Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu016031.1 Olea europaea HOM05D001494 ORTHO05D001364 4.1e-41 171.0 89 100.0
Cc02_g09130 Coffea canephora HOM05D001494 ORTHO05D001364 5.0e-15 84.3 123 51.2
Duzib106G1326 Durio zibethinus HOM05D001494 ORTHO05D001364 8.6e-15 83.6 123 48.8
Hma1.2p1_0345F.1_g131270 Hydrangea macrophylla HOM05D001494 ORTHO05D001364 4.2e-14 81.3 113 53.1
Peaxi162Scf00135g01012 Petunia axillaris HOM05D001494 ORTHO05D001364 4.2e-14 81.3 100 57.0
CSS0035099 Camellia sinensis var. sinensis HOM05D001494 ORTHO05D001364 7.2e-14 80.5 100 56.0
CSS0050322 Camellia sinensis var. sinensis HOM05D001494 ORTHO05D001364 7.2e-14 80.5 100 56.0
CiPaw.08G119400 Carya illinoinensis HOM05D001494 ORTHO05D001364 1.2e-13 79.7 91 57.1
Ciclev10022144m.g Citrus clementina HOM05D001494 ORTHO05D001364 1.2e-13 79.7 119 50.4
Cfa006389 Carpinus fangiana HOM05D001494 ORTHO05D001364 6.1e-13 77.4 120 46.7
Haze_04387 Corylus avellana HOM05D001494 ORTHO05D001364 6.1e-13 77.4 120 46.7
Manes.08G136900 Manihot esculenta HOM05D001494 ORTHO05D001364 8.0e-13 77.0 116 50.0
Actinidia03298 Actinidia chinensis HOM05D001494 ORTHO05D001364 1.4e-12 76.3 120 49.2
COL.COLO4_15409 Corchorus olitorius HOM05D001494 ORTHO05D001364 3.0e-12 75.1 113 49.6
TAR633G0935 Trochodendron aralioides HOM05D001494 ORTHO05D001364 5.2e-12 74.3 122 45.1
TAR633G1765 Trochodendron aralioides HOM05D001494 ORTHO05D001364 5.2e-12 74.3 122 45.1
TWI56G0132 Tripterygium wilfordii HOM05D001494 ORTHO05D001364 8.9e-12 73.6 118 46.6
TWI56G1137 Tripterygium wilfordii HOM05D001494 ORTHO05D001364 8.9e-12 73.6 118 46.6
Atru.chr2.881 Acer truncatum HOM05D001494 ORTHO05D001364 1.2e-11 73.2 119 47.1
Thecc.05G277400 Theobroma cacao HOM05D001494 ORTHO05D001364 1.5e-11 72.8 108 49.1
MBI04_g10916_MAGBIO Magnolia biondii HOM05D001494 ORTHO05D001364 3.4e-11 71.6 121 43.8
Oeu031436.1 Olea europaea HOM05D001494 ORTHO05D001364 4.4e-11 71.2 118 48.3
Oeu033257.1 Olea europaea HOM05D001494 ORTHO05D001364 7.5e-11 70.5 118 46.6
CiPaw.07G070300 Carya illinoinensis HOM05D001494 ORTHO05D001364 9.8e-11 70.1 92 54.3
Gorai.007G279600 Gossypium raimondii HOM05D001494 ORTHO05D001364 9.8e-11 70.1 124 45.2
QL03p028987 Quercus lobata HOM05D001494 ORTHO05D001364 9.8e-11 70.1 116 46.6
Potri.013G043700 Populus trichocarpa HOM05D001494 ORTHO05D001364 1.3e-10 69.7 106 50.0
MELO3C004407.2 Cucumis melo HOM05D001494 ORTHO05D001364 1.7e-10 69.3 121 45.5
Gorai.013G186300 Gossypium raimondii HOM05D001494 ORTHO05D001364 1.7e-10 69.3 113 47.8
Sabra13G0040500 Salix brachista HOM05D001494 ORTHO05D001364 2.2e-10 68.9 106 50.9
GSVIVG01036262001 Vitis vinifera HOM05D001494 ORTHO05D001364 2.8e-10 68.6 79 55.7
Dinv05727 Davidia involucrata HOM05D001494 ORTHO05D001364 6.3e-10 67.4 100 52.0
Cpa.g.sc162.7 Carica papaya HOM05D001494 ORTHO05D001364 8.3e-10 67.0 123 43.9
Gohir.A13G169000 Gossypium hirsutum HOM05D001494 ORTHO05D001364 8.3e-10 67.0 113 46.0
TAR365G1012 Trochodendron aralioides HOM05D001494 ORTHO05D001364 8.3e-10 67.0 113 46.9
TAR406G0006 Trochodendron aralioides HOM05D001494 ORTHO05D001364 8.3e-10 67.0 113 46.9
vmacro20007 Vaccinium macrocarpon HOM05D001494 ORTHO05D001364 8.3e-10 67.0 112 44.6
Sabra19G0017000 Salix brachista HOM05D001494 ORTHO05D001364 1.1e-09 66.6 102 49.0
Sabra19G0026200 Salix brachista HOM05D001494 ORTHO05D001364 1.1e-09 66.6 102 49.0
Gohir.A11G250400 Gossypium hirsutum HOM05D001494 ORTHO05D001364 1.4e-09 66.2 108 47.2
Potri.019G013100 Populus trichocarpa HOM05D001494 ORTHO05D001364 1.4e-09 66.2 104 50.0
ClCG02G016890 Citrullus lanatus HOM05D001494 ORTHO05D001364 1.8e-09 65.9 120 42.5
CsaV3_2G003880 Cucumis sativus L. HOM05D001494 ORTHO05D001364 1.8e-09 65.9 101 48.5
Aqoxy5G00296 Aquilegia oxysepala HOM05D001494 ORTHO05D001364 2.4e-09 65.5 110 42.7
MD04G1227900 Malus domestica HOM05D001494 ORTHO05D001364 2.4e-09 65.5 113 45.1
Gohir.D11G261100 Gossypium hirsutum HOM05D001494 ORTHO05D001364 3.1e-09 65.1 104 49.0
Gohir.D13G174400 Gossypium hirsutum HOM05D001494 ORTHO05D001364 3.1e-09 65.1 113 45.1
Nn3g19574 Nelumbo nucifera HOM05D001494 ORTHO05D001364 3.1e-09 65.1 122 45.1
TAR636G3277 Trochodendron aralioides HOM05D001494 ORTHO05D001364 3.1e-09 65.1 122 41.8
CDE04G0014 Ceratophyllum demersum HOM05D001494 ORTHO05D001364 4.1e-09 64.7 101 45.5
Nitab4.5_0000930g0090 Nicotiana tabacum HOM05D001494 ORTHO05D001364 4.1e-09 64.7 70 60.0
Dinv30122 Davidia involucrata HOM05D001494 ORTHO05D001364 5.4e-09 64.3 99 49.5
Manes.09G150200 Manihot esculenta HOM05D001494 ORTHO05D001364 5.4e-09 64.3 102 48.0
VMungo0720G1367 Vigna mungo HOM05D001494 ORTHO05D001364 5.4e-09 64.3 108 46.3
CDE07G0517 Ceratophyllum demersum HOM05D001494 ORTHO05D001364 7.0e-09 63.9 99 45.5
MD12G1244500 Malus domestica HOM05D001494 ORTHO05D001364 7.0e-09 63.9 113 44.2
Glyma.10G164100 Glycine max HOM05D001494 ORTHO05D001364 9.2e-09 63.5 108 45.4
Lalb_Chr06g0168171 Lupinus albus HOM05D001494 ORTHO05D001364 9.2e-09 63.5 110 48.2
Lalb_Chr06g0171791 Lupinus albus HOM05D001494 ORTHO05D001364 1.6e-08 62.8 110 48.2
PSO832G0149 Papaver somniferum HOM05D001494 ORTHO05D001364 1.6e-08 62.8 119 43.7
HPP92_010441 Vanilla planifolia HOM05D001494 ORTHO05D001364 1.6e-08 62.8 107 46.7
Phvul.007G189200 Phaseolus vulgaris HOM05D001494 ORTHO05D001364 2.0e-08 62.4 108 45.4
Prupe.6G346900 Prunus persica HOM05D001494 ORTHO05D001364 2.0e-08 62.4 112 45.5
RcHm_v2.0_Chr3g0450341 Rosa chinensis HOM05D001494 ORTHO05D001364 2.0e-08 62.4 100 48.0
FvH4_6g02460 Fragaria vesca HOM05D001494 ORTHO05D001364 2.7e-08 62.0 113 45.1
FAN02G4133 Fragaria x ananassa HOM05D001494 ORTHO05D001364 2.7e-08 62.0 113 45.1
FAN05G1638 Fragaria x ananassa HOM05D001494 ORTHO05D001364 2.7e-08 62.0 113 45.1
FAN05G3907 Fragaria x ananassa HOM05D001494 ORTHO05D001364 2.7e-08 62.0 113 45.1
FAN09G0085 Fragaria x ananassa HOM05D001494 ORTHO05D001364 2.7e-08 62.0 113 45.1
FAN14G1685 Fragaria x ananassa HOM05D001494 ORTHO05D001364 2.7e-08 62.0 113 45.1
Glyma.20G226500 Glycine max HOM05D001494 ORTHO05D001364 2.7e-08 62.0 108 45.4
MBI11_g40181_MAGBIO Magnolia biondii HOM05D001494 ORTHO05D001364 2.7e-08 62.0 113 43.4
Sed0021193 Sechium edule HOM05D001494 ORTHO05D001364 2.7e-08 62.0 101 48.5
Gorai.004G248600 Gossypium raimondii HOM05D001494 ORTHO05D001364 3.5e-08 61.6 87 52.9
MSTRG.9010 Avicennia marina HOM05D001494 ORTHO05D001364 4.5e-08 61.2 77 53.2
CANSAT54G2344 Cannabis sativa HOM05D001494 ORTHO05D001364 4.5e-08 61.2 77 51.9
Lalb_Chr21g0311081 Lupinus albus HOM05D001494 ORTHO05D001364 4.5e-08 61.2 109 46.8
Gohir.A11G250520 Gossypium hirsutum HOM05D001494 ORTHO05D001364 1.0e-07 60.1 67 58.2
Rhsim05G0176000 Rhododendron simsii HOM05D001494 ORTHO05D001364 1.3e-07 59.7 112 42.9
FAN14G4019 Fragaria x ananassa HOM05D001494 ORTHO05D001364 2.3e-07 58.9 114 43.9
Gohir.D08G233900 Gossypium hirsutum HOM05D001494 ORTHO05D001364 2.9e-07 58.5 86 51.2
Gohir.A08G216900 Gossypium hirsutum HOM05D001494 ORTHO05D001364 5.0e-07 57.8 87 51.7
Glyma.19G246600 Glycine max HOM05D001494 ORTHO05D001364 1.1e-06 56.6 103 44.7
unitig_748.g8686 Utricularia gibba HOM05D001494 ORTHO05D001364 1.1e-06 56.6 97 49.5
Nitab4.5_0007901g0050 Nicotiana tabacum HOM05D001494 ORTHO05D001364 1.9e-06 55.8 70 55.7
TWI12G0628 Tripterygium wilfordii HOM05D001494 ORTHO05D001364 1.9e-06 55.8 79 48.1
Ah.06g192020 Amaranthus hybridus HOM05D001494 ORTHO05D001364 2.5e-06 55.5 103 46.6
PSO210G4488 Papaver somniferum HOM05D001494 ORTHO05D001364 2.5e-06 55.5 108 41.7
SEGI_29100 Sequoiadendron giganteum HOM05D001494 ORTHO05D001364 3.3e-06 55.1 114 44.7
CSS0037209 Camellia sinensis var. sinensis HOM05D001494 ORTHO05D001364 5.6e-06 54.3 82 48.8
VMungo0540G0407 Vigna mungo HOM05D001494 ORTHO05D001364 7.3e-06 53.9 80 48.8


User provided reference genes

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