Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu015676.1 Olea europaea HOM05D007507 ORTHO05D009420 1.1e-63 246.5 127 100.0
Oeu064800.1 Olea europaea HOM05D007507 ORTHO05D009420 2.9e-24 115.5 121 57.9
Oeu027697.1 Olea europaea HOM05D007507 ORTHO05D009420 2.7e-22 109.0 122 56.6
Cc02_g13780 Coffea canephora HOM05D007507 ORTHO05D009420 1.3e-19 100.1 117 55.6
Glyma.13G175400 Glycine max HOM05D007507 ORTHO05D009420 1.2e-17 93.6 124 46.0
Sabra04G0030100 Salix brachista HOM05D007507 ORTHO05D009420 1.2e-17 93.6 125 50.4
CSS0001598 Camellia sinensis var. sinensis HOM05D007507 ORTHO05D009420 1.5e-17 93.2 122 52.5
TAR626G1744 Trochodendron aralioides HOM05D007507 ORTHO05D009420 1.5e-17 93.2 123 47.2
Dinv17350 Davidia involucrata HOM05D007507 ORTHO05D009420 2.0e-17 92.8 123 48.8
Glyma.07G201000 Glycine max HOM05D007507 ORTHO05D009420 3.4e-17 92.0 124 43.5
QL05p042078 Quercus lobata HOM05D007507 ORTHO05D009420 3.4e-17 92.0 121 46.3
Duzib235G0685 Durio zibethinus HOM05D007507 ORTHO05D009420 4.5e-17 91.7 124 46.8
Dinv40597 Davidia involucrata HOM05D007507 ORTHO05D009420 1.0e-16 90.5 103 56.3
Hma1.2p1_0558F.1_g178550 Hydrangea macrophylla HOM05D007507 ORTHO05D009420 1.0e-16 90.5 117 47.9
Thecc.06G181600 Theobroma cacao HOM05D007507 ORTHO05D009420 2.9e-16 89.0 124 47.6
Potri.004G048201 Populus trichocarpa HOM05D007507 ORTHO05D009420 5.0e-16 88.2 125 46.4
Actinidia16570 Actinidia chinensis HOM05D007507 ORTHO05D009420 8.5e-16 87.4 122 48.4
MD05G1310700 Malus domestica HOM05D007507 ORTHO05D009420 1.4e-15 86.7 125 42.4
MD10G1289800 Malus domestica HOM05D007507 ORTHO05D009420 2.5e-15 85.9 125 40.8
GSVIVG01021107001 Vitis vinifera HOM05D007507 ORTHO05D009420 2.5e-15 85.9 125 44.0
VMungo0251G0526 Vigna mungo HOM05D007507 ORTHO05D009420 3.2e-15 85.5 124 42.7
CiPaw.10G052300 Carya illinoinensis HOM05D007507 ORTHO05D009420 4.2e-15 85.1 120 44.2
Migut.M01111 Erythranthe guttata HOM05D007507 ORTHO05D009420 4.2e-15 85.1 96 55.2
Nitab4.5_0002813g0060 Nicotiana tabacum HOM05D007507 ORTHO05D009420 4.2e-15 85.1 127 48.8
Glyma.15G077500 Glycine max HOM05D007507 ORTHO05D009420 9.4e-15 84.0 123 44.7
Migut.H01473 Erythranthe guttata HOM05D007507 ORTHO05D009420 1.2e-14 83.6 125 48.8
Glyma.13G236200 Glycine max HOM05D007507 ORTHO05D009420 1.2e-14 83.6 121 45.5
Lj4g0010126 Lotus japonicus HOM05D007507 ORTHO05D009420 1.2e-14 83.6 126 42.9
Potri.011G057400 Populus trichocarpa HOM05D007507 ORTHO05D009420 1.2e-14 83.6 125 45.6
PGSC0003DMG400031763 Solanum tuberosum HOM05D007507 ORTHO05D009420 1.2e-14 83.6 123 48.8
Gohir.A09G073500 Gossypium hirsutum HOM05D007507 ORTHO05D009420 2.1e-14 82.8 130 44.6
RcHm_v2.0_Chr5g0009091 Rosa chinensis HOM05D007507 ORTHO05D009420 2.7e-14 82.4 115 47.0
arahy.Tifrunner.gnm1.ann1.UCBT0G Arachis hypogaea HOM05D007507 ORTHO05D009420 3.6e-14 82.0 129 41.1
Prupe.4G051900 Prunus persica HOM05D007507 ORTHO05D009420 6.1e-14 81.3 116 45.7
arahy.Tifrunner.gnm1.ann1.IERL18 Arachis hypogaea HOM05D007507 ORTHO05D009420 7.9e-14 80.9 129 41.9
Gohir.D09G073200 Gossypium hirsutum HOM05D007507 ORTHO05D009420 7.9e-14 80.9 128 44.5
Gorai.006G088200 Gossypium raimondii HOM05D007507 ORTHO05D009420 7.9e-14 80.9 128 44.5
HanXRQChr04g0113131 Helianthus annuus HOM05D007507 ORTHO05D009420 7.9e-14 80.9 120 45.0
Ciclev10016932m.g Citrus clementina HOM05D007507 ORTHO05D009420 1.0e-13 80.5 101 50.5
Duzib192G0611 Durio zibethinus HOM05D007507 ORTHO05D009420 1.0e-13 80.5 126 43.7
Phvul.002G232000 Phaseolus vulgaris HOM05D007507 ORTHO05D009420 1.0e-13 80.5 118 42.4
Nitab4.5_0007893g0030 Nicotiana tabacum HOM05D007507 ORTHO05D009420 1.4e-13 80.1 127 48.0
Gohir.A05G159400 Gossypium hirsutum HOM05D007507 ORTHO05D009420 1.8e-13 79.7 126 44.4
Phvul.006G182800 Phaseolus vulgaris HOM05D007507 ORTHO05D009420 1.8e-13 79.7 104 46.2
Lalb_Chr20g0121601 Lupinus albus HOM05D007507 ORTHO05D009420 2.3e-13 79.3 123 39.0
Medtr4g088390 Medicago truncatula HOM05D007507 ORTHO05D009420 2.3e-13 79.3 122 42.6
TPR.G19926 Trifolium pratense HOM05D007507 ORTHO05D009420 2.3e-13 79.3 127 41.7
Cpa.g.sc27.9 Carica papaya HOM05D007507 ORTHO05D009420 3.9e-13 78.6 103 50.5
Gorai.009G167100 Gossypium raimondii HOM05D007507 ORTHO05D009420 6.7e-13 77.8 126 43.7
MSTRG.14710 Avicennia marina HOM05D007507 ORTHO05D009420 8.8e-13 77.4 119 49.6
Lsat_1_v5_gn_7_22681 Lactuca sativa HOM05D007507 ORTHO05D009420 1.9e-12 76.3 119 47.9
Psat7g115600 Pisum sativum HOM05D007507 ORTHO05D009420 1.9e-12 76.3 125 44.0
Sabra11G0039300 Salix brachista HOM05D007507 ORTHO05D009420 1.9e-12 76.3 125 41.6
CANSAT35G2017 Cannabis sativa HOM05D007507 ORTHO05D009420 2.5e-12 75.9 124 40.3
Medtr2g014380 Medicago truncatula HOM05D007507 ORTHO05D009420 2.5e-12 75.9 124 40.3
FAN21G1585 Fragaria x ananassa HOM05D007507 ORTHO05D009420 3.3e-12 75.5 115 42.6
Actinidia05654 Actinidia chinensis HOM05D007507 ORTHO05D009420 4.3e-12 75.1 121 43.8
Sopen02g022610 Solanum pennellii HOM05D007507 ORTHO05D009420 4.3e-12 75.1 128 45.3
Gohir.D05G162100 Gossypium hirsutum HOM05D007507 ORTHO05D009420 5.7e-12 74.7 126 42.9
FvH4_3g08680 Fragaria vesca HOM05D007507 ORTHO05D009420 9.7e-12 73.9 127 41.7
TPR.G39426 Trifolium pratense HOM05D007507 ORTHO05D009420 1.7e-11 73.2 123 37.4
arahy.Tifrunner.gnm1.ann1.26E61A Arachis hypogaea HOM05D007507 ORTHO05D009420 2.2e-11 72.8 117 41.9
VMungo0540G0304 Vigna mungo HOM05D007507 ORTHO05D009420 2.2e-11 72.8 101 45.5
Nn1g04226 Nelumbo nucifera HOM05D007507 ORTHO05D009420 2.8e-11 72.4 111 42.3
Solyc02g077720.4 Solanum lycopersicum HOM05D007507 ORTHO05D009420 2.8e-11 72.4 128 44.5
DCAR_004049 Daucus carota HOM05D007507 ORTHO05D009420 3.7e-11 72.0 118 43.2
Eucgr.E03247 Eucalyptus grandis HOM05D007507 ORTHO05D009420 3.7e-11 72.0 128 41.4
arahy.Tifrunner.gnm1.ann1.XNU6AG Arachis hypogaea HOM05D007507 ORTHO05D009420 4.8e-11 71.6 126 39.7
Manes.17G048900 Manihot esculenta HOM05D007507 ORTHO05D009420 4.8e-11 71.6 116 44.8
FAN11G0818 Fragaria x ananassa HOM05D007507 ORTHO05D009420 1.4e-10 70.1 128 41.4
TWI38G1903 Tripterygium wilfordii HOM05D007507 ORTHO05D009420 1.8e-10 69.7 95 45.3
Atru.chr10.1803 Acer truncatum HOM05D007507 ORTHO05D009420 3.1e-10 68.9 138 41.3
MBI07_g29118_MAGBIO Magnolia biondii HOM05D007507 ORTHO05D009420 4.1e-10 68.6 123 41.5
Manes.16G031300 Manihot esculenta HOM05D007507 ORTHO05D009420 1.2e-09 67.0 124 41.9
Gorai.010G158100 Gossypium raimondii HOM05D007507 ORTHO05D009420 5.9e-09 64.7 129 38.0
SalBow8G4682 Salvia bowleyana HOM05D007507 ORTHO05D009420 5.9e-09 64.7 88 52.3
Gohir.D06G135900 Gossypium hirsutum HOM05D007507 ORTHO05D009420 1.0e-08 63.9 129 36.4
Sed0011593 Sechium edule HOM05D007507 ORTHO05D009420 1.0e-08 63.9 118 40.7
DCAR_008007 Daucus carota HOM05D007507 ORTHO05D009420 1.7e-08 63.2 126 38.1
PGR042G2392 Punica granatum HOM05D007507 ORTHO05D009420 1.7e-08 63.2 122 38.5
Rhsim13G0180100 Rhododendron simsii HOM05D007507 ORTHO05D009420 3.8e-08 62.0 82 48.8
MELO3C007264.2 Cucumis melo HOM05D007507 ORTHO05D009420 1.1e-07 60.5 97 42.3
ClCG01G023220 Citrullus lanatus HOM05D007507 ORTHO05D009420 4.2e-07 58.5 96 40.6
CsaV3_6G050370 Cucumis sativus L. HOM05D007507 ORTHO05D009420 7.2e-07 57.8 109 40.4
PSO675G6999 Papaver somniferum HOM05D007507 ORTHO05D009420 9.4e-07 57.4 119 40.3
Atru.chr10.1804 Acer truncatum HOM05D007507 ORTHO05D009420 2.7e-06 55.8 125 38.4
ECA236G3296 Erigeron canadensis HOM05D007507 ORTHO05D009420 2.7e-06 55.8 59 62.7


User provided reference genes

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