Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu015581.1 Olea europaea HOM05D003644 ORTHO05D004305 6.4e-100 367.5 191 100.0
Oeu002262.2 Olea europaea HOM05D003644 ORTHO05D004305 1.0e-57 227.3 131 89.3
GSVIVG01015346001 Vitis vinifera HOM05D003644 ORTHO05D004305 1.3e-49 200.3 195 61.5
Thecc.09G105500 Theobroma cacao HOM05D003644 ORTHO05D004305 6.7e-49 198.0 197 60.9
CSS0010496 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 1.3e-47 193.7 196 60.7
CSS0033414 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 1.3e-47 193.7 196 60.7
Manes.16G112500 Manihot esculenta HOM05D003644 ORTHO05D004305 1.1e-46 190.7 194 62.9
SalBow6G0047 Salvia bowleyana HOM05D003644 ORTHO05D004305 1.1e-46 190.7 201 58.7
Haze_25785 Corylus avellana HOM05D003644 ORTHO05D004305 3.4e-45 185.7 197 58.9
Duzib150G1566 Durio zibethinus HOM05D003644 ORTHO05D004305 3.8e-44 182.2 196 58.7
CSS0008241 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 8.5e-44 181.0 199 59.8
Duzib187G1156 Durio zibethinus HOM05D003644 ORTHO05D004305 2.5e-43 179.5 202 56.4
Ciclev10010512m.g Citrus clementina HOM05D003644 ORTHO05D004305 7.2e-43 177.9 204 59.8
Manes.03G024200 Manihot esculenta HOM05D003644 ORTHO05D004305 1.2e-42 177.2 197 56.3
CiPaw.03G227900 Carya illinoinensis HOM05D003644 ORTHO05D004305 1.6e-42 176.8 198 57.1
MSTRG.6013 Avicennia marina HOM05D003644 ORTHO05D004305 3.6e-42 175.6 198 58.6
Cpa.g.sc23.57 Carica papaya HOM05D003644 ORTHO05D004305 1.0e-41 174.1 192 56.2
Dinv41640 Davidia involucrata HOM05D003644 ORTHO05D004305 6.7e-41 171.4 156 65.4
Duzib168G0231 Durio zibethinus HOM05D003644 ORTHO05D004305 1.5e-40 170.2 200 56.5
MSTRG.19571 Avicennia marina HOM05D003644 ORTHO05D004305 2.5e-40 169.5 201 55.7
Peaxi162Scf00665g00003 Petunia axillaris HOM05D003644 ORTHO05D004305 2.5e-40 169.5 196 55.6
Potri.018G084100 Populus trichocarpa HOM05D003644 ORTHO05D004305 3.3e-40 169.1 200 54.5
MBI04_g14930_MAGBIO Magnolia biondii HOM05D003644 ORTHO05D004305 7.4e-40 167.9 196 56.1
QL02p044635 Quercus lobata HOM05D003644 ORTHO05D004305 9.7e-40 167.5 206 53.4
Peaxi162Scf00231g00061 Petunia axillaris HOM05D003644 ORTHO05D004305 1.6e-39 166.8 203 57.1
Potri.006G161100 Populus trichocarpa HOM05D003644 ORTHO05D004305 2.2e-39 166.4 196 54.6
TAR624G1421 Trochodendron aralioides HOM05D003644 ORTHO05D004305 2.2e-39 166.4 194 58.2
Gorai.010G073900 Gossypium raimondii HOM05D003644 ORTHO05D004305 2.8e-39 166.0 196 59.2
Gohir.D06G063400 Gossypium hirsutum HOM05D003644 ORTHO05D004305 9.1e-38 161.0 197 58.4
VMungo0251G1747 Vigna mungo HOM05D003644 ORTHO05D004305 3.4e-37 159.1 197 51.8
Glyma.05G229100 Glycine max HOM05D003644 ORTHO05D004305 7.7e-37 157.9 197 54.3
Sabra18G0072500 Salix brachista HOM05D003644 ORTHO05D004305 7.7e-37 157.9 224 49.6
TAR636G2793 Trochodendron aralioides HOM05D003644 ORTHO05D004305 1.3e-36 157.1 196 55.6
MD02G1057600 Malus domestica HOM05D003644 ORTHO05D004305 5.0e-36 155.2 201 52.7
THA.LOC104814562 Tarenaya hassleriana HOM05D003644 ORTHO05D004305 5.0e-36 155.2 205 50.2
PGSC0003DMG400000374 Solanum tuberosum HOM05D003644 ORTHO05D004305 3.2e-35 152.5 200 53.5
Sopen12g003210 Solanum pennellii HOM05D003644 ORTHO05D004305 9.4e-35 151.0 200 53.5
Phvul.002G311400 Phaseolus vulgaris HOM05D003644 ORTHO05D004305 1.2e-34 150.6 197 50.3
Prupe.7G225200 Prunus persica HOM05D003644 ORTHO05D004305 1.6e-34 150.2 210 51.0
Glyma.09G193400 Glycine max HOM05D003644 ORTHO05D004305 2.1e-34 149.8 198 52.0
CANSAT56G0200 Cannabis sativa HOM05D003644 ORTHO05D004305 1.0e-33 147.5 222 51.4
DCAR_012057 Daucus carota HOM05D003644 ORTHO05D004305 3.0e-33 146.0 199 53.3
Gorai.001G007300 Gossypium raimondii HOM05D003644 ORTHO05D004305 6.7e-33 144.8 197 53.3
Psat1g044920 Pisum sativum HOM05D003644 ORTHO05D004305 8.8e-33 144.4 196 52.0
TWI34G1832 Tripterygium wilfordii HOM05D003644 ORTHO05D004305 2.0e-32 143.3 208 51.4
Gohir.A06G064800 Gossypium hirsutum HOM05D003644 ORTHO05D004305 4.4e-32 142.1 196 54.1
VMungo0464G0020 Vigna mungo HOM05D003644 ORTHO05D004305 7.4e-32 141.4 201 49.3
Glyma.08G036100 Glycine max HOM05D003644 ORTHO05D004305 1.3e-31 140.6 197 51.8
MD15G1192000 Malus domestica HOM05D003644 ORTHO05D004305 1.7e-31 140.2 207 51.2
Nn2g11654 Nelumbo nucifera HOM05D003644 ORTHO05D004305 2.2e-31 139.8 203 51.7
Medtr6g088280 Medicago truncatula HOM05D003644 ORTHO05D004305 2.8e-31 139.4 197 52.8
TPR.G34913 Trifolium pratense HOM05D003644 ORTHO05D004305 3.7e-31 139.0 200 51.5
Nn3g18137 Nelumbo nucifera HOM05D003644 ORTHO05D004305 6.3e-31 138.3 199 50.8
THA.LOC104804017 Tarenaya hassleriana HOM05D003644 ORTHO05D004305 1.1e-30 137.5 194 47.9
Lj2g0017641 Lotus japonicus HOM05D003644 ORTHO05D004305 1.4e-30 137.1 197 50.3
Gohir.D07G007600 Gossypium hirsutum HOM05D003644 ORTHO05D004305 1.8e-30 136.7 197 52.8
Cc06_g10070 Coffea canephora HOM05D003644 ORTHO05D004305 2.4e-30 136.3 199 50.8
Phvul.004G168350 Phaseolus vulgaris HOM05D003644 ORTHO05D004305 4.1e-30 135.6 198 48.0
Glyma.01G145600 Glycine max HOM05D003644 ORTHO05D004305 5.3e-30 135.2 201 48.3
Sed0019018 Sechium edule HOM05D003644 ORTHO05D004305 6.9e-30 134.8 205 46.8
TWI32G0193 Tripterygium wilfordii HOM05D003644 ORTHO05D004305 1.2e-29 134.0 201 49.3
Atru.chr7.1390 Acer truncatum HOM05D003644 ORTHO05D004305 2.0e-29 133.3 208 47.6
FAN19G0617 Fragaria x ananassa HOM05D003644 ORTHO05D004305 2.6e-29 132.9 206 49.5
PGSC0003DMG400003139 Solanum tuberosum HOM05D003644 ORTHO05D004305 2.6e-29 132.9 194 48.5
FvH4_1g05660 Fragaria vesca HOM05D003644 ORTHO05D004305 4.5e-29 132.1 206 49.5
FAN26G3023 Fragaria x ananassa HOM05D003644 ORTHO05D004305 1.3e-28 130.6 209 48.3
Gohir.D05G026700 Gossypium hirsutum HOM05D003644 ORTHO05D004305 2.9e-28 129.4 208 46.6
AT4G28840 Arabidopsis thaliana HOM05D003644 ORTHO05D004305 3.8e-28 129.0 206 43.7
AUR62010940 Chenopodium quinoa HOM05D003644 ORTHO05D004305 3.8e-28 129.0 201 46.8
Gohir.A07G004600 Gossypium hirsutum HOM05D003644 ORTHO05D004305 3.8e-28 129.0 187 51.9
ClCG11G002330 Citrullus lanatus HOM05D003644 ORTHO05D004305 5.0e-28 128.6 210 46.2
FAN26G0903 Fragaria x ananassa HOM05D003644 ORTHO05D004305 6.5e-28 128.3 210 47.6
CAN.G1774.6 Capsicum annuum HOM05D003644 ORTHO05D004305 8.5e-28 127.9 191 50.3
FAN28G1311 Fragaria x ananassa HOM05D003644 ORTHO05D004305 1.1e-27 127.5 217 46.5
arahy.Tifrunner.gnm1.ann1.TDG8V6 Arachis hypogaea HOM05D003644 ORTHO05D004305 1.9e-27 126.7 208 50.0
Gorai.009G026800 Gossypium raimondii HOM05D003644 ORTHO05D004305 2.5e-27 126.3 213 44.6
CsaV3_2G002110 Cucumis sativus L. HOM05D003644 ORTHO05D004305 3.2e-27 125.9 206 45.6
Lalb_Chr22g0352641 Lupinus albus HOM05D003644 ORTHO05D004305 9.4e-27 124.4 212 45.3
PGR142G1369 Punica granatum HOM05D003644 ORTHO05D004305 2.1e-26 123.2 211 48.3
Gohir.A05G025200 Gossypium hirsutum HOM05D003644 ORTHO05D004305 6.1e-26 121.7 208 46.2
Sopen07g007520 Solanum pennellii HOM05D003644 ORTHO05D004305 6.1e-26 121.7 196 47.4
ECA234G2378 Erigeron canadensis HOM05D003644 ORTHO05D004305 1.0e-25 120.9 200 47.5
ClCG06G008860 Citrullus lanatus HOM05D003644 ORTHO05D004305 1.8e-25 120.2 213 47.9
MELO3C004570.2 Cucumis melo HOM05D003644 ORTHO05D004305 2.3e-25 119.8 210 44.3
Carub.0007s1180 Capsella rubella HOM05D003644 ORTHO05D004305 6.7e-25 118.2 208 43.3
Sed0028016 Sechium edule HOM05D003644 ORTHO05D004305 6.7e-25 118.2 204 43.1
Thhalv10002311m.g Eutrema salsugineum HOM05D003644 ORTHO05D004305 8.8e-25 117.9 206 42.2
Hma1.2p1_0945F.1_g240090 Hydrangea macrophylla HOM05D003644 ORTHO05D004305 1.1e-24 117.5 198 48.5
Migut.K00491 Erythranthe guttata HOM05D003644 ORTHO05D004305 2.6e-24 116.3 195 43.6
FAN23G2152 Fragaria x ananassa HOM05D003644 ORTHO05D004305 3.3e-24 115.9 216 44.4
COL.COLO4_34805 Corchorus olitorius HOM05D003644 ORTHO05D004305 4.4e-24 115.5 206 42.7
Actinidia32668 Actinidia chinensis HOM05D003644 ORTHO05D004305 5.7e-24 115.2 144 51.4
BcaC06g32601 Brassica carinata HOM05D003644 ORTHO05D004305 1.3e-23 114.0 198 41.9
AL3G48010 Arabidopsis lyrata HOM05D003644 ORTHO05D004305 2.8e-23 112.8 201 41.3
arahy.Tifrunner.gnm1.ann1.X7P2RE Arachis hypogaea HOM05D003644 ORTHO05D004305 2.8e-23 112.8 151 51.7
BcaC07g41224 Brassica carinata HOM05D003644 ORTHO05D004305 2.8e-23 112.8 203 41.9
C08p42300 Brassica napus HOM05D003644 ORTHO05D004305 2.8e-23 112.8 203 41.4
BolC8t51790H Brassica oleracea HOM05D003644 ORTHO05D004305 2.8e-23 112.8 203 41.4
BolC7t46126H Brassica oleracea HOM05D003644 ORTHO05D004305 6.3e-23 111.7 200 41.5
A09p59020 Brassica napus HOM05D003644 ORTHO05D004305 8.2e-23 111.3 203 42.4
BraA09t41288Z Brassica rapa HOM05D003644 ORTHO05D004305 8.2e-23 111.3 203 42.4
A03p58450 Brassica napus HOM05D003644 ORTHO05D004305 1.1e-22 110.9 200 41.5
Hund09225 Selenicereus undatus HOM05D003644 ORTHO05D004305 1.1e-22 110.9 204 43.6
A01p09070 Brassica napus HOM05D003644 ORTHO05D004305 1.8e-22 110.2 199 41.2
C07p56470 Brassica napus HOM05D003644 ORTHO05D004305 1.8e-22 110.2 198 41.4
Sp3g33380 Schrenkiella parvula HOM05D003644 ORTHO05D004305 1.8e-22 110.2 208 40.4
Lalb_Chr16g0388081 Lupinus albus HOM05D003644 ORTHO05D004305 3.1e-22 109.4 107 63.6
Actinidia20403 Actinidia chinensis HOM05D003644 ORTHO05D004305 4.1e-22 109.0 195 46.7
C01p10620 Brassica napus HOM05D003644 ORTHO05D004305 4.1e-22 109.0 196 40.3
BraA01t00855Z Brassica rapa HOM05D003644 ORTHO05D004305 4.1e-22 109.0 196 40.3
BolC1t01024H Brassica oleracea HOM05D003644 ORTHO05D004305 5.3e-22 108.6 196 40.8
CsaV3_1G021830 Cucumis sativus L. HOM05D003644 ORTHO05D004305 5.3e-22 108.6 205 44.4
Sed0013314 Sechium edule HOM05D003644 ORTHO05D004305 7.0e-22 108.2 198 44.9
MELO3C024703.2 Cucumis melo HOM05D003644 ORTHO05D004305 9.1e-22 107.8 206 44.7
RcHm_v2.0_Chr2g0091291 Rosa chinensis HOM05D003644 ORTHO05D004305 1.2e-21 107.5 164 50.0
CARHR110580 Cardamine hirsuta HOM05D003644 ORTHO05D004305 4.5e-21 105.5 201 38.3
Actinidia09436 Actinidia chinensis HOM05D003644 ORTHO05D004305 7.7e-21 104.8 208 42.8
HanXRQChr12g0358181 Helianthus annuus HOM05D003644 ORTHO05D004305 7.7e-21 104.8 191 41.4
Aa31LG2G21540 Aethionema arabicum HOM05D003644 ORTHO05D004305 2.2e-20 103.2 176 41.5
arahy.Tifrunner.gnm1.ann1.XM0XDL Arachis hypogaea HOM05D003644 ORTHO05D004305 2.9e-20 102.8 213 39.4
EL10Ac8g18428 Beta vulgaris HOM05D003644 ORTHO05D004305 2.9e-20 102.8 198 41.4
Nitab4.5_0014820g0010 Nicotiana tabacum HOM05D003644 ORTHO05D004305 2.9e-20 102.8 147 51.0
Hund26238 Selenicereus undatus HOM05D003644 ORTHO05D004305 8.5e-20 101.3 199 44.7
BcaC09g51666 Brassica carinata HOM05D003644 ORTHO05D004305 3.2e-19 99.4 176 41.5
Lsat_1_v5_gn_8_96040 Lactuca sativa HOM05D003644 ORTHO05D004305 3.2e-19 99.4 156 48.1
PSO782G2161 Papaver somniferum HOM05D003644 ORTHO05D004305 3.2e-19 99.4 208 39.4
BcaNung01359 Brassica carinata HOM05D003644 ORTHO05D004305 7.2e-19 98.2 187 39.6
Thhalv10026355m.g Eutrema salsugineum HOM05D003644 ORTHO05D004305 7.2e-19 98.2 196 37.2
Sp7g26840 Schrenkiella parvula HOM05D003644 ORTHO05D004305 7.2e-19 98.2 200 39.5
Solyc12g007240.3 Solanum lycopersicum HOM05D003644 ORTHO05D004305 7.2e-19 98.2 144 48.6
Lalb_Chr05g0223051 Lupinus albus HOM05D003644 ORTHO05D004305 9.4e-19 97.8 170 44.1
Hund09226 Selenicereus undatus HOM05D003644 ORTHO05D004305 9.4e-19 97.8 191 40.8
Aqoxy7G01525 Aquilegia oxysepala HOM05D003644 ORTHO05D004305 1.6e-18 97.1 194 42.8
PSO566G0277 Papaver somniferum HOM05D003644 ORTHO05D004305 1.6e-18 97.1 208 39.4
HanXRQChr14g0449921 Helianthus annuus HOM05D003644 ORTHO05D004305 6.1e-18 95.1 191 40.8
BcaNung04091 Brassica carinata HOM05D003644 ORTHO05D004305 4.0e-17 92.4 186 40.3
PGR102G0050 Punica granatum HOM05D003644 ORTHO05D004305 5.2e-17 92.0 212 42.5
DCAR_010477 Daucus carota HOM05D003644 ORTHO05D004305 6.7e-17 91.7 203 40.4
BcaC07g41225 Brassica carinata HOM05D003644 ORTHO05D004305 1.2e-16 90.9 184 37.5
C09p15050 Brassica napus HOM05D003644 ORTHO05D004305 3.3e-16 89.4 184 38.0
BolC7t40541H Brassica oleracea HOM05D003644 ORTHO05D004305 3.3e-16 89.4 203 41.9
Carub.0003s3436 Capsella rubella HOM05D003644 ORTHO05D004305 3.3e-16 89.4 182 37.9
BcaB08g34898 Brassica carinata HOM05D003644 ORTHO05D004305 7.5e-16 88.2 187 38.0
A07p00580 Brassica napus HOM05D003644 ORTHO05D004305 9.7e-16 87.8 201 38.3
Rhsim05G0043500 Rhododendron simsii HOM05D003644 ORTHO05D004305 1.3e-15 87.4 207 38.6
Sc18g0001380 Simmondsia chinensis HOM05D003644 ORTHO05D004305 2.8e-15 86.3 200 37.0
A09p12690 Brassica napus HOM05D003644 ORTHO05D004305 8.2e-15 84.7 183 37.2
COL.COLO4_17464 Corchorus olitorius HOM05D003644 ORTHO05D004305 1.8e-14 83.6 172 39.0
Oeu018442.1 Olea europaea HOM05D003644 ORTHO05D004305 4.1e-14 82.4 109 56.0
Zm00001eb156860 Zea mays HOM05D003644 ORTHO05D004305 7.0e-14 81.6 201 37.8
BcaC04g22808 Brassica carinata HOM05D003644 ORTHO05D004305 1.6e-13 80.5 181 37.6
BolC9t54408H Brassica oleracea HOM05D003644 ORTHO05D004305 1.6e-13 80.5 181 37.6
Aa31LG8G17030 Aethionema arabicum HOM05D003644 ORTHO05D004305 2.0e-13 80.1 159 39.6
Sc08g0007690 Simmondsia chinensis HOM05D003644 ORTHO05D004305 2.7e-13 79.7 201 37.8
C07p01040 Brassica napus HOM05D003644 ORTHO05D004305 4.5e-13 79.0 211 37.9
BcaC06g36690 Brassica carinata HOM05D003644 ORTHO05D004305 7.7e-13 78.2 112 50.0
BcaB03g16807 Brassica carinata HOM05D003644 ORTHO05D004305 1.3e-12 77.4 201 36.8
AT2G20080 Arabidopsis thaliana HOM05D003644 ORTHO05D004305 1.7e-12 77.0 203 33.5
arahy.Tifrunner.gnm1.ann1.R9ZCFD Arachis hypogaea HOM05D003644 ORTHO05D004305 5.0e-12 75.5 170 38.2
Zm00001eb360290 Zea mays HOM05D003644 ORTHO05D004305 5.0e-12 75.5 206 39.8
Nitab4.5_0002431g0010 Nicotiana tabacum HOM05D003644 ORTHO05D004305 6.5e-12 75.1 88 56.8
TPR.G23503 Trifolium pratense HOM05D003644 ORTHO05D004305 6.5e-12 75.1 165 40.6
unitig_578.g15927 Utricularia gibba HOM05D003644 ORTHO05D004305 6.5e-12 75.1 131 41.2
BraA07t27854Z Brassica rapa HOM05D003644 ORTHO05D004305 1.5e-11 73.9 112 48.2
Lsat_1_v5_gn_5_147641 Lactuca sativa HOM05D003644 ORTHO05D004305 1.5e-11 73.9 131 45.0
BraA09t36915Z Brassica rapa HOM05D003644 ORTHO05D004305 1.2e-10 70.9 183 33.3
Nitab4.5_0001004g0030 Nicotiana tabacum HOM05D003644 ORTHO05D004305 1.2e-10 70.9 122 46.7
AL7G23640 Arabidopsis lyrata HOM05D003644 ORTHO05D004305 6.1e-10 68.6 111 42.3
Sc08g0007700 Simmondsia chinensis HOM05D003644 ORTHO05D004305 2.3e-09 66.6 158 35.4
Eucgr.C01280 Eucalyptus grandis HOM05D003644 ORTHO05D004305 3.0e-09 66.2 201 34.3
Os01g0676900 Oryza sativa ssp. japonica HOM05D003644 ORTHO05D004305 3.0e-09 66.2 200 37.5
Ah.09g230900 Amaranthus hybridus HOM05D003644 ORTHO05D004305 8.8e-09 64.7 216 33.3
HPP92_024624 Vanilla planifolia HOM05D003644 ORTHO05D004305 2.0e-08 63.5 190 35.3
CARHR236630 Cardamine hirsuta HOM05D003644 ORTHO05D004305 4.4e-08 62.4 65 56.9
HPP92_019983 Vanilla planifolia HOM05D003644 ORTHO05D004305 7.5e-08 61.6 197 33.0
Zm00001eb343410 Zea mays HOM05D003644 ORTHO05D004305 9.8e-08 61.2 184 35.3
Psat7g014640 Pisum sativum HOM05D003644 ORTHO05D004305 2.2e-07 60.1 162 38.3
Solyc07g018370.3 Solanum lycopersicum HOM05D003644 ORTHO05D004305 3.7e-07 59.3 115 42.6
Os05g0559316 Oryza sativa ssp. japonica HOM05D003644 ORTHO05D004305 4.8e-07 58.9 86 50.0
BcaB03g16801 Brassica carinata HOM05D003644 ORTHO05D004305 6.3e-07 58.5 50 64.0


User provided reference genes

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