Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu016044.4 Olea europaea HOM05D005804 ORTHO05D006849 2.1e-120 435.6 210 100.0
Oeu058729.2 Olea europaea HOM05D005804 ORTHO05D006849 5.0e-90 334.7 239 74.5
CSS0001147 Camellia sinensis var. sinensis HOM05D005804 ORTHO05D006849 4.2e-36 155.6 153 50.3
vmacro16719 Vaccinium macrocarpon HOM05D005804 ORTHO05D006849 4.2e-36 155.6 188 47.9
SGA_v2.0_scaffold164G38120 Striga asiatica HOM05D005804 ORTHO05D006849 3.5e-35 152.5 153 52.3
Migut.O00254 Erythranthe guttata HOM05D005804 ORTHO05D006849 7.9e-35 151.4 147 55.1
Lj9A479T55 Lonicera japonica HOM05D005804 ORTHO05D006849 1.3e-34 150.6 203 44.3
SalBow8G2935 Salvia bowleyana HOM05D005804 ORTHO05D006849 2.3e-34 149.8 191 48.7
CAN.G1631.5 Capsicum annuum HOM05D005606 ORTHO05D006446 5.1e-34 148.7 232 40.5
Nitab4.5_0010950g0010 Nicotiana tabacum HOM05D005804 ORTHO05D006849 5.1e-34 148.7 184 46.7
Cc04_g08810 Coffea canephora HOM05D005804 ORTHO05D006849 1.9e-33 146.7 145 55.9
Actinidia08874 Actinidia chinensis HOM05D005804 ORTHO05D006849 1.6e-32 143.7 124 54.8
Rhsim12G0175100 Rhododendron simsii HOM05D005804 ORTHO05D006849 2.1e-32 143.3 171 45.6
Hma1.2p1_0014F.1_g009390 Hydrangea macrophylla HOM05D005804 ORTHO05D006849 6.2e-32 141.7 123 55.3
Peaxi162Scf00171g00421 Petunia axillaris HOM05D005804 ORTHO05D006849 1.8e-31 140.2 181 46.4
Lsat_1_v5_gn_1_33221 Lactuca sativa HOM05D005804 ORTHO05D006849 4.1e-31 139.0 164 47.6
Dinv11177 Davidia involucrata HOM05D005804 ORTHO05D006849 1.2e-30 137.5 129 55.0
Sopen03g029080 Solanum pennellii HOM05D005804 ORTHO05D006849 2.0e-30 136.7 184 41.8
PGSC0003DMG400025629 Solanum tuberosum HOM05D005804 ORTHO05D006849 2.0e-30 136.7 184 41.8
TAR371G0929 Trochodendron aralioides HOM05D005804 ORTHO05D006849 2.6e-30 136.3 154 48.7
HanXRQChr13g0408711 Helianthus annuus HOM05D005804 ORTHO05D006849 1.3e-29 134.0 160 45.6
Solyc03g098330.2 Solanum lycopersicum HOM05D005804 ORTHO05D006849 3.8e-29 132.5 184 40.8
GSVIVG01008547001 Vitis vinifera HOM05D005804 ORTHO05D006849 6.5e-29 131.7 130 50.8
Dinv23150 Davidia involucrata HOM05D005804 ORTHO05D006849 1.9e-28 130.2 186 45.7
Atru.chr6.1796 Acer truncatum HOM05D005804 ORTHO05D006849 7.1e-28 128.3 127 54.3
Atru.chr12.1219 Acer truncatum HOM05D005804 ORTHO05D006849 3.5e-27 125.9 127 52.8
TAR629G0711 Trochodendron aralioides HOM05D005804 ORTHO05D006849 3.5e-27 125.9 120 53.3
Potri.012G098000 Populus trichocarpa HOM05D005804 ORTHO05D006849 1.0e-26 124.4 185 40.5
Hund02443 Selenicereus undatus HOM05D005804 ORTHO05D006849 3.0e-26 122.9 126 50.0
Nitab4.5_0001180g0250 Nicotiana tabacum HOM05D005804 ORTHO05D006849 5.1e-26 122.1 123 50.4
Cfa018793 Carpinus fangiana HOM05D005804 ORTHO05D006849 3.3e-25 119.4 124 47.6
QL10p002869 Quercus lobata HOM05D005804 ORTHO05D006849 3.3e-25 119.4 124 50.0
RcHm_v2.0_Chr7g0190091 Rosa chinensis HOM05D005804 ORTHO05D006849 7.4e-25 118.2 150 44.0
Aqoxy5G03360 Aquilegia oxysepala HOM05D005804 ORTHO05D006849 1.6e-24 117.1 125 46.4
TWI23G1188 Tripterygium wilfordii HOM05D005804 ORTHO05D006849 2.2e-24 116.7 159 44.0
unitig_26.g9610 Utricularia gibba HOM05D005804 ORTHO05D006849 2.8e-24 116.3 158 41.8
CANSAT80G2783 Cannabis sativa HOM05D005804 ORTHO05D006849 3.7e-24 115.9 172 39.5
Haze_07141 Corylus avellana HOM05D005804 ORTHO05D006849 3.7e-24 115.9 124 46.8
CiPaw.11G006800 Carya illinoinensis HOM05D005804 ORTHO05D006849 1.1e-23 114.4 178 41.0
MELO3C002363.2 Cucumis melo HOM05D005804 ORTHO05D006849 1.4e-23 114.0 150 45.3
Ah.02g114880 Amaranthus hybridus HOM05D005804 ORTHO05D006849 1.8e-23 113.6 150 38.0
DCAR_007491 Daucus carota HOM05D005804 ORTHO05D006849 3.1e-23 112.8 202 37.1
FvH4_5g08360 Fragaria vesca HOM05D005804 ORTHO05D006849 3.1e-23 112.8 146 43.2
Prupe.5G150700 Prunus persica HOM05D005804 ORTHO05D006849 3.1e-23 112.8 235 34.9
Manes.14G051101 Manihot esculenta HOM05D005804 ORTHO05D006849 4.1e-23 112.5 123 47.2
MD14G1156600 Malus domestica HOM05D005804 ORTHO05D006849 5.3e-23 112.1 172 40.7
EL10Ac5g11407 Beta vulgaris HOM05D005804 ORTHO05D006849 6.9e-23 111.7 126 43.7
Ciclev10031832m.g Citrus clementina HOM05D005804 ORTHO05D006849 6.9e-23 111.7 124 47.6
Cpa.g.sc13.112 Carica papaya HOM05D005804 ORTHO05D006849 1.2e-22 110.9 127 48.8
FAN18G4115 Fragaria x ananassa HOM05D005804 ORTHO05D006849 2.0e-22 110.2 146 42.5
MD06G1141400 Malus domestica HOM05D005804 ORTHO05D006849 2.0e-22 110.2 193 37.3
FAN13G2030 Fragaria x ananassa HOM05D005804 ORTHO05D006849 3.4e-22 109.4 135 44.4
MBI11_g05331_MAGBIO Magnolia biondii HOM05D005804 ORTHO05D006849 3.4e-22 109.4 125 44.8
FAN08G1998 Fragaria x ananassa HOM05D005804 ORTHO05D006849 4.5e-22 109.0 135 44.4
FAN04G2797 Fragaria x ananassa HOM05D005804 ORTHO05D006849 7.7e-22 108.2 146 41.1
Lalb_Chr11g0069551 Lupinus albus HOM05D005804 ORTHO05D006849 1.0e-21 107.8 125 46.4
CsaV3_1G009670 Cucumis sativus L. HOM05D005804 ORTHO05D006849 1.7e-21 107.1 121 48.8
ECA247G1629 Erigeron canadensis HOM05D005804 ORTHO05D006849 1.7e-21 107.1 106 50.0
Sc22g0003840 Simmondsia chinensis HOM05D005804 ORTHO05D006849 2.9e-21 106.3 130 43.8
COL.COLO4_28132 Corchorus olitorius HOM05D005804 ORTHO05D006849 1.1e-20 104.4 130 43.1
PSO478G1623 Papaver somniferum HOM05D005804 ORTHO05D006849 1.1e-20 104.4 114 50.0
Ca_16047_v3 Cicer arietinum L. HOM05D005804 ORTHO05D006849 1.4e-20 104.0 134 44.8
arahy.Tifrunner.gnm1.ann1.Y2QIS7 Arachis hypogaea HOM05D005804 ORTHO05D006849 5.5e-20 102.1 130 46.2
Thecc.03G129500 Theobroma cacao HOM05D005804 ORTHO05D006849 7.2e-20 101.7 131 42.7
arahy.Tifrunner.gnm1.ann1.PR501J Arachis hypogaea HOM05D005804 ORTHO05D006849 9.4e-20 101.3 125 45.6
Duzib205G0351 Durio zibethinus HOM05D005804 ORTHO05D006849 1.6e-19 100.5 193 36.3
arahy.Tifrunner.gnm1.ann1.I073XK Arachis hypogaea HOM05D005804 ORTHO05D006849 2.1e-19 100.1 125 44.8
ClCG03G003790 Citrullus lanatus HOM05D005804 ORTHO05D006849 2.1e-19 100.1 121 47.1
TPR.G14211 Trifolium pratense HOM05D005804 ORTHO05D006849 3.6e-19 99.4 124 41.9
arahy.Tifrunner.gnm1.ann1.489AYV Arachis hypogaea HOM05D005804 ORTHO05D006849 4.6e-19 99.0 125 44.8
AUR62029607 Chenopodium quinoa HOM05D005804 ORTHO05D006849 6.1e-19 98.6 140 38.6
Medtr2g045240 Medicago truncatula HOM05D005804 ORTHO05D006849 1.0e-18 97.8 124 46.8
Medtr2g045245 Medicago truncatula HOM05D005804 ORTHO05D006849 1.0e-18 97.8 124 46.8
Medtr3g099220 Medicago truncatula HOM05D005804 ORTHO05D006849 1.0e-18 97.8 124 46.8
Gorai.001G058800 Gossypium raimondii HOM05D005804 ORTHO05D006849 1.8e-18 97.1 164 39.0
Psat5g051400 Pisum sativum HOM05D005804 ORTHO05D006849 3.0e-18 96.3 172 36.6
AL7G28300 Arabidopsis lyrata HOM05D005804 ORTHO05D006849 3.9e-18 95.9 152 40.1
Sp7g22880 Schrenkiella parvula HOM05D005804 ORTHO05D006849 5.1e-18 95.5 126 43.7
THA.LOC104825017 Tarenaya hassleriana HOM05D005804 ORTHO05D006849 6.7e-18 95.1 121 42.1
Sed0001636 Sechium edule HOM05D005804 ORTHO05D006849 8.8e-18 94.7 125 42.4
Thhalv10025155m.g Eutrema salsugineum HOM05D005804 ORTHO05D006849 1.5e-17 94.0 127 43.3
Aa31LG7G10880 Aethionema arabicum HOM05D005804 ORTHO05D006849 2.2e-16 90.1 125 41.6
AT4G24900 Arabidopsis thaliana HOM05D005804 ORTHO05D006849 2.8e-16 89.7 122 44.3
AUR62034829 Chenopodium quinoa HOM05D005804 ORTHO05D006849 8.2e-16 88.2 128 39.1
AUR62034830 Chenopodium quinoa HOM05D005804 ORTHO05D006849 8.2e-16 88.2 128 39.1
VMungo1309G0122 Vigna mungo HOM05D005804 ORTHO05D006849 1.1e-15 87.8 122 43.4
Zm00001eb102430 Zea mays HOM05D005804 ORTHO05D006849 1.1e-15 87.8 114 44.7
Os09g0506900 Oryza sativa ssp. japonica HOM05D005804 ORTHO05D006849 3.1e-15 86.3 114 43.9
Lj1g0008882 Lotus japonicus HOM05D005804 ORTHO05D006849 2.0e-14 83.6 127 42.5
BcaNung06008 Brassica carinata HOM05D005804 ORTHO05D006849 2.6e-14 83.2 115 43.5
A01p16190 Brassica napus HOM05D005804 ORTHO05D006849 7.7e-14 81.6 115 42.6
BraA01t01555Z Brassica rapa HOM05D005804 ORTHO05D006849 1.3e-13 80.9 115 42.6
HPP92_013611 Vanilla planifolia HOM05D005804 ORTHO05D006849 2.9e-13 79.7 116 37.9
Glyma.06G170000 Glycine max HOM05D005804 ORTHO05D006849 5.5e-12 75.5 68 54.4
BcaC09g52237 Brassica carinata HOM05D005804 ORTHO05D006849 7.2e-12 75.1 147 38.8
C01p20180 Brassica napus HOM05D005804 ORTHO05D006849 7.2e-12 75.1 147 38.8
BolC1t01947H Brassica oleracea HOM05D005804 ORTHO05D006849 7.2e-12 75.1 147 38.8
Gohir.A07G051132 Gossypium hirsutum HOM05D005804 ORTHO05D006849 4.7e-11 72.4 71 46.5
SHI10578 Sapria himalayana HOM05D005804 ORTHO05D006849 4.7e-11 72.4 125 39.2
Gohir.D07G055532 Gossypium hirsutum HOM05D005804 ORTHO05D006849 6.1e-11 72.0 71 46.5
Phvul.009G166301 Phaseolus vulgaris HOM05D005804 ORTHO05D006849 2.3e-10 70.1 83 45.8
CDE05G3468 Ceratophyllum demersum HOM05D005804 ORTHO05D006849 8.8e-10 68.2 86 41.9
Carub.0007s1617 Capsella rubella HOM05D005804 ORTHO05D006849 4.4e-09 65.9 55 52.7
Eucgr.K02724 Eucalyptus grandis HOM05D005804 ORTHO05D006849 2.2e-08 63.5 89 43.8
SEGI_29979 Sequoiadendron giganteum HOM05D005804 ORTHO05D006849 8.2e-08 61.6 111 32.4
SGA_v2.0_scaffold110G31174 Striga asiatica HOM05D052586 ORTHO05D006849 9.1e-07 58.2 33 72.7


User provided reference genes

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