Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu015712.2 Olea europaea HOM05D003922 ORTHO05D004492 2.7e-126 455.3 222 100.0
Oeu050329.1 Olea europaea HOM05D003922 ORTHO05D004492 6.5e-64 248.1 222 62.6
Dinv18325 Davidia involucrata HOM05D003922 ORTHO05D004492 1.6e-57 226.9 222 57.2
GSVIVG01035132001 Vitis vinifera HOM05D003922 ORTHO05D004492 9.5e-55 217.6 222 53.6
Cc03_g14390 Coffea canephora HOM05D003922 ORTHO05D004492 2.1e-54 216.5 222 55.0
CSS0038398 Camellia sinensis var. sinensis HOM05D003922 ORTHO05D004492 3.0e-53 212.6 222 52.7
Actinidia27120 Actinidia chinensis HOM05D003922 ORTHO05D004492 5.2e-53 211.8 222 52.7
Lj6A217G7 Lonicera japonica HOM05D003922 ORTHO05D004492 5.2e-53 211.8 222 53.2
CSS0049854 Camellia sinensis var. sinensis HOM05D003922 ORTHO05D004492 1.2e-52 210.7 222 53.2
Nitab4.5_0004700g0050 Nicotiana tabacum HOM05D003922 ORTHO05D004492 1.2e-52 210.7 222 54.1
CSS0002835 Camellia sinensis var. sinensis HOM05D003922 ORTHO05D004492 1.5e-52 210.3 222 52.3
Solyc08g014300.4 Solanum lycopersicum HOM05D003922 ORTHO05D004492 1.5e-52 210.3 222 50.9
Sopen08g005210 Solanum pennellii HOM05D003922 ORTHO05D004492 1.5e-52 210.3 222 50.9
Migut.N03060 Erythranthe guttata HOM05D003922 ORTHO05D004492 2.6e-52 209.5 222 50.9
PGR142G3702 Punica granatum HOM05D003922 ORTHO05D004492 2.6e-52 209.5 222 52.3
Rhsim09G0008700 Rhododendron simsii HOM05D003922 ORTHO05D004492 3.4e-52 209.1 222 52.7
MSTRG.22037 Avicennia marina HOM05D003922 ORTHO05D004492 7.5e-52 208.0 222 52.3
PGSC0003DMG400016054 Solanum tuberosum HOM05D003922 ORTHO05D004492 9.8e-52 207.6 222 50.9
MSTRG.24564 Avicennia marina HOM05D003922 ORTHO05D004492 1.3e-51 207.2 222 50.5
Duzib151G1155 Durio zibethinus HOM05D003922 ORTHO05D004492 2.9e-51 206.1 219 50.2
Potri.013G127400 Populus trichocarpa HOM05D003922 ORTHO05D004492 3.7e-51 205.7 220 51.8
Eucgr.H00289 Eucalyptus grandis HOM05D003922 ORTHO05D004492 4.9e-51 205.3 222 50.5
TAR633G0046 Trochodendron aralioides HOM05D003922 ORTHO05D004492 4.9e-51 205.3 221 50.7
vmacro00688 Vaccinium macrocarpon HOM05D003922 ORTHO05D004492 4.9e-51 205.3 222 52.3
Gohir.A09G213608 Gossypium hirsutum HOM05D003922 ORTHO05D004492 1.4e-50 203.8 219 50.2
Gohir.D09G212300 Gossypium hirsutum HOM05D003922 ORTHO05D004492 1.4e-50 203.8 219 50.2
Gorai.006G232100 Gossypium raimondii HOM05D003922 ORTHO05D004492 1.4e-50 203.8 219 50.2
Duzib268G1060 Durio zibethinus HOM05D003922 ORTHO05D004492 4.1e-50 202.2 222 49.5
HanXRQChr11g0343091 Helianthus annuus HOM05D003922 ORTHO05D004492 7.0e-50 201.4 219 51.6
Manes.05G137000 Manihot esculenta HOM05D003922 ORTHO05D004492 1.2e-49 200.7 222 50.5
Lsat_1_v5_gn_1_74581 Lactuca sativa HOM05D003922 ORTHO05D004492 2.0e-49 199.9 219 50.7
Sabra13G0106500 Salix brachista HOM05D003922 ORTHO05D004492 2.0e-49 199.9 220 50.9
DCAR_005455 Daucus carota HOM05D003922 ORTHO05D004492 2.7e-49 199.5 222 50.9
PGSC0003DMG400016330 Solanum tuberosum HOM05D003922 ORTHO05D004492 4.6e-49 198.7 217 51.2
Thecc.04G164400 Theobroma cacao HOM05D003922 ORTHO05D004492 4.6e-49 198.7 219 48.9
Peaxi162Scf00075g01329 Petunia axillaris HOM05D003922 ORTHO05D004492 1.0e-48 197.6 222 50.9
Sopen06g018570 Solanum pennellii HOM05D003922 ORTHO05D004492 1.0e-48 197.6 222 50.5
SGA_v2.0_scaffold25G11004 Striga asiatica HOM05D003922 ORTHO05D004492 1.0e-48 197.6 222 48.6
Cpa.g.sc9.377 Carica papaya HOM05D003922 ORTHO05D004492 2.3e-48 196.4 222 48.6
CAN.G759.3 Capsicum annuum HOM05D003922 ORTHO05D004492 3.0e-48 196.1 222 47.7
Nn2g13969 Nelumbo nucifera HOM05D003922 ORTHO05D004492 3.9e-48 195.7 219 48.4
Hund03208 Selenicereus undatus HOM05D003922 ORTHO05D004492 8.6e-48 194.5 219 49.8
Sc19g0002260 Simmondsia chinensis HOM05D003922 ORTHO05D004492 8.6e-48 194.5 222 49.5
unitig_578.g16270 Utricularia gibba HOM05D003922 ORTHO05D004492 1.9e-47 193.4 215 47.9
Thhalv10009017m.g Eutrema salsugineum HOM05D003922 ORTHO05D004492 2.5e-47 193.0 222 46.4
TWI63G0384 Tripterygium wilfordii HOM05D003922 ORTHO05D004492 2.5e-47 193.0 222 47.7
ECA248G0756 Erigeron canadensis HOM05D003922 ORTHO05D004492 3.3e-47 192.6 219 48.9
EL10Ac3g06102 Beta vulgaris HOM05D003922 ORTHO05D004492 4.3e-47 192.2 221 48.0
BcaC07g42112 Brassica carinata HOM05D003922 ORTHO05D004492 4.3e-47 192.2 222 46.4
THA.LOC104800922 Tarenaya hassleriana HOM05D003922 ORTHO05D004492 5.6e-47 191.8 222 47.3
CARHR005250 Cardamine hirsuta HOM05D003922 ORTHO05D004492 9.5e-47 191.0 221 45.7
Cfa015673 Carpinus fangiana HOM05D003922 ORTHO05D004492 9.5e-47 191.0 222 48.2
AT1G05730 Arabidopsis thaliana HOM05D003922 ORTHO05D004492 1.2e-46 190.7 222 46.8
SGA_v2.0_scaffold19G08849 Striga asiatica HOM05D003922 ORTHO05D004492 1.2e-46 190.7 233 46.4
AL1G15640 Arabidopsis lyrata HOM05D003922 ORTHO05D004492 2.1e-46 189.9 222 46.4
A09p67310 Brassica napus HOM05D003922 ORTHO05D004492 2.1e-46 189.9 222 45.9
SalBow6G3114 Salvia bowleyana HOM05D003922 ORTHO05D004492 2.1e-46 189.9 218 49.5
THA.LOC104815872 Tarenaya hassleriana HOM05D003922 ORTHO05D004492 2.1e-46 189.9 219 47.5
Sed0023559 Sechium edule HOM05D003922 ORTHO05D004492 2.8e-46 189.5 222 46.8
Sp4g14200 Schrenkiella parvula HOM05D003922 ORTHO05D004492 3.6e-46 189.1 222 46.8
Aqoxy2G04156 Aquilegia oxysepala HOM05D003922 ORTHO05D004492 4.7e-46 188.7 223 47.1
CANSAT56G1338 Cannabis sativa HOM05D003922 ORTHO05D004492 6.2e-46 188.3 216 47.2
ClCG11G013550 Citrullus lanatus HOM05D003922 ORTHO05D004492 2.3e-45 186.4 222 47.3
Thhalv10017374m.g Eutrema salsugineum HOM05D003922 ORTHO05D004492 3.1e-45 186.0 222 45.9
Sp1g04550 Schrenkiella parvula HOM05D003922 ORTHO05D004492 3.1e-45 186.0 222 44.6
AL4G26980 Arabidopsis lyrata HOM05D003922 ORTHO05D004492 4.0e-45 185.7 222 45.0
AT2G31725 Arabidopsis thaliana HOM05D003922 ORTHO05D004492 4.0e-45 185.7 222 45.5
CsaV3_5G030170 Cucumis sativus L. HOM05D003922 ORTHO05D004492 4.0e-45 185.7 222 47.3
Aa31LG5G5270 Aethionema arabicum HOM05D003922 ORTHO05D004492 5.2e-45 185.3 222 44.6
CAN.G1401.2 Capsicum annuum HOM05D003922 ORTHO05D004492 5.2e-45 185.3 217 47.9
Ciclev10022699m.g Citrus clementina HOM05D003922 ORTHO05D004492 5.2e-45 185.3 222 47.3
MELO3C011855.2 Cucumis melo HOM05D003922 ORTHO05D004492 6.8e-45 184.9 219 47.0
PSO573G0028 Papaver somniferum HOM05D003922 ORTHO05D004492 6.8e-45 184.9 218 45.4
Atru.chr4.1453 Acer truncatum HOM05D003922 ORTHO05D004492 1.5e-44 183.7 222 46.4
CiPaw.01G168800 Carya illinoinensis HOM05D003922 ORTHO05D004492 1.5e-44 183.7 222 46.4
C04p18050 Brassica napus HOM05D003922 ORTHO05D004492 2.6e-44 183.0 222 45.0
BolC4t23353H Brassica oleracea HOM05D003922 ORTHO05D004492 2.6e-44 183.0 222 45.0
BraA09t42062Z Brassica rapa HOM05D003922 ORTHO05D004492 2.6e-44 183.0 229 44.5
BcaB02g10413 Brassica carinata HOM05D003922 ORTHO05D004492 3.4e-44 182.6 222 45.0
PSO017G0931 Papaver somniferum HOM05D003922 ORTHO05D004492 5.8e-44 181.8 218 45.4
BcaC02g11282 Brassica carinata HOM05D003922 ORTHO05D004492 1.3e-43 180.6 222 44.6
Carub.0004s1303 Capsella rubella HOM05D003922 ORTHO05D004492 3.7e-43 179.1 216 45.4
AUR62002412 Chenopodium quinoa HOM05D003922 ORTHO05D004492 3.7e-43 179.1 217 45.6
QL10p056544 Quercus lobata HOM05D003922 ORTHO05D004492 3.7e-43 179.1 221 45.7
BolC8t52690H Brassica oleracea HOM05D003922 ORTHO05D004492 4.9e-43 178.7 232 43.1
Os11g0256200 Oryza sativa ssp. japonica HOM05D003922 ORTHO05D004492 4.9e-43 178.7 217 44.2
MD04G1037100 Malus domestica HOM05D003922 ORTHO05D004492 6.4e-43 178.3 216 46.3
CARHR125410 Cardamine hirsuta HOM05D003922 ORTHO05D004492 1.9e-42 176.8 219 43.4
RcHm_v2.0_Chr4g0405841 Rosa chinensis HOM05D003922 ORTHO05D004492 1.9e-42 176.8 222 44.6
C08p51620 Brassica napus HOM05D003922 ORTHO05D004492 7.0e-42 174.9 233 42.9
Peaxi162Scf00579g00013 Petunia axillaris HOM05D003922 ORTHO05D004492 7.0e-42 174.9 217 47.0
ATR0743G180 Amborella trichopoda HOM05D003922 ORTHO05D004492 1.2e-41 174.1 210 45.2
Carub.0001s0508 Capsella rubella HOM05D003922 ORTHO05D004492 1.2e-41 174.1 222 44.1
BraA05t20315Z Brassica rapa HOM05D003922 ORTHO05D004492 1.6e-41 173.7 234 42.7
Phvul.005G007000 Phaseolus vulgaris HOM05D003922 ORTHO05D004492 2.7e-41 172.9 221 44.3
Prupe.1G185700 Prunus persica HOM05D003922 ORTHO05D004492 2.7e-41 172.9 219 45.7
Lj6A207G21 Lonicera japonica HOM05D003922 ORTHO05D004492 3.5e-41 172.6 265 42.3
COL.COLO4_38113 Corchorus olitorius HOM05D003922 ORTHO05D004492 6.0e-41 171.8 207 46.9
CDE09G1276 Ceratophyllum demersum HOM05D003922 ORTHO05D004492 2.3e-40 169.9 219 42.9
DCAR_027517 Daucus carota HOM05D003922 ORTHO05D004492 2.3e-40 169.9 221 42.5
FvH4_3g34590 Fragaria vesca HOM05D003922 ORTHO05D004492 6.6e-40 168.3 215 44.7
FAN11G1624 Fragaria x ananassa HOM05D003922 ORTHO05D004492 6.6e-40 168.3 215 44.7
FAN25G1394 Fragaria x ananassa HOM05D003922 ORTHO05D004492 6.6e-40 168.3 215 44.7
FAN02G1921 Fragaria x ananassa HOM05D003922 ORTHO05D004492 1.1e-39 167.5 217 44.2
FAN06G3125 Fragaria x ananassa HOM05D003922 ORTHO05D004492 1.1e-39 167.5 217 44.2
TPR.G16707 Trifolium pratense HOM05D003922 ORTHO05D004492 1.1e-39 167.5 221 42.1
FAN21G3935 Fragaria x ananassa HOM05D003922 ORTHO05D004492 1.5e-39 167.2 215 44.2
FAN16G1833 Fragaria x ananassa HOM05D003922 ORTHO05D004492 1.9e-39 166.8 215 44.2
Lalb_Chr18g0048821 Lupinus albus HOM05D003922 ORTHO05D004492 1.9e-39 166.8 221 43.0
Glyma.06G319900 Glycine max HOM05D003922 ORTHO05D004492 2.5e-39 166.4 221 41.6
Medtr3g009130 Medicago truncatula HOM05D003922 ORTHO05D004492 5.6e-39 165.2 221 42.1
THA.LOC104804105 Tarenaya hassleriana HOM05D003922 ORTHO05D004492 5.6e-39 165.2 224 42.9
Lj3g0023756 Lotus japonicus HOM05D003922 ORTHO05D004492 7.3e-39 164.9 221 42.1
Ca_14117_v3 Cicer arietinum L. HOM05D003922 ORTHO05D004492 9.5e-39 164.5 221 42.1
Glyma.02G058200 Glycine max HOM05D003922 ORTHO05D004492 1.6e-38 163.7 221 41.2
arahy.Tifrunner.gnm1.ann1.D9AT9V Arachis hypogaea HOM05D003922 ORTHO05D004492 2.1e-38 163.3 221 41.6
Psat5g230680 Pisum sativum HOM05D003922 ORTHO05D004492 2.1e-38 163.3 221 42.1
AT2G43720 Arabidopsis thaliana HOM05D003922 ORTHO05D004492 1.4e-37 160.6 216 43.1
Zm00001eb169120 Zea mays HOM05D003922 ORTHO05D004492 1.8e-37 160.2 211 40.8
Glyma.04G117900 Glycine max HOM05D003922 ORTHO05D004492 2.3e-37 159.8 221 40.3
VMungo1080G1004 Vigna mungo HOM05D003922 ORTHO05D004492 6.8e-37 158.3 221 40.7
CARHR138910 Cardamine hirsuta HOM05D003922 ORTHO05D004492 1.2e-36 157.5 216 41.7
Sp4g25790 Schrenkiella parvula HOM05D003922 ORTHO05D004492 2.0e-36 156.8 216 42.1
HPP92_023724 Vanilla planifolia HOM05D003922 ORTHO05D004492 4.4e-36 155.6 219 40.6
AL4G42550 Arabidopsis lyrata HOM05D003922 ORTHO05D004492 5.8e-36 155.2 216 40.7
Zm00001eb169100 Zea mays HOM05D003922 ORTHO05D004492 5.8e-36 155.2 211 39.8
BcaC02g07156 Brassica carinata HOM05D000941 ORTHO05D004492 7.5e-36 154.8 222 40.1
BolC4t28571H Brassica oleracea HOM05D003922 ORTHO05D004492 7.5e-36 154.8 222 40.1
CDE04G0234 Ceratophyllum demersum HOM05D003922 ORTHO05D004492 1.7e-35 153.7 93 77.4
Nitab4.5_0007474g0040 Nicotiana tabacum HOM05D003922 ORTHO05D004492 3.2e-34 149.4 179 48.6
A04p33020 Brassica napus HOM05D003922 ORTHO05D004492 4.1e-34 149.1 215 39.5
C04p70710 Brassica napus HOM05D003922 ORTHO05D004492 4.1e-34 149.1 215 39.5
BraA04t18761Z Brassica rapa HOM05D003922 ORTHO05D004492 4.1e-34 149.1 215 39.5
Carub.0004s2626 Capsella rubella HOM05D003922 ORTHO05D004492 5.4e-34 148.7 216 39.8
Solyc06g053490.4 Solanum lycopersicum HOM05D003922 ORTHO05D004492 9.2e-34 147.9 89 77.5
CiPaw.02G099200 Carya illinoinensis HOM05D003922 ORTHO05D004492 1.2e-33 147.5 215 39.5
BcaB06g29344 Brassica carinata HOM05D003922 ORTHO05D004492 1.6e-33 147.1 215 39.5
Nitab4.5_0000013g0490 Nicotiana tabacum HOM05D003922 ORTHO05D004492 1.6e-33 147.1 89 78.7
Thhalv10001669m.g Eutrema salsugineum HOM05D003922 ORTHO05D004492 2.1e-33 146.7 215 40.0
Haze_00850 Corylus avellana HOM05D003922 ORTHO05D004492 3.0e-32 142.9 89 73.0
MBI07_g11491_MAGBIO Magnolia biondii HOM05D003922 ORTHO05D004492 1.9e-31 140.2 214 39.7
BcaC07g42117 Brassica carinata HOM05D003922 ORTHO05D004492 5.6e-31 138.7 223 39.5
Haze_00864 Corylus avellana HOM05D003922 ORTHO05D004492 2.8e-30 136.3 89 70.8
arahy.Tifrunner.gnm1.ann1.1Q5EFH Arachis hypogaea HOM05D003922 ORTHO05D004492 3.4e-28 129.4 221 35.3
Lj3P164T1 Lonicera japonica HOM05D003922 ORTHO05D004492 4.4e-28 129.0 180 40.6
Lju359P1T4 Lonicera japonica HOM05D003922 ORTHO05D004492 4.4e-28 129.0 180 40.6
BcaC07g42114 Brassica carinata HOM05D003922 ORTHO05D004492 1.1e-26 124.4 223 35.4
arahy.Tifrunner.gnm1.ann1.H4TYTD Arachis hypogaea HOM05D003922 ORTHO05D004492 3.5e-25 119.4 221 34.8
A05p13780 Brassica napus HOM05D003922 ORTHO05D004492 3.9e-24 115.9 179 37.4
Glyma.06G288100 Glycine max HOM05D003922 ORTHO05D004492 8.6e-24 114.8 207 35.7
Glyma.06G288300 Glycine max HOM05D003922 ORTHO05D004492 8.6e-24 114.8 207 35.7
SEGI_40113 Sequoiadendron giganteum HOM05D003922 ORTHO05D004492 1.9e-23 113.6 82 57.3
Psat3g002600 Pisum sativum HOM05D003321 ORTHO05D004492 3.3e-23 112.8 94 54.3
Aa31LG1G25440 Aethionema arabicum HOM05D003922 ORTHO05D004492 3.6e-22 109.4 178 37.1
AT1G05740 Arabidopsis thaliana HOM05D003922 ORTHO05D004492 6.9e-21 105.1 101 49.5
Glyma.06G320000 Glycine max HOM05D003922 ORTHO05D004492 1.2e-20 104.4 215 30.7
Glyma.06G288000 Glycine max HOM05D003922 ORTHO05D004492 1.7e-16 90.5 221 27.6
arahy.Tifrunner.gnm1.ann1.GG9VXM Arachis hypogaea HOM05D003922 ORTHO05D004492 3.0e-16 89.7 221 32.1
Lsat_1_v5_gn_3_36701 Lactuca sativa HOM05D003922 ORTHO05D004492 4.3e-15 85.9 68 58.8
Pp3c22_16840 Physcomitrium patens HOM05D003922 ORTHO05D004492 4.8e-14 82.4 211 27.5
Carub.0001s0509 Capsella rubella HOM05D003922 ORTHO05D004492 8.1e-14 81.6 163 30.7
AagrBONN_evm.TU.Sc2ySwM_228.3693 Anthoceros agrestis HOM05D003922 ORTHO05D004492 1.4e-13 80.9 210 23.3
SMO174G0129 Selaginella moellendorffii HOM05D003922 ORTHO05D004492 3.1e-13 79.7 210 24.3
BcaB05g24674 Brassica carinata HOM05D001689 ORTHO05D004492 5.3e-13 79.0 52 65.4
arahy.Tifrunner.gnm1.ann1.DMY77W Arachis hypogaea HOM05D003922 ORTHO05D004492 5.8e-12 75.5 87 42.5
CiPaw.16G066500 Carya illinoinensis HOM05D003922 ORTHO05D004492 4.9e-11 72.4 57 61.4
BcaB05g25136 Brassica carinata HOM05D003922 ORTHO05D004492 2.4e-10 70.1 49 61.2
SMO174G0123 Selaginella moellendorffii HOM05D003922 ORTHO05D004492 1.6e-09 67.4 77 39.0
AUR62023777 Chenopodium quinoa HOM05D003922 ORTHO05D004492 1.0e-08 64.7 46 60.9
arahy.Tifrunner.gnm1.ann1.V6LTI0 Arachis hypogaea HOM05D003922 ORTHO05D004492 5.1e-08 62.4 140 30.7
Glyma.06G288200 Glycine max HOM05D003922 ORTHO05D004492 1.5e-07 60.8 221 24.0
SMO116G0121 Selaginella moellendorffii HOM05D003922 ORTHO05D004492 2.1e-06 57.0 49 42.9


User provided reference genes

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