Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu016162.1 Olea europaea HOM05D005660 ORTHO05D006954 8.9e-102 373.6 192 100.0
Oeu027136.1 Olea europaea HOM05D005660 ORTHO05D006954 1.0e-73 280.4 164 89.6
Cc04_g07620 Coffea canephora HOM05D005660 ORTHO05D006954 1.5e-72 276.6 191 71.7
PGSC0003DMG400004073 Solanum tuberosum HOM05D005660 ORTHO05D006954 2.1e-71 272.7 198 71.2
Peaxi162Scf00015g00624 Petunia axillaris HOM05D005660 ORTHO05D006954 1.4e-70 270.0 194 71.1
Lj5C141T17 Lonicera japonica HOM05D005660 ORTHO05D006954 6.9e-70 267.7 193 69.9
SalBow2G0395 Salvia bowleyana HOM05D005660 ORTHO05D006954 2.6e-69 265.8 187 74.3
CAN.G438.109 Capsicum annuum HOM05D005660 ORTHO05D006954 7.6e-69 264.2 204 67.2
Nitab4.5_0003716g0100 Nicotiana tabacum HOM05D005660 ORTHO05D006954 7.6e-69 264.2 193 69.9
Migut.K00381 Erythranthe guttata HOM05D005660 ORTHO05D006954 3.8e-68 261.9 188 72.3
MSTRG.9561 Avicennia marina HOM05D005660 ORTHO05D006954 4.9e-68 261.5 188 73.4
Solyc03g119840.3 Solanum lycopersicum HOM05D005660 ORTHO05D006954 8.4e-68 260.8 199 67.3
Lsat_1_v5_gn_1_15860 Lactuca sativa HOM05D005660 ORTHO05D006954 2.5e-67 259.2 198 67.7
Dinv36893 Davidia involucrata HOM05D005660 ORTHO05D006954 3.2e-67 258.8 191 68.6
Atru.chr9.733 Acer truncatum HOM05D005660 ORTHO05D006954 1.6e-66 256.5 198 68.2
ECA247G3454 Erigeron canadensis HOM05D005660 ORTHO05D006954 1.6e-66 256.5 199 68.8
Nitab4.5_0010134g0010 Nicotiana tabacum HOM05D005660 ORTHO05D006954 7.9e-66 254.2 193 68.4
HanXRQChr02g0042751 Helianthus annuus HOM05D005660 ORTHO05D006954 1.8e-65 253.1 198 67.2
QL10p023157 Quercus lobata HOM05D005660 ORTHO05D006954 1.8e-65 253.1 198 66.2
CSS0007003 Camellia sinensis var. sinensis HOM05D005660 ORTHO05D006954 3.9e-65 251.9 196 66.8
Sopen06g026530 Solanum pennellii HOM05D005660 ORTHO05D006954 3.9e-65 251.9 194 68.6
Nitab4.5_0001432g0090 Nicotiana tabacum HOM05D005660 ORTHO05D006954 7.4e-64 247.7 202 66.3
Sed0025711 Sechium edule HOM05D005660 ORTHO05D006954 1.6e-63 246.5 199 63.3
Ciclev10022237m.g Citrus clementina HOM05D005660 ORTHO05D006954 6.3e-63 244.6 198 60.6
COL.COLO4_38430 Corchorus olitorius HOM05D005660 ORTHO05D006954 6.3e-63 244.6 197 64.5
Gohir.D12G265300 Gossypium hirsutum HOM05D005660 ORTHO05D006954 1.1e-62 243.8 199 63.8
CANSAT80G1116 Cannabis sativa HOM05D005660 ORTHO05D006954 1.4e-62 243.4 202 63.9
Thecc.03G027100 Theobroma cacao HOM05D005660 ORTHO05D006954 2.4e-62 242.7 195 65.1
Prupe.5G216100 Prunus persica HOM05D005660 ORTHO05D006954 3.1e-62 242.3 203 62.6
CiPaw.16G083200 Carya illinoinensis HOM05D005660 ORTHO05D006954 5.3e-62 241.5 202 63.4
Duzib068G0469 Durio zibethinus HOM05D005660 ORTHO05D006954 5.3e-62 241.5 202 62.9
Actinidia39803 Actinidia chinensis HOM05D005660 ORTHO05D006954 6.9e-62 241.1 196 64.8
Lalb_Chr07g0178541 Lupinus albus HOM05D005660 ORTHO05D006954 6.9e-62 241.1 195 63.6
Gohir.A12G265100 Gossypium hirsutum HOM05D005660 ORTHO05D006954 9.0e-62 240.7 199 63.8
HanXRQChr04g0105941 Helianthus annuus HOM05D005660 ORTHO05D006954 9.0e-62 240.7 193 64.8
PGR083G1435 Punica granatum HOM05D005660 ORTHO05D006954 1.2e-61 240.4 206 62.1
FvH4_5g12810 Fragaria vesca HOM05D005660 ORTHO05D006954 2.0e-61 239.6 203 63.5
FAN18G2100 Fragaria x ananassa HOM05D005660 ORTHO05D006954 2.6e-61 239.2 203 63.1
MD06G1209900 Malus domestica HOM05D005660 ORTHO05D006954 3.4e-61 238.8 209 60.3
RcHm_v2.0_Chr7g0184421 Rosa chinensis HOM05D005660 ORTHO05D006954 3.4e-61 238.8 202 62.4
FAN08G1036 Fragaria x ananassa HOM05D005660 ORTHO05D006954 5.9e-61 238.0 203 63.1
FAN18G0270 Fragaria x ananassa HOM05D005660 ORTHO05D006954 5.9e-61 238.0 203 62.6
Glyma.05G014100 Glycine max HOM05D005660 ORTHO05D006954 5.9e-61 238.0 193 63.2
VMungo1309G1625 Vigna mungo HOM05D005660 ORTHO05D006954 1.7e-60 236.5 197 63.5
Manes.01G021600 Manihot esculenta HOM05D005660 ORTHO05D006954 2.9e-60 235.7 198 63.1
arahy.Tifrunner.gnm1.ann1.18T8HP Arachis hypogaea HOM05D005660 ORTHO05D006954 5.0e-60 235.0 199 62.8
arahy.Tifrunner.gnm1.ann1.IPQJ9D Arachis hypogaea HOM05D005660 ORTHO05D006954 5.0e-60 235.0 199 58.8
CsaV3_1G006460 Cucumis sativus L. HOM05D005660 ORTHO05D006954 6.5e-60 234.6 200 61.5
Glyma.06G209600 Glycine max HOM05D005660 ORTHO05D006954 6.5e-60 234.6 197 61.9
Glyma.17G122400 Glycine max HOM05D005660 ORTHO05D006954 6.5e-60 234.6 193 62.7
Lj1g0000047 Lotus japonicus HOM05D005660 ORTHO05D006954 6.5e-60 234.6 195 61.0
Potri.012G059100 Populus trichocarpa HOM05D005660 ORTHO05D006954 1.4e-59 233.4 202 62.4
MELO3C002072.2 Cucumis melo HOM05D005660 ORTHO05D006954 4.2e-59 231.9 201 60.2
Glyma.04G145600 Glycine max HOM05D005660 ORTHO05D006954 4.2e-59 231.9 198 62.1
Medtr2g055760 Medicago truncatula HOM05D005660 ORTHO05D006954 4.2e-59 231.9 199 61.3
Manes.05G117900 Manihot esculenta HOM05D005660 ORTHO05D006954 2.1e-58 229.6 197 61.4
Nitab4.5_0000410g0170 Nicotiana tabacum HOM05D005660 ORTHO05D006954 2.1e-58 229.6 168 71.4
MD14G1220800 Malus domestica HOM05D005660 ORTHO05D006954 3.6e-58 228.8 209 58.4
Hund09993 Selenicereus undatus HOM05D005660 ORTHO05D006954 4.6e-58 228.4 210 61.4
Lj4g0015648 Lotus japonicus HOM05D005660 ORTHO05D006954 6.1e-58 228.0 195 60.5
arahy.Tifrunner.gnm1.ann1.YK8N2P Arachis hypogaea HOM05D005660 ORTHO05D006954 1.0e-57 227.3 199 57.8
Eucgr.B00688 Eucalyptus grandis HOM05D005660 ORTHO05D006954 2.3e-57 226.1 198 58.1
Aqoxy3G03878 Aquilegia oxysepala HOM05D005660 ORTHO05D006954 3.9e-57 225.3 191 61.8
TWI81G0064 Tripterygium wilfordii HOM05D005660 ORTHO05D006954 3.9e-57 225.3 199 58.8
Gorai.008G285000 Gossypium raimondii HOM05D005660 ORTHO05D006954 6.7e-57 224.6 232 54.7
EL10Ac5g11240 Beta vulgaris HOM05D005660 ORTHO05D006954 2.5e-56 222.6 204 55.9
Nn3g17686 Nelumbo nucifera HOM05D005660 ORTHO05D006954 5.7e-56 221.5 187 61.5
Peaxi162Scf00013g00938 Petunia axillaris HOM05D005660 ORTHO05D006954 4.1e-54 215.3 189 59.8
Phvul.003G178300 Phaseolus vulgaris HOM05D005660 ORTHO05D006954 4.1e-54 215.3 210 57.1
Psat1g025680 Pisum sativum HOM05D005660 ORTHO05D006954 9.1e-54 214.2 199 58.3
Cfa019836 Carpinus fangiana HOM05D005660 ORTHO05D006954 1.2e-53 213.8 168 66.1
CiPaw.15G125200 Carya illinoinensis HOM05D005660 ORTHO05D006954 1.0e-52 210.7 214 57.0
Sed0025679 Sechium edule HOM05D005660 ORTHO05D006954 1.0e-52 210.7 201 57.2
TAR629G1816 Trochodendron aralioides HOM05D005660 ORTHO05D006954 2.2e-52 209.5 184 62.0
Ah.11g047200 Amaranthus hybridus HOM05D005660 ORTHO05D006954 2.9e-52 209.1 215 53.5
DCAR_011337 Daucus carota HOM05D005660 ORTHO05D006954 3.8e-52 208.8 166 69.3
Cpa.g.c34045 Carica papaya HOM05D005660 ORTHO05D006954 8.5e-52 207.6 167 65.9
AL1G55790 Arabidopsis lyrata HOM05D005660 ORTHO05D006954 3.2e-51 205.7 204 54.4
Carub.0001s3813 Capsella rubella HOM05D005660 ORTHO05D006954 3.2e-51 205.7 204 55.9
AT1G48960 Arabidopsis thaliana HOM05D005660 ORTHO05D006954 5.5e-51 204.9 204 54.9
PSO063G2916 Papaver somniferum HOM05D005660 ORTHO05D006954 7.2e-51 204.5 203 57.1
Actinidia31034 Actinidia chinensis HOM05D005660 ORTHO05D009563 1.2e-50 203.8 171 63.7
Thhalv10011768m.g Eutrema salsugineum HOM05D005660 ORTHO05D006954 1.2e-50 203.8 202 54.0
Sp1g35870 Schrenkiella parvula HOM05D005660 ORTHO05D006954 1.2e-50 203.8 201 53.7
CARHR038970 Cardamine hirsuta HOM05D005660 ORTHO05D006954 1.6e-50 203.4 205 54.6
BcaB04g17376 Brassica carinata HOM05D005660 ORTHO05D006954 2.1e-50 203.0 200 54.0
Haze_18589 Corylus avellana HOM05D005660 ORTHO05D006954 2.7e-50 202.6 176 61.4
Haze_18590 Corylus avellana HOM05D005660 ORTHO05D006954 6.1e-50 201.4 176 60.8
BraA06t23613Z Brassica rapa HOM05D005660 ORTHO05D006954 7.9e-50 201.1 202 52.5
BcaNung05017 Brassica carinata HOM05D005660 ORTHO05D006954 1.4e-49 200.3 202 52.5
C06p03690 Brassica napus HOM05D005660 ORTHO05D006954 1.4e-49 200.3 202 52.5
BolC6t35508H Brassica oleracea HOM05D005660 ORTHO05D006954 1.4e-49 200.3 202 52.5
BcaC08g43100 Brassica carinata HOM05D005660 ORTHO05D006954 1.8e-49 199.9 202 52.5
BcaC07g37091 Brassica carinata HOM05D005660 ORTHO05D006954 3.0e-49 199.1 201 52.7
C08p04550 Brassica napus HOM05D005660 ORTHO05D006954 3.0e-49 199.1 201 52.7
BolC8t47259H Brassica oleracea HOM05D005660 ORTHO05D006954 3.0e-49 199.1 201 52.7
A06p04080 Brassica napus HOM05D005660 ORTHO05D006954 3.9e-49 198.7 202 52.0
A08p04280 Brassica napus HOM05D005660 ORTHO05D006954 3.9e-49 198.7 202 52.5
Aa31LG10G4970 Aethionema arabicum HOM05D005660 ORTHO05D006954 1.1e-48 197.2 192 53.6
arahy.Tifrunner.gnm1.ann1.K4DBIV Arachis hypogaea HOM05D005660 ORTHO05D006954 5.7e-48 194.9 172 62.8
vmacro17684 Vaccinium macrocarpon HOM05D005660 ORTHO05D006954 9.7e-48 194.1 162 62.3
PSO782G0127 Papaver somniferum HOM05D005660 ORTHO05D006954 2.2e-47 193.0 203 54.7
Ca_02656_v3 Cicer arietinum L. HOM05D005660 ORTHO05D006954 1.1e-46 190.7 172 61.0
Sc12g0006810 Simmondsia chinensis HOM05D005660 ORTHO05D006954 1.8e-46 189.9 180 54.4
VMungo1215G2351 Vigna mungo HOM05D005660 ORTHO05D006954 1.2e-45 187.2 275 43.6
AUR62032180 Chenopodium quinoa HOM05D005660 ORTHO05D006954 2.0e-45 186.4 180 56.1
BraA08t32455Z Brassica rapa HOM05D005660 ORTHO05D006954 1.3e-44 183.7 202 50.0
TPR.G27758 Trifolium pratense HOM05D005660 ORTHO05D006954 4.2e-43 178.7 176 55.7
GSVIVG01008223001 Vitis vinifera HOM05D005660 ORTHO05D006954 7.2e-43 177.9 189 53.4
TAR622G0544 Trochodendron aralioides HOM05D005660 ORTHO05D006954 1.2e-42 177.2 191 51.3
THA.LOC104820410 Tarenaya hassleriana HOM05D005660 ORTHO05D006954 4.7e-42 175.3 231 45.5
Duzib084G1344 Durio zibethinus HOM05D005660 ORTHO05D006954 8.8e-41 171.0 192 49.5
CAN.G587.76 Capsicum annuum HOM05D005660 ORTHO05D006954 2.0e-40 169.9 115 73.9
Rhsim08G0138400 Rhododendron simsii HOM05D005660 ORTHO05D006954 1.2e-37 160.6 123 65.9
Cpa.g.sc13.65 Carica papaya HOM05D005660 ORTHO05D006954 2.0e-37 159.8 115 69.6
Nn4g23692 Nelumbo nucifera HOM05D005660 ORTHO05D006954 4.5e-37 158.7 185 50.3
Lalb_Chr13g0302411 Lupinus albus HOM05D005660 ORTHO05D006954 1.0e-36 157.5 115 67.0
Sabra12G0040900 Salix brachista HOM05D005660 ORTHO05D006954 3.8e-36 155.6 117 70.1
AUR62036940 Chenopodium quinoa HOM05D005660 ORTHO05D006954 6.5e-36 154.8 120 66.7
MBI16_g23748_MAGBIO Magnolia biondii HOM05D005660 ORTHO05D006954 7.2e-35 151.4 160 52.5
ClCG04G011310 Citrullus lanatus HOM05D005660 ORTHO05D006954 1.2e-32 144.1 128 57.8
HPP92_011590 Vanilla planifolia HOM05D005660 ORTHO05D006954 1.2e-32 144.1 189 45.0
ATR0598G023 Amborella trichopoda HOM05D005660 ORTHO05D006954 1.7e-31 140.2 152 53.3
Phvul.009G201000 Phaseolus vulgaris HOM05D005660 ORTHO05D006954 5.9e-29 131.7 125 56.8
Sopen03g038700 Solanum pennellii HOM05D005660 ORTHO05D006954 3.2e-27 125.9 100 66.0
SEGI_40774 Sequoiadendron giganteum HOM05D005660 ORTHO05D006954 5.5e-27 125.2 149 49.7
Zm00001eb126330 Zea mays HOM05D005660 ORTHO05D006954 8.0e-26 121.3 116 53.4
AagrBONN_evm.TU.Sc2ySwM_362.1267 Anthoceros agrestis HOM05D005660 ORTHO05D006954 1.8e-22 110.2 157 41.4
PGSC0003DMG400005618 Solanum tuberosum HOM05D005660 ORTHO05D006954 1.2e-16 90.9 76 64.5
CDE07G0562 Ceratophyllum demersum HOM05D005660 ORTHO05D006954 2.8e-15 86.3 122 41.8
FAN13G2173 Fragaria x ananassa HOM05D005660 ORTHO05D006954 3.7e-15 85.9 94 59.6
Solyc06g069270.1 Solanum lycopersicum HOM05D005660 ORTHO05D006954 3.7e-15 85.9 57 73.7
Lalb_Chr13g0302401 Lupinus albus HOM05D005660 ORTHO05D006954 6.3e-15 85.1 83 53.0
Sabra12G0040800 Salix brachista HOM05D005660 ORTHO05D006954 1.7e-12 77.0 91 48.4
Medtr5g047050 Medicago truncatula HOM05D001012 ORTHO05D002597 5.2e-09 65.5 149 32.9
TPR.G38561 Trifolium pratense HOM05D001012 ORTHO05D002597 5.2e-09 65.5 148 32.4
Lj2g0027117 Lotus japonicus HOM05D001012 ORTHO05D002597 6.8e-09 65.1 149 33.6
Ca_05056_v3 Cicer arietinum L. HOM05D001012 ORTHO05D002597 1.2e-08 64.3 117 35.0
Lalb_Chr10g0099111 Lupinus albus HOM05D001012 ORTHO05D002597 1.2e-08 64.3 119 32.8
Lalb_Chr17g0341401 Lupinus albus HOM05D001012 ORTHO05D002597 4.4e-08 62.4 117 34.2
Psat2g093600 Pisum sativum HOM05D001012 ORTHO05D002597 4.4e-08 62.4 146 31.5
arahy.Tifrunner.gnm1.ann1.QD4C18 Arachis hypogaea HOM05D001012 ORTHO05D002597 5.8e-08 62.0 118 37.3
arahy.Tifrunner.gnm1.ann1.WE17ZA Arachis hypogaea HOM05D001012 ORTHO05D002597 5.8e-08 62.0 118 37.3
RcHm_v2.0_Chr5g0042351 Rosa chinensis HOM05D005660 ORTHO05D006954 9.8e-08 61.2 44 65.9
Manes.01G025500 Manihot esculenta HOM05D001012 ORTHO05D002597 1.3e-07 60.8 147 32.7
RcHm_v2.0_Chr4g0434591 Rosa chinensis HOM05D005660 ORTHO05D006954 1.3e-07 60.8 43 67.4
Glyma.02G121800 Glycine max HOM05D001012 ORTHO05D002597 1.7e-07 60.5 119 34.5
PSO782G1087 Papaver somniferum HOM05D001012 ORTHO05D002597 2.2e-07 60.1 116 31.9
Phvul.003G038900 Phaseolus vulgaris HOM05D001012 ORTHO05D002597 3.7e-07 59.3 119 35.3
Cpa.g.sc1.163 Carica papaya HOM05D001012 ORTHO05D002597 1.1e-06 57.8 148 30.4
PGR119G0423 Punica granatum HOM05D001012 ORTHO05D002597 1.1e-06 57.8 117 33.3
FvH4_4g29580 Fragaria vesca HOM05D001012 ORTHO05D002597 1.4e-06 57.4 119 35.3
FAN12G4325 Fragaria x ananassa HOM05D001012 ORTHO05D002597 1.4e-06 57.4 119 35.3
Sabra10G0108300 Salix brachista HOM05D001012 ORTHO05D002597 1.9e-06 57.0 146 30.8
SEGI_13166 Sequoiadendron giganteum HOM05D001012 ORTHO05D002597 1.9e-06 57.0 129 31.8
VMungo1215G3431 Vigna mungo HOM05D001012 ORTHO05D002597 1.9e-06 57.0 119 34.5
Ah.03g138680 Amaranthus hybridus HOM05D001012 ORTHO05D002597 5.4e-06 55.5 119 32.8
Aqoxy3G03718 Aquilegia oxysepala HOM05D001012 ORTHO05D002597 5.4e-06 55.5 116 31.9
Potri.010G140200 Populus trichocarpa HOM05D001012 ORTHO05D002597 7.0e-06 55.1 146 30.1
Sed0023361 Sechium edule HOM05D001012 ORTHO05D002597 7.0e-06 55.1 116 36.2
SMO145G0122 Selaginella moellendorffii HOM05D001012 ORTHO05D002597 7.0e-06 55.1 117 32.5
TWI81G0138 Tripterygium wilfordii HOM05D001012 ORTHO05D002597 7.0e-06 55.1 117 29.9
A07p35460 Brassica napus HOM05D001012 ORTHO05D002597 9.2e-06 54.7 124 33.9
BraA07t31137Z Brassica rapa HOM05D001012 ORTHO05D002597 9.2e-06 54.7 124 33.9
FAN22G1093 Fragaria x ananassa HOM05D001012 ORTHO05D002597 9.2e-06 54.7 117 34.2
Rhsim09G0124600 Rhododendron simsii HOM05D001012 ORTHO05D002597 9.2e-06 54.7 116 30.2
Hund02547 Selenicereus undatus HOM05D001012 ORTHO05D002597 9.2e-06 54.7 119 31.9


User provided reference genes

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