Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu015713.2 Olea europaea HOM05D002563 ORTHO05D006856 8.4e-131 470.3 230 100.0
Oeu050332.1 Olea europaea HOM05D002563 ORTHO05D006856 6.1e-81 304.7 410 47.6
MSTRG.18642 Avicennia marina HOM05D002563 ORTHO05D006856 3.3e-58 229.2 394 38.3
Migut.D02180 Erythranthe guttata HOM05D002563 ORTHO05D006856 2.1e-57 226.5 391 39.6
SGA_v2.0_scaffold61G21166 Striga asiatica HOM05D002563 ORTHO05D006856 1.2e-55 220.7 396 37.9
SalBow3G1267 Salvia bowleyana HOM05D002563 ORTHO05D006856 4.1e-53 212.2 390 37.2
Solyc08g014290.1 Solanum lycopersicum HOM05D002563 ORTHO05D006856 5.4e-53 211.8 396 37.6
Sopen08g005200 Solanum pennellii HOM05D002563 ORTHO05D006856 6.0e-52 208.4 396 37.4
CAN.G759.4 Capsicum annuum HOM05D002563 ORTHO05D006856 3.0e-51 206.1 260 46.9
PGSC0003DMG400035743 Solanum tuberosum HOM05D002563 ORTHO05D006856 1.5e-50 203.8 263 46.4
Nitab4.5_0003911g0010 Nicotiana tabacum HOM05D002563 ORTHO05D006856 5.6e-50 201.8 394 36.8
Nitab4.5_0000013g0500 Nicotiana tabacum HOM05D002563 ORTHO05D006856 1.4e-48 197.2 388 35.6
HanXRQChr02g0059111 Helianthus annuus HOM05D002563 ORTHO05D006856 6.8e-48 194.9 345 38.3
Cc03_g14310 Coffea canephora HOM05D002563 ORTHO05D006856 4.9e-46 188.7 418 34.2
vmacro00689 Vaccinium macrocarpon HOM05D002563 ORTHO05D006856 4.1e-45 185.7 394 35.8
Actinidia12129 Actinidia chinensis HOM05D002563 ORTHO05D006856 9.2e-45 184.5 276 43.1
DCAR_027518 Daucus carota HOM05D002563 ORTHO05D006856 2.1e-44 183.3 262 44.3
Manes.05G137100 Manihot esculenta HOM05D002563 ORTHO05D006856 2.1e-44 183.3 405 33.8
Peaxi162Scf00075g00133 Petunia axillaris HOM05D002563 ORTHO05D006856 1.7e-43 180.3 334 36.5
Rhsim09G0008800 Rhododendron simsii HOM05D002563 ORTHO05D006856 3.0e-43 179.5 393 34.1
CSS0022138 Camellia sinensis var. sinensis HOM05D002563 ORTHO05D006856 3.9e-43 179.1 386 35.0
CSS0039717 Camellia sinensis var. sinensis HOM05D002563 ORTHO05D006856 3.9e-43 179.1 386 35.0
CSS0049843 Camellia sinensis var. sinensis HOM05D002563 ORTHO05D006856 3.9e-43 179.1 386 35.0
PGR142G0923 Punica granatum HOM05D002563 ORTHO05D006856 3.9e-43 179.1 274 42.3
Lalb_Chr10g0093701 Lupinus albus HOM05D002563 ORTHO05D006856 2.5e-42 176.4 272 40.4
Lj6C216T6 Lonicera japonica HOM05D002563 ORTHO05D006856 7.3e-42 174.9 260 41.9
Hma1.2p1_0725F.1_g208840 Hydrangea macrophylla HOM05D002563 ORTHO05D006856 9.5e-42 174.5 394 34.5
Lj6C207T2 Lonicera japonica HOM05D002563 ORTHO05D006856 9.5e-42 174.5 260 41.9
Potri.013G127500 Populus trichocarpa HOM05D002563 ORTHO05D006856 1.2e-41 174.1 397 33.8
Nn2g13968 Nelumbo nucifera HOM05D002563 ORTHO05D006856 1.6e-41 173.7 260 42.3
Thecc.04G164500 Theobroma cacao HOM05D002563 ORTHO05D006856 1.8e-40 170.2 389 33.9
GSVIVG01035133001 Vitis vinifera HOM05D002563 ORTHO05D006856 2.3e-40 169.9 242 44.2
Sabra13G0106600 Salix brachista HOM05D002563 ORTHO05D006856 4.0e-40 169.1 394 33.2
Gorai.006G232000 Gossypium raimondii HOM05D002563 ORTHO05D006856 6.8e-40 168.3 385 32.2
Gohir.A09G213606 Gossypium hirsutum HOM05D002563 ORTHO05D006856 8.9e-40 167.9 385 32.2
Dinv18326 Davidia involucrata HOM05D002563 ORTHO05D006856 1.5e-39 167.2 202 47.5
MBI07_g11490_MAGBIO Magnolia biondii HOM05D002563 ORTHO05D006856 2.0e-39 166.8 281 38.4
Ah.07g205320 Amaranthus hybridus HOM05D002563 ORTHO05D006856 2.6e-39 166.4 276 40.6
Lsat_1_v5_gn_6_67620 Lactuca sativa HOM05D002563 ORTHO05D006856 2.6e-39 166.4 387 32.8
Sc19g0002250 Simmondsia chinensis HOM05D002563 ORTHO05D006856 7.5e-39 164.9 262 38.9
EL10Ac3g05246 Beta vulgaris HOM05D002563 ORTHO05D006856 9.9e-39 164.5 276 38.8
Prupe.2G031200 Prunus persica HOM05D002563 ORTHO05D006856 1.3e-38 164.1 261 39.8
Gohir.D09G212200 Gossypium hirsutum HOM05D002563 ORTHO05D006856 2.2e-38 163.3 385 31.7
Dinv33212 Davidia involucrata HOM05D002563 ORTHO05D006856 3.7e-38 162.5 216 45.8
Duzib212G0374 Durio zibethinus HOM05D002563 ORTHO05D006856 1.9e-37 160.2 260 40.0
Thhalv10007840m.g Eutrema salsugineum HOM05D002563 ORTHO05D006856 7.1e-37 158.3 279 40.5
CANSAT56G0069 Cannabis sativa HOM05D002563 ORTHO05D006856 9.2e-37 157.9 331 35.3
AUR62006064 Chenopodium quinoa HOM05D002563 ORTHO05D006856 1.2e-36 157.5 331 34.4
ClCG11G013560 Citrullus lanatus HOM05D002563 ORTHO05D006856 1.6e-36 157.1 275 38.2
RcHm_v2.0_Chr4g0435781 Rosa chinensis HOM05D002563 ORTHO05D006856 1.6e-36 157.1 262 38.2
Atru.chr2.1563 Acer truncatum HOM05D002563 ORTHO05D006856 2.1e-36 156.8 397 31.7
PSO210G6884 Papaver somniferum HOM05D002563 ORTHO05D006856 2.1e-36 156.8 278 37.8
SHI26106 Sapria himalayana HOM05D002563 ORTHO05D006856 2.1e-36 156.8 341 32.3
THA.LOC104812127 Tarenaya hassleriana HOM05D002563 ORTHO05D006856 2.1e-36 156.8 202 45.0
PSO832G2579 Papaver somniferum HOM05D002563 ORTHO05D006856 2.7e-36 156.4 281 36.7
CiPaw.01G168700 Carya illinoinensis HOM05D002563 ORTHO05D006856 3.5e-36 156.0 274 39.8
CiPaw.01G092400 Carya illinoinensis HOM05D002563 ORTHO05D006856 4.6e-36 155.6 381 34.1
MELO3C011856.2 Cucumis melo HOM05D002563 ORTHO05D006856 6.0e-36 155.2 275 38.2
TAR633G0323 Trochodendron aralioides HOM05D002563 ORTHO05D006856 6.0e-36 155.2 202 45.5
Cpa.g.sc9.376 Carica papaya HOM05D002563 ORTHO05D006856 7.8e-36 154.8 261 38.7
Ciclev10020495m.g Citrus clementina HOM05D002563 ORTHO05D006856 7.8e-36 154.8 391 32.0
CsaV3_5G030180 Cucumis sativus L. HOM05D002563 ORTHO05D006856 7.8e-36 154.8 275 38.2
Carub.0005s1262 Capsella rubella HOM05D002563 ORTHO05D006856 1.0e-35 154.5 276 39.9
FvH4_3g25460 Fragaria vesca HOM05D002563 ORTHO05D006856 1.0e-35 154.5 260 38.8
FAN11G2708 Fragaria x ananassa HOM05D002563 ORTHO05D006856 1.0e-35 154.5 260 38.8
Lsat_1_v5_gn_2_40101 Lactuca sativa HOM05D002563 ORTHO05D006856 1.0e-35 154.5 202 45.5
Aqoxy6G02691 Aquilegia oxysepala HOM05D002563 ORTHO05D006856 1.7e-35 153.7 387 31.5
ECA246G2001 Erigeron canadensis HOM05D002563 ORTHO05D006856 1.7e-35 153.7 341 33.1
CARHR019100 Cardamine hirsuta HOM05D002563 ORTHO05D006856 2.3e-35 153.3 279 39.1
Haze_00849 Corylus avellana HOM05D002563 ORTHO05D006856 2.3e-35 153.3 387 32.0
FAN25G2288 Fragaria x ananassa HOM05D002563 ORTHO05D006856 2.3e-35 153.3 258 38.0
AL1G30910 Arabidopsis lyrata HOM05D002563 ORTHO05D006856 3.0e-35 152.9 264 39.4
AT1G18480 Arabidopsis thaliana HOM05D002563 ORTHO05D006856 3.0e-35 152.9 264 39.0
arahy.Tifrunner.gnm1.ann1.SY3PZC Arachis hypogaea HOM05D002563 ORTHO05D006856 3.0e-35 152.9 216 40.7
Cfa015672 Carpinus fangiana HOM05D002563 ORTHO05D006856 3.0e-35 152.9 389 32.6
VMungo1080G0795 Vigna mungo HOM05D002563 ORTHO05D006856 3.0e-35 152.9 273 37.0
Sed0011720 Sechium edule HOM05D002563 ORTHO05D006856 5.1e-35 152.1 376 32.7
FAN21G2308 Fragaria x ananassa HOM05D002563 ORTHO05D006856 6.6e-35 151.8 260 38.5
arahy.Tifrunner.gnm1.ann1.W46PLF Arachis hypogaea HOM05D002563 ORTHO05D006856 8.6e-35 151.4 216 40.7
Lj1g0002201 Lotus japonicus HOM05D002563 ORTHO05D006856 8.6e-35 151.4 381 32.3
Ca_27098_v3 Cicer arietinum L. HOM05D002563 ORTHO05D006856 1.5e-34 150.6 262 38.2
BcaB07g31856 Brassica carinata HOM05D002563 ORTHO05D006856 1.9e-34 150.2 262 39.7
BcaC07g38912 Brassica carinata HOM05D002563 ORTHO05D006856 2.5e-34 149.8 258 38.8
C08p18660 Brassica napus HOM05D002563 ORTHO05D006856 2.5e-34 149.8 258 38.8
Glyma.19G062400 Glycine max HOM05D002563 ORTHO05D006856 2.5e-34 149.8 324 34.0
BraA08t34971Z Brassica rapa HOM05D002563 ORTHO05D006856 4.3e-34 149.1 258 39.1
Psat4g124240 Pisum sativum HOM05D002563 ORTHO05D006856 5.6e-34 148.7 275 37.8
A08p30380 Brassica napus HOM05D002563 ORTHO05D006856 9.5e-34 147.9 258 39.1
COL.COLO4_38112 Corchorus olitorius HOM05D002563 ORTHO05D006856 9.5e-34 147.9 333 34.8
Sp1g16420 Schrenkiella parvula HOM05D002563 ORTHO05D006856 9.5e-34 147.9 279 38.7
FAN16G1592 Fragaria x ananassa HOM05D002563 ORTHO05D006856 1.2e-33 147.5 260 37.7
BolC8t49492H Brassica oleracea HOM05D002563 ORTHO05D006856 1.6e-33 147.1 258 38.8
MD02G1292100 Malus domestica HOM05D002563 ORTHO05D006856 1.6e-33 147.1 202 42.6
CDE07G0327 Ceratophyllum demersum HOM05D002563 ORTHO05D006856 2.8e-33 146.4 202 40.1
MD07G1034500 Malus domestica HOM05D002563 ORTHO05D006856 2.8e-33 146.4 202 41.6
ECA236G2542 Erigeron canadensis HOM05D002563 ORTHO05D006856 1.4e-32 144.1 202 41.1
HanXRQChr10g0285981 Helianthus annuus HOM05D002563 ORTHO05D006856 1.4e-32 144.1 202 41.6
BcaC05g25741 Brassica carinata HOM05D002563 ORTHO05D006856 1.8e-32 143.7 265 38.5
TWI63G0091 Tripterygium wilfordii HOM05D002563 ORTHO05D006856 1.8e-32 143.7 275 35.3
TWI15G0988 Tripterygium wilfordii HOM05D002563 ORTHO05D006856 3.1e-32 142.9 282 35.5
ATR0743G194 Amborella trichopoda HOM05D002563 ORTHO05D006856 4.0e-32 142.5 252 35.7
QL10p056534 Quercus lobata HOM05D002563 ORTHO05D006856 6.8e-32 141.7 400 30.8
BraA06t24577Z Brassica rapa HOM05D002563 ORTHO05D006856 8.9e-32 141.4 262 38.2
Aa31LG7G3150 Aethionema arabicum HOM05D002563 ORTHO05D006856 1.2e-31 141.0 216 41.2
Medtr7g006040 Medicago truncatula HOM05D002563 ORTHO05D006856 1.5e-31 140.6 329 32.2
CDE04G3450 Ceratophyllum demersum HOM05D002563 ORTHO05D006856 3.4e-31 139.4 202 39.6
TPR.G648 Trifolium pratense HOM05D002563 ORTHO05D006856 4.4e-31 139.0 382 30.6
Phvul.005G085100 Phaseolus vulgaris HOM05D002563 ORTHO05D006856 5.8e-31 138.7 202 38.6
AUR62035563 Chenopodium quinoa HOM05D002563 ORTHO05D006856 7.6e-31 138.3 251 35.5
TWI63G0944 Tripterygium wilfordii HOM05D002563 ORTHO05D006856 9.9e-31 137.9 261 36.4
C05p16740 Brassica napus HOM05D002563 ORTHO05D006856 1.7e-30 137.1 252 36.9
BolC5t30374H Brassica oleracea HOM05D000001 ORTHO05D000003 1.7e-30 137.1 252 36.9
A06p14520 Brassica napus HOM05D000001 ORTHO05D000003 2.9e-30 136.3 249 36.9
Lsat_1_v5_gn_2_40161 Lactuca sativa HOM05D002563 ORTHO05D006856 1.9e-29 133.7 202 38.6
Psat5g296240 Pisum sativum HOM05D002563 ORTHO05D006856 7.1e-29 131.7 203 40.9
Os11g0261900 Oryza sativa ssp. japonica HOM05D002563 ORTHO05D006856 1.7e-27 127.1 209 38.3
Medtr8g064720 Medicago truncatula HOM05D002563 ORTHO05D006856 2.5e-26 123.2 330 30.0
QL10p056525 Quercus lobata HOM05D002563 ORTHO05D006856 4.3e-26 122.5 257 33.9
Zm00001eb169080 Zea mays HOM05D002563 ORTHO05D006856 3.6e-25 119.4 222 36.5
BcaB03g12983 Brassica carinata HOM05D002563 ORTHO05D006856 6.2e-25 118.6 276 35.9
Cpa.g.sc9.374 Carica papaya HOM05D002563 ORTHO05D006856 8.1e-25 118.2 219 36.5
HPP92_004650 Vanilla planifolia HOM05D002563 ORTHO05D006856 4.0e-24 115.9 246 31.7
SEGI_01120 Sequoiadendron giganteum HOM05D002563 ORTHO05D006856 2.9e-22 109.8 274 30.3
Mapoly0109s0024 Marchantia polymorpha HOM05D002563 ORTHO05D006856 3.8e-22 109.4 196 36.2
Pp3c17_14050 Physcomitrium patens HOM05D002563 ORTHO05D006856 1.4e-21 107.5 196 33.7
SMO358G0530 Selaginella moellendorffii HOM05D002563 ORTHO05D006856 1.2e-20 104.4 196 32.1
SEGI_18926 Sequoiadendron giganteum HOM05D002563 ORTHO05D006856 1.2e-20 104.4 270 29.6
AagrBONN_evm.TU.Sc2ySwM_344.2705 Anthoceros agrestis HOM05D002563 ORTHO05D006856 3.3e-18 96.3 195 31.3
unitig_899.g15349 Utricularia gibba HOM05D002563 ORTHO05D006856 1.8e-16 90.5 93 48.4
Zm00001eb412760 Zea mays HOM05D002563 ORTHO05D005948 6.0e-12 75.5 119 42.0
Cre17.g718800 Chlamydomonas reinhardtii HOM05D002563 ORTHO05D006856 5.3e-08 62.4 93 37.6
Zm00001eb260640 Zea mays HOM05D002563 ORTHO05D005948 9.0e-08 61.6 124 37.1
PRCOL_00003638 Prasinoderma coloniale HOM05D002563 ORTHO05D006856 7.6e-07 58.5 92 35.9
Zm00001eb279560 Zea mays HOM05D005054 ORTHO05D005948 1.7e-06 57.4 78 47.4
MCO05G011 Micromonas commoda HOM05D002563 ORTHO05D006856 2.9e-06 56.6 203 25.1


User provided reference genes

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