Trifolium pratense HOM05D003579 ORTHO05D004266 6.1e-29 131.3 114 63.2
BolC8t47313H Brassica oleracea HOM05D003579 ORTHO05D004266 1.0e-28 130.6 122 59.0
CANSAT56G3429 Cannabis sativa HOM05D003579 ORTHO05D004266 1.8e-28 129.8 117 62.4
SEGI_32565 Sequoiadendron giganteum HOM05D003579 ORTHO05D004266 1.8e-28 129.8 106 63.2
MBI13_g21695_MAGBIO Magnolia biondii HOM05D003579 ORTHO05D004266 3.0e-28 129.0 144 54.2
Psat1g124800 Pisum sativum HOM05D003579 ORTHO05D004266 6.8e-28 127.9 111 63.1
Eucgr.K02291 Eucalyptus grandis HOM05D003579 ORTHO05D004266 8.8e-28 127.5 113 65.5
AT1G48430 Arabidopsis thaliana HOM05D003579 ORTHO05D004266 1.2e-27 127.1 111 60.4
Medtr6g073003 Medicago truncatula HOM05D003579 ORTHO05D004266 2.0e-27 126.3 114 62.3
Ca_20292_v3 Cicer arietinum L. HOM05D003579 ORTHO05D004266 3.4e-27 125.6 115 60.0
Lj2g0001753 Lotus japonicus HOM05D003579 ORTHO05D004266 9.8e-27 124.0 114 59.6
Sp1g35380 Schrenkiella parvula HOM05D003579 ORTHO05D004266 9.8e-27 124.0 117 59.0
Hma1.2p1_0471F.1_g159320 Hydrangea macrophylla HOM05D003579 ORTHO05D004266 3.7e-26 122.1 120 59.2
Pp3c10_19150 Physcomitrium patens HOM05D003579 ORTHO05D004266 6.3e-26 121.3 112 59.8
BraA05t22036Z Brassica rapa HOM05D003579 ORTHO05D004266 1.1e-25 120.6 143 50.3
Pp3c4_4070 Physcomitrium patens HOM05D003579 ORTHO05D004266 1.1e-25 120.6 117 59.0
BolC5t33211H Brassica oleracea HOM05D003579 ORTHO05D004266 1.4e-25 120.2 117 58.1
SGA_v2.0_scaffold40G15653 Striga asiatica HOM05D003579 ORTHO05D004266 3.5e-24 115.5 105 63.8
Lalb_Chr14g0370481 Lupinus albus HOM05D003579 ORTHO05D004266 4.5e-24 115.2 116 57.8
AagrBONN_evm.TU.Sc2ySwM_228.5556 Anthoceros agrestis HOM05D003579 ORTHO05D004266 5.9e-24 114.8 117 55.6
Psat0s1042g0080 Pisum sativum HOM05D003579 ORTHO05D004266 1.3e-23 113.6 111 56.8
Lj2g0026679 Lotus japonicus HOM05D003579 ORTHO05D004266 2.2e-23 112.8 114 57.0
BraA05t21815Z Brassica rapa HOM05D003579 ORTHO05D004266 1.1e-22 110.5 110 56.4
Mapoly0125s0006 Marchantia polymorpha HOM05D003579 ORTHO05D004266 3.2e-22 109.0 116 51.7
BraA05t21823Z Brassica rapa HOM05D003579 ORTHO05D004266 5.5e-22 108.2 110 55.5
BcaB04g17425 Brassica carinata HOM05D003579 ORTHO05D004266 6.1e-21 104.8 117 51.3
C05p44830 Brassica napus HOM05D003579 ORTHO05D004266 6.1e-21 104.8 109 55.0
CSS0000253 Camellia sinensis var. sinensis HOM05D003579 ORTHO05D004266 1.4e-20 103.6 68 80.9
FAN18G3127 Fragaria x ananassa HOM05D003579 ORTHO05D004266 1.5e-19 100.1 73 71.2
TAR028G0001 Trochodendron aralioides HOM05D003579 ORTHO05D004266 3.4e-19 99.0 73 69.9
Gorai.001G069000 Gossypium raimondii HOM05D003579 ORTHO05D004266 4.4e-19 98.6 72 70.8
CBR_g4012 Chara braunii HOM05D003579 ORTHO05D004266 7.0e-17 91.3 113 51.3
Sopen09g023790 Solanum pennellii HOM05D003579 ORTHO05D004266 5.6e-14 81.6 62 67.7
Sopen11g021990 Solanum pennellii HOM05D003579 ORTHO05D004266 5.6e-14 81.6 62 67.7
Haze_18948 Corylus avellana HOM05D003579 ORTHO05D004266 4.7e-13 78.6 117 43.6
MCO02G001 Micromonas commoda HOM05D003579 ORTHO05D004266 1.4e-12 77.0 116 41.4
Cre13.g607450 Chlamydomonas reinhardtii HOM05D003579 ORTHO05D004266 1.7e-10 70.1 118 38.1
PRCOL_00004885 Prasinoderma coloniale HOM05D003579 ORTHO05D004266 7.0e-09 64.7 123 37.4


User provided reference genes

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