Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu015893.1 Olea europaea HOM05D007081 ORTHO05D008834 2.8e-140 501.9 243 100.0
Oeu040853.3 Olea europaea HOM05D007081 ORTHO05D008834 1.3e-76 290.4 224 69.2
SGA_v2.0_scaffold90G27870 Striga asiatica HOM05D007081 ORTHO05D008834 6.3e-36 155.2 171 48.5
Migut.O00134 Erythranthe guttata HOM05D007081 ORTHO05D008834 4.7e-31 139.0 174 48.9
Dinv38554 Davidia involucrata HOM05D007081 ORTHO05D008834 2.6e-29 133.3 169 48.5
Cc04_g12600 Coffea canephora HOM05D007081 ORTHO05D008834 6.3e-28 128.6 194 43.3
TAR629G3400 Trochodendron aralioides HOM05D007081 ORTHO05D008834 2.7e-26 123.2 181 44.8
Peaxi162Scf00089g01519 Petunia axillaris HOM05D007081 ORTHO05D008834 4.5e-26 122.5 175 42.3
Thecc.03G023800 Theobroma cacao HOM05D007081 ORTHO05D008834 2.3e-25 120.2 183 42.1
PGSC0003DMG400018175 Solanum tuberosum HOM05D007081 ORTHO05D008834 2.9e-25 119.8 155 45.2
Nitab4.5_0010304g0020 Nicotiana tabacum HOM05D007081 ORTHO05D008834 6.6e-25 118.6 128 50.0
PGR044G1978 Punica granatum HOM05D007081 ORTHO05D008834 8.6e-25 118.2 169 41.4
Solyc03g112510.2 Solanum lycopersicum HOM05D007081 ORTHO05D008834 1.5e-24 117.5 145 44.8
Sopen03g031570 Solanum pennellii HOM05D007081 ORTHO05D008834 2.5e-24 116.7 144 45.1
Gohir.A03G091750 Gossypium hirsutum HOM05D007081 ORTHO05D008834 7.2e-24 115.2 208 39.4
Gohir.D02G120200 Gossypium hirsutum HOM05D007081 ORTHO05D008834 7.2e-24 115.2 178 41.6
Gorai.005G133700 Gossypium raimondii HOM05D007081 ORTHO05D008834 7.2e-24 115.2 178 41.6
CANSAT80G0092 Cannabis sativa HOM05D007081 ORTHO05D008834 9.5e-24 114.8 167 42.5
Lj5A128T65 Lonicera japonica HOM05D007081 ORTHO05D008834 1.2e-23 114.4 168 44.0
Prupe.5G169300 Prunus persica HOM05D007081 ORTHO05D008834 2.1e-23 113.6 180 41.7
Sc04g0001640 Simmondsia chinensis HOM05D007081 ORTHO05D008834 4.7e-23 112.5 177 41.2
CAN.G338.9 Capsicum annuum HOM05D007081 ORTHO05D008834 8.0e-23 111.7 144 43.8
THA.LOC104809251 Tarenaya hassleriana HOM05D007081 ORTHO05D008834 3.0e-22 109.8 206 36.9
Cpa.g.sc35.77 Carica papaya HOM05D007081 ORTHO05D008834 5.2e-22 109.0 153 41.2
Aa31LG2G16580 Aethionema arabicum HOM05D007081 ORTHO05D008834 6.8e-22 108.6 193 35.8
Rhsim12G0166600 Rhododendron simsii HOM05D007081 ORTHO05D008834 6.8e-22 108.6 192 39.6
COL.COLO4_30124 Corchorus olitorius HOM05D007081 ORTHO05D008834 1.2e-21 107.8 225 36.4
vmacro16631 Vaccinium macrocarpon HOM05D007081 ORTHO05D008834 1.2e-21 107.8 134 47.8
GSVIVG01007682001 Vitis vinifera HOM05D007081 ORTHO05D008834 1.5e-21 107.5 186 37.6
HanXRQChr04g0101311 Helianthus annuus HOM05D007081 ORTHO05D008834 3.4e-21 106.3 137 43.1
QL10p008493 Quercus lobata HOM05D007081 ORTHO05D008834 9.8e-21 104.8 165 41.8
QL10p008625 Quercus lobata HOM05D007081 ORTHO05D008834 9.8e-21 104.8 165 41.8
ECA247G4072 Erigeron canadensis HOM05D007081 ORTHO05D008834 1.3e-20 104.4 184 37.5
Sed0005220 Sechium edule HOM05D007081 ORTHO05D008834 2.2e-20 103.6 236 33.5
MD14G1175400 Malus domestica HOM05D007081 ORTHO05D008834 1.8e-19 100.5 175 37.1
CSS0021917 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 5.4e-19 99.0 213 37.1
TWI39G1151 Tripterygium wilfordii HOM05D007081 ORTHO05D008834 5.4e-19 99.0 144 41.0
RcHm_v2.0_Chr7g0192971 Rosa chinensis HOM05D007081 ORTHO05D008834 7.0e-19 98.6 180 36.7
Sp7g31890 Schrenkiella parvula HOM05D007081 ORTHO05D008834 7.0e-19 98.6 152 38.8
CiPaw.11G022400 Carya illinoinensis HOM05D007081 ORTHO05D008834 9.2e-19 98.2 201 40.3
FvH4_5g05850 Fragaria vesca HOM05D007081 ORTHO05D008834 1.2e-18 97.8 174 36.8
Haze_07555 Corylus avellana HOM05D007081 ORTHO05D008834 2.0e-18 97.1 129 46.5
Lsat_1_v5_gn_1_28080 Lactuca sativa HOM05D007081 ORTHO05D008834 2.7e-18 96.7 191 37.2
Cfa019177 Carpinus fangiana HOM05D007081 ORTHO05D008834 3.5e-18 96.3 138 42.8
MBI10_g32034_MAGBIO Magnolia biondii HOM05D007081 ORTHO05D008834 3.5e-18 96.3 150 40.7
DCAR_016469 Daucus carota HOM05D007081 ORTHO05D008834 5.9e-18 95.5 182 36.3
Eucgr.K02814 Eucalyptus grandis HOM05D007081 ORTHO05D008834 1.0e-17 94.7 203 36.0
Duzib205G1440 Durio zibethinus HOM05D007081 ORTHO05D008834 2.3e-17 93.6 158 38.6
FAN08G1021 Fragaria x ananassa HOM05D007081 ORTHO05D008834 2.3e-17 93.6 127 41.7
Aqoxy3G02825 Aquilegia oxysepala HOM05D007081 ORTHO05D008834 3.9e-17 92.8 128 41.4
Manes.14G062600 Manihot esculenta HOM05D007081 ORTHO05D008834 3.9e-17 92.8 128 38.3
PSO063G2349 Papaver somniferum HOM05D007081 ORTHO05D008834 5.0e-17 92.4 134 41.0
C01p04690 Brassica napus HOM05D007081 ORTHO05D008834 6.6e-17 92.0 133 41.4
BolC1t00453H Brassica oleracea HOM05D007081 ORTHO05D008834 6.6e-17 92.0 133 41.4
Lalb_Chr11g0070341 Lupinus albus HOM05D007081 ORTHO05D008834 8.6e-17 91.7 173 34.1
arahy.Tifrunner.gnm1.ann1.4N1ELM Arachis hypogaea HOM05D007081 ORTHO05D008834 5.6e-16 89.0 144 40.3
arahy.Tifrunner.gnm1.ann1.G5F0QK Arachis hypogaea HOM05D007081 ORTHO05D008834 7.3e-16 88.6 190 34.2
Glyma.04G186500 Glycine max HOM05D007081 ORTHO05D008834 7.3e-16 88.6 201 31.3
Sabra02G0160000 Salix brachista HOM05D007081 ORTHO05D008834 7.3e-16 88.6 154 39.0
TPR.G31056 Trifolium pratense HOM05D007081 ORTHO05D008834 7.3e-16 88.6 196 36.2
Potri.002G197500 Populus trichocarpa HOM05D007081 ORTHO05D008834 9.5e-16 88.2 151 37.7
AT4G34140 Arabidopsis thaliana HOM05D007081 ORTHO05D008834 6.1e-15 85.5 138 40.6
Lj1g0004270 Lotus japonicus HOM05D007081 ORTHO05D008834 6.1e-15 85.5 157 35.0
AL7G17230 Arabidopsis lyrata HOM05D007081 ORTHO05D008834 8.0e-15 85.1 171 33.3
EL10Ac5g10689 Beta vulgaris HOM05D007081 ORTHO05D008834 8.0e-15 85.1 117 40.2
Carub.0007s0626 Capsella rubella HOM05D007081 ORTHO05D008834 8.0e-15 85.1 169 33.7
Hund02770 Selenicereus undatus HOM05D007081 ORTHO05D008834 8.0e-15 85.1 220 32.7
Phvul.009G175500 Phaseolus vulgaris HOM05D007081 ORTHO05D008834 1.0e-14 84.7 169 38.5
AUR62008170 Chenopodium quinoa HOM05D007081 ORTHO05D008834 1.4e-14 84.3 119 37.0
Ah.02g110780 Amaranthus hybridus HOM05D007081 ORTHO05D008834 2.3e-14 83.6 118 41.5
A01p04290 Brassica napus HOM05D007081 ORTHO05D008834 4.0e-14 82.8 131 39.7
BraA01t00418Z Brassica rapa HOM05D007081 ORTHO05D008834 4.0e-14 82.8 131 39.7
unitig_26.g9614 Utricularia gibba HOM05D007081 ORTHO05D008834 4.0e-14 82.8 76 50.0
Thhalv10025133m.g Eutrema salsugineum HOM05D007081 ORTHO05D008834 6.8e-14 82.0 178 33.7
Ca_16151_v3 Cicer arietinum L. HOM05D007081 ORTHO05D008834 2.6e-13 80.1 134 36.6
CSS0002377 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 3.4e-13 79.7 124 41.9
FAN18G1088 Fragaria x ananassa HOM05D007081 ORTHO05D008834 2.2e-12 77.0 227 30.0
PSO832G3615 Papaver somniferum HOM05D007081 ORTHO05D008834 3.7e-12 76.3 137 34.3
Psat0s2597g0120 Pisum sativum HOM05D007081 ORTHO05D008834 3.7e-12 76.3 158 33.5
Ciclev10023760m.g Citrus clementina HOM05D007081 ORTHO05D008834 1.1e-11 74.7 157 33.8
Zm00001eb122970 Zea mays HOM05D007081 ORTHO05D008834 1.9e-11 73.9 194 30.4
HPP92_000312 Vanilla planifolia HOM05D007081 ORTHO05D008834 3.2e-11 73.2 178 32.6
HPP92_000296 Vanilla planifolia HOM05D007081 ORTHO05D008834 1.2e-10 71.2 190 31.6
HPP92_000303 Vanilla planifolia HOM05D007081 ORTHO05D008834 1.2e-10 71.2 181 32.0
FAN04G1276 Fragaria x ananassa HOM05D007081 ORTHO05D008834 2.0e-10 70.5 112 38.4
CsaV3_1G001260 Cucumis sativus L. HOM05D007081 ORTHO05D008834 4.6e-10 69.3 226 30.5
CDE06G1300 Ceratophyllum demersum HOM05D007081 ORTHO05D008834 1.0e-09 68.2 125 36.8
ATR1152G054 Amborella trichopoda HOM05D007081 ORTHO05D008834 6.6e-09 65.5 153 34.6
ClCG06G017230 Citrullus lanatus HOM05D007081 ORTHO05D008834 1.5e-08 64.3 181 29.8
Nitab4.5_0022301g0010 Nicotiana tabacum HOM05D007081 ORTHO05D008834 1.9e-08 63.9 68 48.5
Nitab4.5_0001284g0100 Nicotiana tabacum HOM05D007081 ORTHO05D008834 3.6e-07 59.7 43 58.1
CAN.G12.29 Capsicum annuum HOM05D001989 ORTHO05D000346 6.2e-07 58.9 85 42.4
MELO3C026274.2 Cucumis melo HOM05D007081 ORTHO05D008834 1.4e-06 57.8 148 31.1
AUR62028747 Chenopodium quinoa HOM05D007081 ORTHO05D008834 8.9e-06 55.1 39 51.3


User provided reference genes

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