Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu015904.1 Olea europaea HOM05D002036 ORTHO05D001913 3.0e-63 245.0 122 100.0
Oeu060059.1 Olea europaea HOM05D002036 ORTHO05D001913 5.6e-49 197.6 100 97.0
Oeu023870.1 Olea europaea HOM05D002036 ORTHO05D001913 1.5e-38 162.9 100 82.0
Oeu049192.1 Olea europaea HOM05D002036 ORTHO05D001913 4.0e-23 111.7 93 62.4
MSTRG.10276 Avicennia marina HOM05D002036 ORTHO05D001913 4.9e-21 104.8 100 56.0
Migut.J00378 Erythranthe guttata HOM05D002036 ORTHO05D001913 7.1e-20 100.9 101 51.5
MSTRG.5695 Avicennia marina HOM05D002036 ORTHO05D001913 4.6e-19 98.2 100 56.0
SalBow3G1915 Salvia bowleyana HOM05D002036 ORTHO05D001913 7.9e-19 97.4 100 52.0
THA.LOC104806591 Tarenaya hassleriana HOM05D002036 ORTHO05D001913 1.0e-18 97.1 105 49.5
Atru.chr8.2483 Acer truncatum HOM05D002036 ORTHO05D001913 1.3e-18 96.7 101 50.5
Dinv35653 Davidia involucrata HOM05D002036 ORTHO05D001913 1.7e-18 96.3 100 47.0
Thecc.05G046700 Theobroma cacao HOM05D002036 ORTHO05D001913 1.7e-18 96.3 101 49.5
THA.LOC104823434 Tarenaya hassleriana HOM05D002036 ORTHO05D001913 6.6e-18 94.4 103 48.5
SalBow4G0352 Salvia bowleyana HOM05D002036 ORTHO05D001913 1.1e-17 93.6 100 51.0
CSS0033592 Camellia sinensis var. sinensis HOM05D002036 ORTHO05D001913 1.9e-17 92.8 100 48.0
Haze_20717 Corylus avellana HOM05D002036 ORTHO05D001913 1.9e-17 92.8 102 48.0
MSTRG.19112 Avicennia marina HOM05D002036 ORTHO05D001913 3.3e-17 92.0 100 49.0
SalBow4G1789 Salvia bowleyana HOM05D002036 ORTHO05D001913 4.3e-17 91.7 100 50.0
Cfa017446 Carpinus fangiana HOM05D002036 ORTHO05D001913 5.6e-17 91.3 100 46.0
MSTRG.26749 Avicennia marina HOM05D002036 ORTHO05D001913 1.6e-16 89.7 100 51.0
SGA_v2.0_scaffold75G24914 Striga asiatica HOM05D002036 ORTHO05D001913 2.1e-16 89.4 92 51.1
Actinidia05291 Actinidia chinensis HOM05D002036 ORTHO05D001913 2.8e-16 89.0 100 47.0
CANSAT49G0001 Cannabis sativa HOM05D002036 ORTHO05D001913 2.8e-16 89.0 102 45.1
Duzib093G0032 Durio zibethinus HOM05D002036 ORTHO05D001913 2.8e-16 89.0 101 46.5
CsaV3_3G035160 Cucumis sativus L. HOM05D002036 ORTHO05D001913 1.8e-15 86.3 103 44.7
Eucgr.K03173 Eucalyptus grandis HOM05D002036 ORTHO05D001913 2.4e-15 85.9 101 46.5
TWI77G0326 Tripterygium wilfordii HOM05D002036 ORTHO05D001913 3.1e-15 85.5 90 51.1
CiPaw.10G141600 Carya illinoinensis HOM05D002036 ORTHO05D001913 5.3e-15 84.7 100 45.0
Potri.006G213700 Populus trichocarpa HOM05D002036 ORTHO05D001913 5.3e-15 84.7 113 40.7
Prupe.6G247900 Prunus persica HOM05D002036 ORTHO05D001913 5.3e-15 84.7 98 44.9
VMungo1383G2286 Vigna mungo HOM05D002036 ORTHO05D001913 5.3e-15 84.7 100 46.0
Gorai.006G176300 Gossypium raimondii HOM05D002036 ORTHO05D001913 6.9e-15 84.3 101 42.6
Gohir.D09G154900 Gossypium hirsutum HOM05D002036 ORTHO05D001913 9.0e-15 84.0 101 42.6
Hma1.2p1_0111F.1_g053220 Hydrangea macrophylla HOM05D002036 ORTHO05D001913 9.0e-15 84.0 99 47.5
QL07p046595 Quercus lobata HOM05D002036 ORTHO05D001913 1.2e-14 83.6 102 44.1
ClCG10G020860 Citrullus lanatus HOM05D002036 ORTHO05D001913 1.5e-14 83.2 103 44.7
Sabra06G0164600 Salix brachista HOM05D002036 ORTHO05D001913 2.6e-14 82.4 113 39.8
Solyc09g005750.3 Solanum lycopersicum HOM05D002036 ORTHO05D001913 2.6e-14 82.4 100 46.0
Sopen09g001640 Solanum pennellii HOM05D002036 ORTHO05D001913 2.6e-14 82.4 100 46.0
GSVIVG01025600001 Vitis vinifera HOM05D002036 ORTHO05D001913 2.6e-14 82.4 101 45.5
COL.COLO4_09164 Corchorus olitorius HOM05D002036 ORTHO05D001913 3.4e-14 82.0 101 43.6
FAN05G4012 Fragaria x ananassa HOM05D002036 ORTHO05D001913 3.4e-14 82.0 106 41.5
Glyma.19G174800 Glycine max HOM05D002036 ORTHO05D001913 3.4e-14 82.0 102 45.1
PGSC0003DMG400023907 Solanum tuberosum HOM05D002036 ORTHO05D001913 3.4e-14 82.0 100 45.0
CSS0015001 Camellia sinensis var. sinensis HOM05D002036 ORTHO05D001913 4.5e-14 81.6 100 45.0
AUR62042966 Chenopodium quinoa HOM05D002036 ORTHO05D001913 4.5e-14 81.6 99 43.4
Nitab4.5_0002995g0030 Nicotiana tabacum HOM05D002036 ORTHO05D001913 4.5e-14 81.6 112 43.8
Phvul.001G171300 Phaseolus vulgaris HOM05D002036 ORTHO05D001913 4.5e-14 81.6 101 45.5
Aa31LG10G9580 Aethionema arabicum HOM05D002036 ORTHO05D001913 5.8e-14 81.3 102 45.1
FvH4_6g14620 Fragaria vesca HOM05D002036 ORTHO05D001913 5.8e-14 81.3 106 41.5
FAN14G3656 Fragaria x ananassa HOM05D002036 ORTHO05D001913 5.8e-14 81.3 106 41.5
Gohir.A09G159300 Gossypium hirsutum HOM05D002036 ORTHO05D001913 5.8e-14 81.3 101 41.6
Gorai.002G253500 Gossypium raimondii HOM05D002036 ORTHO05D001913 5.8e-14 81.3 100 43.0
CSS0003815 Camellia sinensis var. sinensis HOM05D002036 ORTHO05D001913 7.6e-14 80.9 101 43.6
Gohir.D01G208400 Gossypium hirsutum HOM05D002036 ORTHO05D001913 7.6e-14 80.9 100 43.0
Psat6g068640 Pisum sativum HOM05D002036 ORTHO05D001913 7.6e-14 80.9 101 44.6
Rhsim05G0186600 Rhododendron simsii HOM05D002036 ORTHO05D001913 7.6e-14 80.9 100 45.0
Gohir.D04G118200 Gossypium hirsutum HOM05D002036 ORTHO05D001913 9.9e-14 80.5 101 42.6
Peaxi162Scf00039g00072 Petunia axillaris HOM05D002036 ORTHO05D001913 9.9e-14 80.5 100 46.0
Sed0000481 Sechium edule HOM05D002036 ORTHO05D001913 9.9e-14 80.5 102 43.1
Nitab4.5_0002684g0130 Nicotiana tabacum HOM05D002036 ORTHO05D001913 1.3e-13 80.1 113 43.4
Ciclev10011022m.g Citrus clementina HOM05D002036 ORTHO05D001913 1.7e-13 79.7 104 44.2
Manes.09G085700 Manihot esculenta HOM05D002036 ORTHO05D001913 1.7e-13 79.7 100 45.0
CSS0022078 Camellia sinensis var. sinensis HOM05D002036 ORTHO05D001913 2.2e-13 79.3 93 45.2
Gohir.A01G219300 Gossypium hirsutum HOM05D002036 ORTHO05D001913 2.2e-13 79.3 102 43.1
Medtr1g067570 Medicago truncatula HOM05D002036 ORTHO05D001913 2.2e-13 79.3 101 44.6
Manes.08G076600 Manihot esculenta HOM05D002036 ORTHO05D001913 2.9e-13 79.0 100 44.0
RcHm_v2.0_Chr3g0467721 Rosa chinensis HOM05D002036 ORTHO05D001913 2.9e-13 79.0 100 43.0
MELO3C009285.2 Cucumis melo HOM05D002036 ORTHO05D001913 3.8e-13 78.6 103 41.7
Duzib128G0163 Durio zibethinus HOM05D002036 ORTHO05D001913 3.8e-13 78.6 101 42.6
Cpa.g.sc114.3 Carica papaya HOM05D002036 ORTHO05D001913 4.9e-13 78.2 101 42.6
AUR62040988 Chenopodium quinoa HOM05D002036 ORTHO05D001913 4.9e-13 78.2 99 42.4
Gorai.009G423300 Gossypium raimondii HOM05D002036 ORTHO05D001913 4.9e-13 78.2 101 41.6
Gohir.A04G079000 Gossypium hirsutum HOM05D002036 ORTHO05D001913 8.4e-13 77.4 91 47.3
PGR004G2455 Punica granatum HOM05D002036 ORTHO05D001913 8.4e-13 77.4 102 46.1
Actinidia19752 Actinidia chinensis HOM05D002036 ORTHO05D001913 1.1e-12 77.0 101 42.6
CARHR163450 Cardamine hirsuta HOM05D002036 ORTHO05D001913 1.1e-12 77.0 104 43.3
Migut.L01627 Erythranthe guttata HOM05D002036 ORTHO05D001913 1.1e-12 77.0 95 45.3
Migut.L01629 Erythranthe guttata HOM05D002036 ORTHO05D001913 1.1e-12 77.0 95 45.3
FAN09G1592 Fragaria x ananassa HOM05D002036 ORTHO05D001913 1.1e-12 77.0 106 39.6
Hund24066 Selenicereus undatus HOM05D002036 ORTHO05D001913 1.1e-12 77.0 103 41.7
Sc20g0004420 Simmondsia chinensis HOM05D002036 ORTHO05D001913 1.1e-12 77.0 101 44.6
Glyma.13G133500 Glycine max HOM05D002036 ORTHO05D001913 1.4e-12 76.6 101 45.5
Phvul.007G159500 Phaseolus vulgaris HOM05D002036 ORTHO05D001913 1.4e-12 76.6 102 41.2
Cc06_g03130 Coffea canephora HOM05D002036 ORTHO05D001913 1.9e-12 76.3 101 40.6
Potri.016G080200 Populus trichocarpa HOM05D002036 ORTHO05D001913 1.9e-12 76.3 100 43.0
vmacro20108 Vaccinium macrocarpon HOM05D002036 ORTHO05D001913 1.9e-12 76.3 93 43.0
Glyma.10G045600 Glycine max HOM05D002036 ORTHO05D001913 2.4e-12 75.9 101 44.6
Sp4g19710 Schrenkiella parvula HOM05D002036 ORTHO05D001913 2.4e-12 75.9 95 44.2
FAN02G2099 Fragaria x ananassa HOM05D002036 ORTHO05D001913 3.2e-12 75.5 102 43.1
Lj5g0022058 Lotus japonicus HOM05D002036 ORTHO05D001913 3.2e-12 75.5 100 41.0
Nitab4.5_0004207g0030 Nicotiana tabacum HOM05D002036 ORTHO05D001913 3.2e-12 75.5 113 43.4
Thhalv10016240m.g Eutrema salsugineum HOM05D002036 ORTHO05D001913 4.2e-12 75.1 114 37.7
Ah.08g212260 Amaranthus hybridus HOM05D002036 ORTHO05D001913 5.4e-12 74.7 100 44.0
DCAR_017894 Daucus carota HOM05D002036 ORTHO05D001913 1.2e-11 73.6 92 42.4
VMungo0720G0853 Vigna mungo HOM05D002036 ORTHO05D001913 1.2e-11 73.6 102 40.2
AT3G53540 Arabidopsis thaliana HOM05D002036 ORTHO05D001913 1.6e-11 73.2 104 41.3
EL10Ac7g17299 Beta vulgaris HOM05D002036 ORTHO05D001913 1.6e-11 73.2 100 42.0
Ca_09596_v3 Cicer arietinum L. HOM05D002036 ORTHO05D001913 1.6e-11 73.2 101 42.6
Sed0012455 Sechium edule HOM05D002036 ORTHO05D001913 1.6e-11 73.2 100 42.0
Ah.08g212270 Amaranthus hybridus HOM05D002036 ORTHO05D001913 2.7e-11 72.4 100 43.0
AL5G34460 Arabidopsis lyrata HOM05D002036 ORTHO05D001913 3.5e-11 72.0 105 42.9
arahy.Tifrunner.gnm1.ann1.91Z2HD Arachis hypogaea HOM05D002036 ORTHO05D001913 3.5e-11 72.0 101 42.6
GSVIVG01005967001 Vitis vinifera HOM05D002036 ORTHO05D001913 3.5e-11 72.0 107 42.1
THA.LOC104805416 Tarenaya hassleriana HOM05D002036 ORTHO05D001913 4.6e-11 71.6 100 39.0
HanXRQChr14g0453801 Helianthus annuus HOM05D002036 ORTHO05D001913 6.0e-11 71.2 99 42.4
MD12G1134300 Malus domestica HOM05D002036 ORTHO05D001913 6.0e-11 71.2 91 39.6
Sabra16G0088100 Salix brachista HOM05D002036 ORTHO05D001913 7.9e-11 70.9 101 41.6
Glyma.03G173900 Glycine max HOM05D002036 ORTHO05D001913 1.0e-10 70.5 101 42.6
CsaV3_4G024630 Cucumis sativus L. HOM05D002036 ORTHO05D001913 1.3e-10 70.1 105 40.0
unitig_749.g14259 Utricularia gibba HOM05D002036 ORTHO05D001913 1.3e-10 70.1 101 38.6
Dinv37219 Davidia involucrata HOM05D002036 ORTHO05D001913 1.8e-10 69.7 84 42.9
Aqoxy4G03055 Aquilegia oxysepala HOM05D002036 ORTHO05D001913 3.0e-10 68.9 105 41.0
BcaB02g07777 Brassica carinata HOM05D002036 ORTHO05D001913 3.0e-10 68.9 104 38.5
Carub.0005s2012 Capsella rubella HOM05D002036 ORTHO05D001913 3.9e-10 68.6 104 40.4
BraA05t19823Z Brassica rapa HOM05D002036 ORTHO05D001913 5.1e-10 68.2 100 39.0
BcaB01g00265 Brassica carinata HOM05D002036 ORTHO05D001913 6.7e-10 67.8 103 41.7
MELO3C003096.2 Cucumis melo HOM05D002036 ORTHO05D001913 8.7e-10 67.4 103 38.8
Dinv25954 Davidia involucrata HOM05D002036 ORTHO05D001913 8.7e-10 67.4 110 40.0
BcaC08g44633 Brassica carinata HOM05D002036 ORTHO05D001913 1.1e-09 67.0 100 40.0
C06p21510 Brassica napus HOM05D002036 ORTHO05D001913 1.1e-09 67.0 100 40.0
SGA_v2.0_scaffold126G33842 Striga asiatica HOM05D002036 ORTHO05D001913 1.1e-09 67.0 106 44.3
Sed0002534 Sechium edule HOM05D002036 ORTHO05D001913 1.5e-09 66.6 101 38.6
ClCG04G008520 Citrullus lanatus HOM05D002036 ORTHO05D001913 2.5e-09 65.9 103 37.9
PSO339G0404 Papaver somniferum HOM05D002036 ORTHO05D001913 2.5e-09 65.9 104 38.5
A09p46550 Brassica napus HOM05D002036 ORTHO05D001913 3.3e-09 65.5 129 34.1
BraA09t40120Z Brassica rapa HOM05D002036 ORTHO05D001913 3.3e-09 65.5 129 34.1
CSS0027078 Camellia sinensis var. sinensis HOM05D002036 ORTHO05D001913 5.6e-09 64.7 107 39.3
Thhalv10010116m.g Eutrema salsugineum HOM05D002036 ORTHO05D001913 5.6e-09 64.7 103 37.9
Lj1g0026714 Lotus japonicus HOM05D002036 ORTHO05D001913 5.6e-09 64.7 102 40.2
MD12G1134400 Malus domestica HOM05D002036 ORTHO05D001913 5.6e-09 64.7 90 36.7
PSO206G0030 Papaver somniferum HOM05D002036 ORTHO05D001913 5.6e-09 64.7 109 39.4
Sp5g08790 Schrenkiella parvula HOM05D002036 ORTHO05D001913 5.6e-09 64.7 104 42.3
BraA07t29854Z Brassica rapa HOM05D002036 ORTHO05D001913 9.6e-09 63.9 100 39.0
unitig_16.g32857 Utricularia gibba HOM05D003877 ORTHO05D004647 9.6e-09 63.9 98 40.8
COL.COLO4_10915 Corchorus olitorius HOM05D002036 ORTHO05D001913 1.3e-08 63.5 105 36.2
BcaC07g39716 Brassica carinata HOM05D002036 ORTHO05D001913 1.6e-08 63.2 129 33.3
C08p28880 Brassica napus HOM05D002036 ORTHO05D001913 1.6e-08 63.2 129 33.3
Nitab4.5_0010623g0020 Nicotiana tabacum HOM05D002036 ORTHO05D001913 1.6e-08 63.2 94 40.4
C04p10630 Brassica napus HOM05D002036 ORTHO05D001913 2.1e-08 62.8 100 37.0
BolC6t37333H Brassica oleracea HOM05D002036 ORTHO05D001913 2.1e-08 62.8 101 39.6
A07p21720 Brassica napus HOM05D002036 ORTHO05D001913 2.8e-08 62.4 100 37.0
HanXRQChr14g0457611 Helianthus annuus HOM05D002036 ORTHO05D001913 2.8e-08 62.4 101 34.7
Lalb_Chr21g0314431 Lupinus albus HOM05D002036 ORTHO05D001913 3.7e-08 62.0 101 43.6
TAR157G0003 Trochodendron aralioides HOM05D002036 ORTHO05D001913 3.7e-08 62.0 107 39.3
TAR633G1128 Trochodendron aralioides HOM05D002036 ORTHO05D001913 3.7e-08 62.0 108 39.8
Medtr7g022810 Medicago truncatula HOM05D002036 ORTHO05D001913 4.8e-08 61.6 86 34.9
A05p08550 Brassica napus HOM05D002036 ORTHO05D001913 6.2e-08 61.2 100 36.0
BolC8t50490H Brassica oleracea HOM05D002036 ORTHO05D001913 8.1e-08 60.8 129 32.6
Lj8C90T10 Lonicera japonica HOM05D002036 ORTHO05D001913 8.1e-08 60.8 107 38.3
Medtr5g042180 Medicago truncatula HOM05D002036 ORTHO05D001913 1.1e-07 60.5 101 41.6
Psat3g186760 Pisum sativum HOM05D002036 ORTHO05D001913 1.1e-07 60.5 91 33.0
BcaC02g09154 Brassica carinata HOM05D002036 ORTHO05D001913 1.4e-07 60.1 108 37.0
C04p39020 Brassica napus HOM05D002036 ORTHO05D001913 1.4e-07 60.1 108 37.0
BolC4t25474H Brassica oleracea HOM05D002036 ORTHO05D001913 1.4e-07 60.1 108 37.0
DCAR_014830 Daucus carota HOM05D002036 ORTHO05D001913 1.4e-07 60.1 92 39.1
TPR.G15507 Trifolium pratense HOM05D002036 ORTHO05D001913 1.4e-07 60.1 86 33.7
TPR.G23073 Trifolium pratense HOM05D002036 ORTHO05D001913 1.4e-07 60.1 100 37.0
BolC4t22654H Brassica oleracea HOM05D002036 ORTHO05D001913 2.4e-07 59.3 100 36.0
Cpa.g.sc1.328 Carica papaya HOM05D002036 ORTHO05D001913 3.1e-07 58.9 108 35.2
Nn2g10515 Nelumbo nucifera HOM05D002036 ORTHO05D001913 3.1e-07 58.9 107 40.2
Phvul.008G016000 Phaseolus vulgaris HOM05D002036 ORTHO05D001913 3.1e-07 58.9 91 34.1
Duzib106G0638 Durio zibethinus HOM05D002036 ORTHO05D001913 4.0e-07 58.5 108 35.2
ECA238G3635 Erigeron canadensis HOM05D002036 ORTHO05D001913 4.0e-07 58.5 99 37.4
QL08p057863 Quercus lobata HOM05D002036 ORTHO05D001913 4.0e-07 58.5 86 36.0
VMungo1383G1185 Vigna mungo HOM05D002036 ORTHO05D001913 4.0e-07 58.5 91 34.1
Nn2g12861 Nelumbo nucifera HOM05D002036 ORTHO05D001913 5.3e-07 58.2 107 37.4
MD04G1118500 Malus domestica HOM05D002036 ORTHO05D001913 6.9e-07 57.8 90 37.8
ECA238G3596 Erigeron canadensis HOM05D002036 ORTHO05D001913 9.0e-07 57.4 101 34.7
A04p06050 Brassica napus HOM05D002036 ORTHO05D001913 1.2e-06 57.0 101 39.6
BraA04t16309Z Brassica rapa HOM05D002036 ORTHO05D001913 1.2e-06 57.0 101 39.6
Cfa001544 Carpinus fangiana HOM05D002036 ORTHO05D001913 1.2e-06 57.0 86 37.2
MBI05_g07856_MAGBIO Magnolia biondii HOM05D002036 ORTHO05D001913 1.2e-06 57.0 114 36.0
Lalb_Chr02g0153251 Lupinus albus HOM05D002036 ORTHO05D001913 2.6e-06 55.8 101 41.6
unitig_744.g24663 Utricularia gibba HOM05D002036 ORTHO05D001913 2.6e-06 55.8 58 53.4
Peaxi162Scf00015g02321 Petunia axillaris HOM05D002036 ORTHO05D001913 3.4e-06 55.5 108 36.1
TWI15G0462 Tripterygium wilfordii HOM05D002036 ORTHO05D001913 3.4e-06 55.5 105 35.2
Glyma.02G095900 Glycine max HOM05D002036 ORTHO05D001913 5.8e-06 54.7 91 31.9
Atru.chr12.568 Acer truncatum HOM05D002036 ORTHO05D001913 7.6e-06 54.3 111 31.5
Nitab4.5_0004055g0060 Nicotiana tabacum HOM05D002036 ORTHO05D001913 7.6e-06 54.3 107 36.4
Lj1g0001009 Lotus japonicus HOM05D002036 ORTHO05D001913 1.0e-05 53.9 86 36.0


User provided reference genes

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