Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu016033.1 Olea europaea HOM05D014319 ORTHO05D006922 5.5e-59 230.7 113 100.0
Dinv05722 Davidia involucrata HOM05D003159 ORTHO05D003780 1.2e-16 90.1 85 60.0
Dinv30121 Davidia involucrata HOM05D007517 ORTHO05D006922 8.3e-15 84.0 88 54.5
Peaxi162Scf00519g00016 Petunia axillaris HOM05D014319 ORTHO05D006922 1.1e-14 83.6 111 45.9
Rhsim05G0176100 Rhododendron simsii HOM05D007517 ORTHO05D006922 2.4e-14 82.4 115 47.8
Potri.019G013000 Populus trichocarpa HOM05D007517 ORTHO05D006922 1.0e-12 77.0 116 44.0
PGSC0003DMG400000987 Solanum tuberosum HOM05D014319 ORTHO05D006922 5.0e-12 74.7 124 41.9
CAN.G1256.1 Capsicum annuum HOM05D014319 ORTHO05D006922 1.1e-11 73.6 107 43.0
Rhsim05G0177900 Rhododendron simsii HOM05D007517 ORTHO05D006922 1.5e-11 73.2 104 51.0
Nitab4.5_0005247g0020 Nicotiana tabacum HOM05D014319 ORTHO05D006922 1.9e-11 72.8 123 40.7
Sabra13G0039900 Salix brachista HOM05D007517 ORTHO05D006922 1.6e-10 69.7 115 41.7
Potri.019G012700 Populus trichocarpa HOM05D007517 ORTHO05D006922 2.1e-10 69.3 116 40.5
Potri.013G043600 Populus trichocarpa HOM05D007517 ORTHO05D006922 2.8e-10 68.9 115 39.1
Potri.019G012400 Populus trichocarpa HOM05D007517 ORTHO05D006922 6.2e-10 67.8 115 38.3
Migut.F00819 Erythranthe guttata HOM05D014319 ORTHO05D006922 1.4e-09 66.6 99 48.5
Sopen11g002160 Solanum pennellii HOM05D014319 ORTHO05D006922 1.4e-09 66.6 121 37.2
Solyc11g006240.2 Solanum lycopersicum HOM05D014319 ORTHO05D006922 5.2e-09 64.7 121 38.0
Sabra13G0040000 Salix brachista HOM05D007517 ORTHO05D006922 6.8e-09 64.3 107 43.9
Sabra13G0040100 Salix brachista HOM05D007517 ORTHO05D006922 6.8e-09 64.3 107 43.9
Sabra13G0040200 Salix brachista HOM05D007517 ORTHO05D006922 6.8e-09 64.3 107 43.9
Sabra13G0040300 Salix brachista HOM05D007517 ORTHO05D006922 6.8e-09 64.3 107 43.9
Potri.019G012702 Populus trichocarpa HOM05D007517 ORTHO05D006922 8.9e-09 63.9 117 41.9
Cpa.g.sc162.5 Carica papaya HOM05D007517 ORTHO05D006922 4.4e-08 61.6 103 40.8
Potri.019G012900 Populus trichocarpa HOM05D007517 ORTHO05D006922 9.9e-08 60.5 117 40.2
CsaV3_2G003890 Cucumis sativus L. HOM05D017963 ORTHO05D020474 1.7e-07 59.7 98 41.8
Sabra19G0017200 Salix brachista HOM05D007517 ORTHO05D006922 2.9e-07 58.9 98 37.8
Gohir.A08G216801 Gossypium hirsutum HOM05D007517 ORTHO05D006922 6.4e-07 57.8 89 43.8
Potri.019G012601 Populus trichocarpa HOM05D007517 ORTHO05D006922 8.3e-07 57.4 115 38.3
Sc05g0000830 Simmondsia chinensis HOM05D007517 ORTHO05D006922 8.3e-07 57.4 92 43.5
Nn3g19573 Nelumbo nucifera HOM05D007967 ORTHO05D008195 1.9e-06 56.2 98 38.8
COL.COLO4_15407 Corchorus olitorius HOM05D007517 ORTHO05D006922 2.4e-06 55.8 78 42.3
Gohir.A13G169025 Gossypium hirsutum HOM05D007517 ORTHO05D006922 5.4e-06 54.7 94 38.3
Oeu008800.1 Olea europaea HOM05D007517 ORTHO05D008195 5.4e-06 54.7 67 53.7
Glyma.10G164000 Glycine max HOM05D007517 ORTHO05D006922 7.1e-06 54.3 62 45.2
Gorai.013G186200 Gossypium raimondii HOM05D007517 ORTHO05D006922 9.2e-06 53.9 95 37.9
Manes.15G037400 Manihot esculenta HOM05D007967 ORTHO05D008195 9.2e-06 53.9 89 40.4
Thecc.05G277600 Theobroma cacao HOM05D007517 ORTHO05D006922 9.2e-06 53.9 60 48.3


User provided reference genes

Program Settings